EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000021943 (Gene tree)
Gene ID: 101997158
Gene Symbol: Lsm10
Alias: -
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 2712 bases
Position: chr10:58503621-58506332
Accession: 101997158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000026002	LSM	PF01423.22	4.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000029876	-	917	XM_005353253	ENSMOCP00000026002	122 (aa)	XP_005353310	UPI00038C135F

Gene Model

Click here to download ENSMOCG00000021943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000021943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000021943	Lsm10	56	31.429	ENSMOCG00000015306	Lsm2	74	31.429
ENSMOCG00000021943	Lsm10	57	30.000	ENSMOCG00000020861	Lsm4	61	30.208

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000021943	Lsm10	98	90.833	ENSG00000181817	LSM10	98	90.833	Homo_sapiens
ENSMOCG00000021943	Lsm10	99	90.083	ENSAMEG00000019854	LSM10	98	90.083	Ailuropoda_melanoleuca
ENSMOCG00000021943	Lsm10	97	66.949	ENSACIG00000015420	oscp1a	78	66.949	Amphilophus_citrinellus
ENSMOCG00000021943	Lsm10	94	69.565	ENSAOCG00000014654	-	95	69.565	Amphiprion_ocellaris
ENSMOCG00000021943	Lsm10	94	69.565	ENSAOCG00000015618	LSM10	95	69.565	Amphiprion_ocellaris
ENSMOCG00000021943	Lsm10	91	66.667	ENSAOCG00000015607	LSM10	86	66.667	Amphiprion_ocellaris
ENSMOCG00000021943	Lsm10	91	66.667	ENSAPEG00000021851	LSM10	86	66.667	Amphiprion_percula
ENSMOCG00000021943	Lsm10	94	69.565	ENSAPEG00000021845	-	95	69.565	Amphiprion_percula
ENSMOCG00000021943	Lsm10	92	63.393	ENSATEG00000006310	oscp1a	83	63.393	Anabas_testudineus
ENSMOCG00000021943	Lsm10	96	69.231	ENSACAG00000001231	LSM10	95	69.231	Anolis_carolinensis
ENSMOCG00000021943	Lsm10	98	90.000	ENSANAG00000031489	-	98	90.000	Aotus_nancymaae
ENSMOCG00000021943	Lsm10	98	91.667	ENSANAG00000018759	-	98	91.667	Aotus_nancymaae
ENSMOCG00000021943	Lsm10	95	67.241	ENSACLG00000004728	oscp1a	94	67.241	Astatotilapia_calliptera
ENSMOCG00000021943	Lsm10	98	66.387	ENSAMXG00000025301	oscp1a	98	66.387	Astyanax_mexicanus
ENSMOCG00000021943	Lsm10	98	89.167	ENSBTAG00000024096	LSM10	98	89.167	Bos_taurus
ENSMOCG00000021943	Lsm10	98	90.833	ENSCJAG00000044880	LSM10	98	90.833	Callithrix_jacchus
ENSMOCG00000021943	Lsm10	99	93.388	ENSCAFG00000003382	LSM10	98	93.388	Canis_familiaris
ENSMOCG00000021943	Lsm10	99	93.388	ENSCAFG00020008920	LSM10	98	93.388	Canis_lupus_dingo
ENSMOCG00000021943	Lsm10	98	89.167	ENSCHIG00000009398	LSM10	98	89.167	Capra_hircus
ENSMOCG00000021943	Lsm10	99	89.256	ENSCAPG00000012567	LSM10	98	89.256	Cavia_aperea
