EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000022038 (Gene tree)
Gene ID: 101999697
Gene Symbol: Sf1
Alias: CW17R|MZFM|WBP4|Zfp162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 14316 bases
Position: chr8:41146775-41161090
Accession: 101999697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000026134	KH_1	PF00013.29	2.2e-07	1	1
ENSMOCP00000026133	KH_1	PF00013.29	2.5e-07	1	1
ENSMOCP00000026134	zf-CCHC	PF00098.23	0.00013	1	1
ENSMOCP00000026133	zf-CCHC	PF00098.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000030008	-	3042	XM_005351803	ENSMOCP00000026133	638 (aa)	XP_005351860	UPI00038C16F5
ENSMOCT00000030009	-	2841	XM_005351807	ENSMOCP00000026134	571 (aa)	XP_005351864	UPI00038BDCFC

Gene Model

Click here to download ENSMOCG00000022038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000022038's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000022038	Sf1	66	80.928	ENSAPOG00000012341	sf1	60	76.047	Acanthochromis_polyacanthus
ENSMOCG00000022038	Sf1	99	90.980	ENSAMEG00000017828	SF1	83	99.062	Ailuropoda_melanoleuca
ENSMOCG00000022038	Sf1	65	83.245	ENSACIG00000016514	sf1	62	78.282	Amphilophus_citrinellus
ENSMOCG00000022038	Sf1	66	80.412	ENSAOCG00000010934	sf1	61	76.112	Amphiprion_ocellaris
ENSMOCG00000022038	Sf1	66	80.412	ENSAPEG00000009498	sf1	61	76.112	Amphiprion_percula
ENSMOCG00000022038	Sf1	65	82.105	ENSATEG00000001894	sf1	60	77.566	Anabas_testudineus
ENSMOCG00000022038	Sf1	92	87.521	ENSANAG00000022607	-	97	86.735	Aotus_nancymaae
ENSMOCG00000022038	Sf1	100	99.060	ENSANAG00000026664	-	100	99.060	Aotus_nancymaae
ENSMOCG00000022038	Sf1	64	84.824	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSMOCG00000022038	Sf1	64	86.096	ENSAMXG00000003630	sf1	50	79.462	Astyanax_mexicanus
ENSMOCG00000022038	Sf1	94	98.998	ENSBTAG00000001035	SF1	94	98.998	Bos_taurus
ENSMOCG00000022038	Sf1	100	99.216	ENSCJAG00000002780	SF1	100	99.216	Callithrix_jacchus
ENSMOCG00000022038	Sf1	100	99.216	ENSCAFG00000014239	SF1	100	99.216	Canis_familiaris
ENSMOCG00000022038	Sf1	100	99.216	ENSCAFG00020014381	SF1	100	99.216	Canis_lupus_dingo
ENSMOCG00000022038	Sf1	94	98.998	ENSCHIG00000025867	SF1	97	98.866	Capra_hircus
ENSMOCG00000022038	Sf1	53	98.566	ENSTSYG00000033618	SF1	88	100.000	Carlito_syrichta
ENSMOCG00000022038	Sf1	98	97.321	ENSCAPG00000010762	SF1	100	97.321	Cavia_aperea
ENSMOCG00000022038	Sf1	98	98.724	ENSCPOG00000012290	SF1	100	98.724	Cavia_porcellus
ENSMOCG00000022038	Sf1	100	99.216	ENSCCAG00000037881	SF1	100	99.216	Cebus_capucinus
ENSMOCG00000022038	Sf1	89	84.588	ENSCCAG00000023781	-	94	84.452	Cebus_capucinus
ENSMOCG00000022038	Sf1	100	99.216	ENSCATG00000011564	SF1	100	99.216	Cercocebus_atys
ENSMOCG00000022038	Sf1	83	98.866	ENSCSAG00000007258	SF1	97	98.866	Chlorocebus_sabaeus
ENSMOCG00000022038	Sf1	72	92.718	ENSCHOG00000006008	SF1	79	92.823	Choloepus_hoffmanni
ENSMOCG00000022038	Sf1	81	86.486	ENSCPBG00000023763	SF1	66	85.135	Chrysemys_picta_bellii