ENSMOCG00000021943	Lsm10	99	89.256	ENSCPOG00000039302	LSM10	98	89.256	Cavia_porcellus
ENSMOCG00000021943	Lsm10	98	89.167	ENSCCAG00000008378	-	98	89.167	Cebus_capucinus
ENSMOCG00000021943	Lsm10	98	91.667	ENSCCAG00000018913	-	98	91.667	Cebus_capucinus
ENSMOCG00000021943	Lsm10	98	92.500	ENSCATG00000006589	LSM10	98	92.500	Cercocebus_atys
ENSMOCG00000021943	Lsm10	99	90.909	ENSCLAG00000008633	LSM10	98	90.909	Chinchilla_lanigera
ENSMOCG00000021943	Lsm10	98	92.500	ENSCSAG00000000134	LSM10	98	92.500	Chlorocebus_sabaeus
ENSMOCG00000021943	Lsm10	99	90.244	ENSCHOG00000008615	LSM10	98	90.244	Choloepus_hoffmanni
ENSMOCG00000021943	Lsm10	84	32.353	ENSCSAVG00000001896	-	87	32.353	Ciona_savignyi
ENSMOCG00000021943	Lsm10	98	92.500	ENSCANG00000019928	LSM10	98	92.500	Colobus_angolensis_palliatus
ENSMOCG00000021943	Lsm10	94	87.179	ENSCGRG00001022673	-	94	87.179	Cricetulus_griseus_chok1gshd
ENSMOCG00000021943	Lsm10	99	98.347	ENSCGRG00001004317	-	99	98.347	Cricetulus_griseus_chok1gshd
ENSMOCG00000021943	Lsm10	99	98.347	ENSCGRG00000014935	-	99	98.347	Cricetulus_griseus_crigri
ENSMOCG00000021943	Lsm10	94	87.179	ENSCGRG00000015514	-	94	87.179	Cricetulus_griseus_crigri
ENSMOCG00000021943	Lsm10	95	62.931	ENSCSEG00000010374	oscp1a	77	63.478	Cynoglossus_semilaevis
ENSMOCG00000021943	Lsm10	98	64.706	ENSCVAG00000001536	oscp1a	90	64.706	Cyprinodon_variegatus
ENSMOCG00000021943	Lsm10	99	70.248	ENSDARG00000101222	oscp1a	100	70.248	Danio_rerio
ENSMOCG00000021943	Lsm10	70	70.588	ENSDARG00000109563	CABZ01074453.1	99	70.588	Danio_rerio
ENSMOCG00000021943	Lsm10	98	93.333	ENSDNOG00000036662	LSM10	98	93.333	Dasypus_novemcinctus
ENSMOCG00000021943	Lsm10	99	92.562	ENSDORG00000007579	Lsm10	98	92.562	Dipodomys_ordii
ENSMOCG00000021943	Lsm10	95	31.624	FBgn0033554	Lsm10	82	31.624	Drosophila_melanogaster
ENSMOCG00000021943	Lsm10	99	90.083	ENSETEG00000005703	LSM10	98	90.083	Echinops_telfairi
ENSMOCG00000021943	Lsm10	100	51.639	ENSEBUG00000001312	oscp1a	100	51.639	Eptatretus_burgeri
ENSMOCG00000021943	Lsm10	99	93.388	ENSEASG00005012194	LSM10	98	93.388	Equus_asinus_asinus
ENSMOCG00000021943	Lsm10	99	94.215	ENSECAG00000005071	LSM10	98	94.215	Equus_caballus
ENSMOCG00000021943	Lsm10	99	91.736	ENSEEUG00000012032	LSM10	98	91.736	Erinaceus_europaeus
ENSMOCG00000021943	Lsm10	99	66.942	ENSELUG00000007452	oscp1a	99	66.942	Esox_lucius
ENSMOCG00000021943	Lsm10	96	72.650	ENSFALG00000000851	LSM10	95	72.650	Ficedula_albicollis
ENSMOCG00000021943	Lsm10	99	87.603	ENSFDAG00000021056	LSM10	98	87.603	Fukomys_damarensis
ENSMOCG00000021943	Lsm10	89	68.182	ENSFHEG00000001058	oscp1a	95	68.182	Fundulus_heteroclitus