ENSMOCG00000022038	Sf1	54	67.093	ENSCING00000005564	-	72	61.667	Ciona_intestinalis
ENSMOCG00000022038	Sf1	90	47.245	ENSCSAVG00000009055	-	87	56.438	Ciona_savignyi
ENSMOCG00000022038	Sf1	100	99.216	ENSCANG00000042201	SF1	100	99.216	Colobus_angolensis_palliatus
ENSMOCG00000022038	Sf1	100	99.650	ENSCGRG00001003677	Sf1	100	99.650	Cricetulus_griseus_chok1gshd
ENSMOCG00000022038	Sf1	98	99.643	ENSCGRG00000001708	Sf1	100	99.643	Cricetulus_griseus_crigri
ENSMOCG00000022038	Sf1	69	78.818	ENSCSEG00000014375	sf1	57	76.755	Cynoglossus_semilaevis
ENSMOCG00000022038	Sf1	65	85.135	ENSCVAG00000001670	sf1	63	79.756	Cyprinodon_variegatus
ENSMOCG00000022038	Sf1	70	81.638	ENSDARG00000008188	sf1	72	80.000	Danio_rerio
ENSMOCG00000022038	Sf1	84	97.201	ENSDNOG00000001282	SF1	98	97.201	Dasypus_novemcinctus
ENSMOCG00000022038	Sf1	100	99.060	ENSDORG00000016334	Sf1	100	99.060	Dipodomys_ordii
ENSMOCG00000022038	Sf1	87	91.892	ENSETEG00000012830	SF1	82	91.282	Echinops_telfairi
ENSMOCG00000022038	Sf1	83	98.488	ENSEASG00005018272	SF1	97	98.488	Equus_asinus_asinus
ENSMOCG00000022038	Sf1	83	98.677	ENSECAG00000024544	SF1	97	98.677	Equus_caballus
ENSMOCG00000022038	Sf1	69	98.728	ENSEEUG00000001058	SF1	100	98.728	Erinaceus_europaeus
ENSMOCG00000022038	Sf1	65	82.228	ENSELUG00000013225	sf1	54	78.947	Esox_lucius
ENSMOCG00000022038	Sf1	100	99.216	ENSFCAG00000012231	SF1	100	99.216	Felis_catus
ENSMOCG00000022038	Sf1	98	97.500	ENSFDAG00000009833	SF1	100	97.500	Fukomys_damarensis
ENSMOCG00000022038	Sf1	66	80.928	ENSFHEG00000022656	sf1	61	76.761	Fundulus_heteroclitus
ENSMOCG00000022038	Sf1	66	84.156	ENSGAFG00000019284	sf1	78	80.714	Gambusia_affinis
ENSMOCG00000022038	Sf1	67	80.759	ENSGACG00000000826	sf1	68	77.014	Gasterosteus_aculeatus
ENSMOCG00000022038	Sf1	74	89.623	ENSGAGG00000021691	SF1	72	85.135	Gopherus_agassizii
ENSMOCG00000022038	Sf1	65	83.421	ENSHBUG00000011598	sf1	61	77.262	Haplochromis_burtoni
ENSMOCG00000022038	Sf1	100	99.060	ENSHGLG00000009541	SF1	100	99.060	Heterocephalus_glaber_female
ENSMOCG00000022038	Sf1	98	97.500	ENSHGLG00100013879	-	100	97.500	Heterocephalus_glaber_male
ENSMOCG00000022038	Sf1	76	86.000	ENSHGLG00100008255	-	94	85.504	Heterocephalus_glaber_male
ENSMOCG00000022038	Sf1	68	88.506	ENSHGLG00100008076	-	87	86.806	Heterocephalus_glaber_male
ENSMOCG00000022038	Sf1	66	81.606	ENSHCOG00000011388	sf1	58	74.941	Hippocampus_comes
ENSMOCG00000022038	Sf1	98	81.851	ENSSTOG00000024353	-	98	82.384	Ictidomys_tridecemlineatus
ENSMOCG00000022038	Sf1	98	99.203	ENSSTOG00000009790	-	100	99.203	Ictidomys_tridecemlineatus
ENSMOCG00000022038	Sf1	100	99.530	ENSJJAG00000011788	Sf1	100	99.530	Jaculus_jaculus
ENSMOCG00000022038	Sf1	67	82.653	ENSKMAG00000005854	sf1	63	77.518	Kryptolebias_marmoratus
ENSMOCG00000022038	Sf1	65	83.246	ENSLBEG00000019836	sf1	64	78.469	Labrus_bergylta
ENSMOCG00000022038	Sf1	73	78.333	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSMOCG00000022038	Sf1	65	85.146	ENSLOCG00000002130	sf1	59	80.049	Lepisosteus_oculatus