ENSMOCG00000021943	Lsm10	87	66.038	ENSGMOG00000019832	oscp1a	89	66.038	Gadus_morhua
ENSMOCG00000021943	Lsm10	100	73.770	ENSGALG00000002127	LSM10	99	73.770	Gallus_gallus
ENSMOCG00000021943	Lsm10	96	60.833	ENSGAFG00000016445	oscp1a	96	60.833	Gambusia_affinis
ENSMOCG00000021943	Lsm10	95	64.655	ENSGACG00000002329	oscp1a	95	64.655	Gasterosteus_aculeatus
ENSMOCG00000021943	Lsm10	100	73.770	ENSGAGG00000024848	LSM10	99	73.770	Gopherus_agassizii
ENSMOCG00000021943	Lsm10	98	92.500	ENSGGOG00000003556	LSM10	98	92.500	Gorilla_gorilla
ENSMOCG00000021943	Lsm10	95	67.241	ENSHBUG00000001722	oscp1a	94	67.241	Haplochromis_burtoni
ENSMOCG00000021943	Lsm10	99	88.430	ENSHGLG00000011625	LSM10	98	88.430	Heterocephalus_glaber_female
ENSMOCG00000021943	Lsm10	99	88.430	ENSHGLG00100001769	LSM10	98	88.430	Heterocephalus_glaber_male
ENSMOCG00000021943	Lsm10	86	68.571	ENSIPUG00000005808	oscp1a	91	68.571	Ictalurus_punctatus
ENSMOCG00000021943	Lsm10	99	91.736	ENSSTOG00000000606	LSM10	98	91.736	Ictidomys_tridecemlineatus
ENSMOCG00000021943	Lsm10	95	64.655	ENSKMAG00000012143	oscp1a	96	64.655	Kryptolebias_marmoratus
ENSMOCG00000021943	Lsm10	98	65.000	ENSLBEG00000017764	oscp1a	98	65.000	Labrus_bergylta
ENSMOCG00000021943	Lsm10	99	72.727	ENSLACG00000015904	LSM10	93	72.727	Latimeria_chalumnae
ENSMOCG00000021943	Lsm10	100	69.672	ENSLOCG00000018277	oscp1a	100	69.672	Lepisosteus_oculatus
ENSMOCG00000021943	Lsm10	98	94.167	ENSLAFG00000009600	LSM10	98	94.167	Loxodonta_africana
ENSMOCG00000021943	Lsm10	98	92.500	ENSMFAG00000009115	LSM10	98	92.500	Macaca_fascicularis
ENSMOCG00000021943	Lsm10	98	92.500	ENSMMUG00000017338	LSM10	98	92.500	Macaca_mulatta
ENSMOCG00000021943	Lsm10	98	92.500	ENSMNEG00000020023	LSM10	98	92.500	Macaca_nemestrina
ENSMOCG00000021943	Lsm10	98	92.500	ENSMLEG00000025150	LSM10	98	92.500	Mandrillus_leucophaeus
ENSMOCG00000021943	Lsm10	98	64.167	ENSMAMG00000004427	oscp1a	98	64.167	Mastacembelus_armatus
ENSMOCG00000021943	Lsm10	95	67.241	ENSMZEG00005026307	oscp1a	94	67.241	Maylandia_zebra
ENSMOCG00000021943	Lsm10	100	72.951	ENSMGAG00000015707	LSM10	99	72.951	Meleagris_gallopavo
ENSMOCG00000021943	Lsm10	99	98.347	ENSMAUG00000016624	Lsm10	99	98.347	Mesocricetus_auratus
ENSMOCG00000021943	Lsm10	91	67.568	ENSMMOG00000013597	oscp1a	83	67.568	Mola_mola
ENSMOCG00000021943	Lsm10	99	82.645	ENSMODG00000023328	LSM10	98	82.645	Monodelphis_domestica
ENSMOCG00000021943	Lsm10	57	59.459	ENSMALG00000012661	oscp1a	58	59.459	Monopterus_albus
ENSMOCG00000021943	Lsm10	99	95.041	MGP_CAROLIEiJ_G0026467	Lsm10	99	95.041	Mus_caroli
ENSMOCG00000021943	Lsm10	99	95.868	ENSMUSG00000050188	Lsm10	99	95.868	Mus_musculus
ENSMOCG00000021943	Lsm10	99	95.868	MGP_PahariEiJ_G0028798	Lsm10	99	95.868	Mus_pahari
ENSMOCG00000021943	Lsm10	99	95.868	MGP_SPRETEiJ_G0027446	Lsm10	99	95.868	Mus_spretus
ENSMOCG00000021943	Lsm10	99	93.388	ENSMPUG00000018593	LSM10	98	93.388	Mustela_putorius_furo
ENSMOCG00000021943	Lsm10	99	87.603	ENSMLUG00000023895	LSM10	98	87.603	Myotis_lucifugus
ENSMOCG00000021943	Lsm10	100	94.262	ENSNGAG00000015011	Lsm10	99	94.262	Nannospalax_galili
ENSMOCG00000021943	Lsm10	95	68.103	ENSNBRG00000014306	oscp1a	94	68.103	Neolamprologus_brichardi
ENSMOCG00000021943	Lsm10	98	92.500	ENSNLEG00000033754	LSM10	98	92.500	Nomascus_leucogenys
ENSMOCG00000021943	Lsm10	99	82.645	ENSMEUG00000006313	LSM10	98	82.645	Notamacropus_eugenii
ENSMOCG00000021943	Lsm10	100	90.164	ENSOPRG00000001699	LSM10	99	90.164	Ochotona_princeps
ENSMOCG00000021943	Lsm10	99	90.909	ENSODEG00000019161	LSM10	98	90.909	Octodon_degus
ENSMOCG00000021943	Lsm10	95	68.103	ENSONIG00000020904	oscp1a	95	68.103	Oreochromis_niloticus
ENSMOCG00000021943	Lsm10	99	76.033	ENSOANG00000002066	LSM10	98	76.033	Ornithorhynchus_anatinus
ENSMOCG00000021943	Lsm10	99	89.256	ENSOCUG00000005333	LSM10	98	89.256	Oryctolagus_cuniculus
ENSMOCG00000021943	Lsm10	97	66.102	ENSORLG00000009504	oscp1a	98	66.102	Oryzias_latipes
ENSMOCG00000021943	Lsm10	97	66.102	ENSORLG00020016201	oscp1a	98	66.102	Oryzias_latipes_hni
ENSMOCG00000021943	Lsm10	97	66.102	ENSORLG00015007794	oscp1a	97	66.102	Oryzias_latipes_hsok
ENSMOCG00000021943	Lsm10	99	90.909	ENSOGAG00000002653	LSM10	98	90.909	Otolemur_garnettii
ENSMOCG00000021943	Lsm10	98	89.167	ENSOARG00000009596	LSM10	98	89.167	Ovis_aries
ENSMOCG00000021943	Lsm10	98	90.833	ENSPPAG00000023465	LSM10	98	90.833	Pan_paniscus
ENSMOCG00000021943	Lsm10	99	93.388	ENSPPRG00000014619	LSM10	98	93.388	Panthera_pardus
ENSMOCG00000021943	Lsm10	99	93.388	ENSPTIG00000004613	LSM10	98	93.388	Panthera_tigris_altaica
ENSMOCG00000021943	Lsm10	98	90.833	ENSPTRG00000000539	LSM10	98	90.833	Pan_troglodytes
ENSMOCG00000021943	Lsm10	98	92.500	ENSPANG00000023172	LSM10	98	92.500	Papio_anubis
ENSMOCG00000021943	Lsm10	98	66.667	ENSPKIG00000003728	oscp1a	97	66.667	Paramormyrops_kingsleyae
ENSMOCG00000021943	Lsm10	99	73.554	ENSPSIG00000000590	LSM10	98	73.554	Pelodiscus_sinensis
ENSMOCG00000021943	Lsm10	62	65.789	ENSPMGG00000015718	oscp1a	99	65.789	Periophthalmus_magnuspinnatus
ENSMOCG00000021943	Lsm10	84	84.466	ENSPCIG00000014865	LSM10	76	84.466	Phascolarctos_cinereus
ENSMOCG00000021943	Lsm10	92	68.750	ENSPFOG00000020490	oscp1a	95	68.750	Poecilia_formosa
ENSMOCG00000021943	Lsm10	92	68.750	ENSPLAG00000016537	oscp1a	85	68.750	Poecilia_latipinna
ENSMOCG00000021943	Lsm10	89	69.444	ENSPMEG00000000174	oscp1a	94	69.444	Poecilia_mexicana
ENSMOCG00000021943	Lsm10	92	67.857	ENSPREG00000009899	oscp1a	85	67.857	Poecilia_reticulata
ENSMOCG00000021943	Lsm10	98	91.667	ENSPPYG00000001539	LSM10	98	91.667	Pongo_abelii
ENSMOCG00000021943	Lsm10	97	92.373	ENSPCAG00000002520	LSM10	97	92.373	Procavia_capensis
ENSMOCG00000021943	Lsm10	99	88.430	ENSPVAG00000008644	LSM10	98	88.430	Pteropus_vampyrus
ENSMOCG00000021943	Lsm10	95	67.241	ENSPNYG00000003138	oscp1a	94	67.241	Pundamilia_nyererei
ENSMOCG00000021943	Lsm10	97	66.102	ENSPNAG00000028829	oscp1a	98	66.102	Pygocentrus_nattereri
ENSMOCG00000021943	Lsm10	99	96.694	ENSRNOG00000025716	Lsm10	99	96.694	Rattus_norvegicus
ENSMOCG00000021943	Lsm10	98	92.500	ENSRBIG00000001561	LSM10	98	92.500	Rhinopithecus_bieti
ENSMOCG00000021943	Lsm10	98	92.500	ENSRROG00000011414	LSM10	98	92.500	Rhinopithecus_roxellana
ENSMOCG00000021943	Lsm10	98	91.667	ENSSBOG00000036413	-	98	91.667	Saimiri_boliviensis_boliviensis
ENSMOCG00000021943	Lsm10	99	81.818	ENSSHAG00000018056	LSM10	98	81.818	Sarcophilus_harrisii
ENSMOCG00000021943	Lsm10	99	65.289	ENSSFOG00015019954	lsm10	99	65.289	Scleropages_formosus
ENSMOCG00000021943	Lsm10	94	66.087	ENSSMAG00000001297	oscp1a	98	66.087	Scophthalmus_maximus
ENSMOCG00000021943	Lsm10	95	63.793	ENSSDUG00000007090	oscp1a	94	63.793	Seriola_dumerili
ENSMOCG00000021943	Lsm10	95	64.655	ENSSLDG00000000800	oscp1a	96	64.655	Seriola_lalandi_dorsalis
ENSMOCG00000021943	Lsm10	99	88.618	ENSSARG00000004211	LSM10	98	90.244	Sorex_araneus
ENSMOCG00000021943	Lsm10	95	66.379	ENSSPAG00000009229	oscp1a	96	66.379	Stegastes_partitus
ENSMOCG00000021943	Lsm10	98	90.000	ENSSSCG00000038916	LSM10	98	90.000	Sus_scrofa
ENSMOCG00000021943	Lsm10	97	72.881	ENSTGUG00000001602	-	97	72.881	Taeniopygia_guttata
ENSMOCG00000021943	Lsm10	99	71.074	ENSTGUG00000001600	-	99	71.074	Taeniopygia_guttata
ENSMOCG00000021943	Lsm10	95	67.241	ENSTRUG00000010531	oscp1a	94	67.241	Takifugu_rubripes
ENSMOCG00000021943	Lsm10	98	94.167	ENSTBEG00000016674	LSM10	98	94.167	Tupaia_belangeri
ENSMOCG00000021943	Lsm10	99	90.909	ENSUAMG00000020265	LSM10	98	90.909	Ursus_americanus
ENSMOCG00000021943	Lsm10	99	90.909	ENSUMAG00000001438	LSM10	56	90.909	Ursus_maritimus
ENSMOCG00000021943	Lsm10	99	93.388	ENSVVUG00000023209	LSM10	98	93.388	Vulpes_vulpes
ENSMOCG00000021943	Lsm10	99	69.421	ENSXETG00000027631	lsm10	98	69.421	Xenopus_tropicalis
ENSMOCG00000021943	Lsm10	94	65.217	ENSXCOG00000018776	oscp1a	72	65.217	Xiphophorus_couchianus
ENSMOCG00000021943	Lsm10	96	64.167	ENSXMAG00000019963	oscp1a	96	64.167	Xiphophorus_maculatus