ENSMOCG00000022038	Sf1	99	94.884	ENSLAFG00000007201	SF1	100	94.884	Loxodonta_africana
ENSMOCG00000022038	Sf1	100	99.216	ENSMFAG00000033122	SF1	100	99.216	Macaca_fascicularis
ENSMOCG00000022038	Sf1	100	99.216	ENSMMUG00000022606	SF1	100	99.216	Macaca_mulatta
ENSMOCG00000022038	Sf1	100	95.137	ENSMNEG00000037901	SF1	100	95.137	Macaca_nemestrina
ENSMOCG00000022038	Sf1	98	99.204	ENSMLEG00000040706	SF1	95	99.204	Mandrillus_leucophaeus
ENSMOCG00000022038	Sf1	66	81.347	ENSMAMG00000001780	sf1	58	78.208	Mastacembelus_armatus
ENSMOCG00000022038	Sf1	65	83.158	ENSMZEG00005009196	sf1	61	77.030	Maylandia_zebra
ENSMOCG00000022038	Sf1	100	99.687	ENSMAUG00000014064	Sf1	100	99.687	Mesocricetus_auratus
ENSMOCG00000022038	Sf1	100	99.216	ENSMICG00000001202	SF1	100	99.216	Microcebus_murinus
ENSMOCG00000022038	Sf1	65	81.720	ENSMMOG00000020474	sf1	60	76.642	Mola_mola
ENSMOCG00000022038	Sf1	75	97.424	ENSMODG00000029407	SF1	97	93.960	Monodelphis_domestica
ENSMOCG00000022038	Sf1	65	83.422	ENSMALG00000020521	sf1	68	76.596	Monopterus_albus
ENSMOCG00000022038	Sf1	100	99.687	MGP_CAROLIEiJ_G0022607	Sf1	100	100.000	Mus_caroli
ENSMOCG00000022038	Sf1	100	99.687	ENSMUSG00000024949	Sf1	100	100.000	Mus_musculus
ENSMOCG00000022038	Sf1	100	99.373	MGP_PahariEiJ_G0014101	Sf1	100	100.000	Mus_pahari
ENSMOCG00000022038	Sf1	100	99.687	MGP_SPRETEiJ_G0023518	Sf1	100	100.000	Mus_spretus
ENSMOCG00000022038	Sf1	93	98.816	ENSMPUG00000012684	SF1	92	98.816	Mustela_putorius_furo
ENSMOCG00000022038	Sf1	79	93.126	ENSMLUG00000029800	-	78	94.053	Myotis_lucifugus
ENSMOCG00000022038	Sf1	93	98.646	ENSMLUG00000015217	-	92	98.646	Myotis_lucifugus
ENSMOCG00000022038	Sf1	100	99.216	ENSNGAG00000005550	Sf1	100	99.216	Nannospalax_galili
ENSMOCG00000022038	Sf1	65	84.225	ENSNBRG00000017606	sf1	60	79.902	Neolamprologus_brichardi
ENSMOCG00000022038	Sf1	100	99.060	ENSNLEG00000005236	-	100	99.060	Nomascus_leucogenys
ENSMOCG00000022038	Sf1	80	97.856	ENSMEUG00000013424	SF1	97	97.856	Notamacropus_eugenii
ENSMOCG00000022038	Sf1	74	98.316	ENSOPRG00000005008	SF1	96	98.316	Ochotona_princeps
ENSMOCG00000022038	Sf1	100	88.906	ENSODEG00000006102	-	100	87.057	Octodon_degus
ENSMOCG00000022038	Sf1	65	82.895	ENSONIG00000015728	sf1	61	76.798	Oreochromis_niloticus
ENSMOCG00000022038	Sf1	62	87.151	ENSOANG00000002909	SF1	96	87.212	Ornithorhynchus_anatinus
ENSMOCG00000022038	Sf1	99	99.048	ENSOCUG00000026486	SF1	100	99.048	Oryctolagus_cuniculus
ENSMOCG00000022038	Sf1	67	81.074	ENSORLG00000011853	sf1	58	76.978	Oryzias_latipes
ENSMOCG00000022038	Sf1	68	79.750	ENSORLG00020011834	sf1	60	75.822	Oryzias_latipes_hni
ENSMOCG00000022038	Sf1	65	80.890	ENSORLG00015012855	sf1	59	76.739	Oryzias_latipes_hsok
ENSMOCG00000022038	Sf1	67	80.307	ENSOMEG00000005210	sf1	61	76.056	Oryzias_melastigma
ENSMOCG00000022038	Sf1	100	99.060	ENSOGAG00000016196	SF1	100	99.060	Otolemur_garnettii
ENSMOCG00000022038	Sf1	83	94.404	ENSOARG00000009166	SF1	82	99.143	Ovis_aries
ENSMOCG00000022038	Sf1	99	94.462	ENSPPAG00000002799	-	96	98.504	Pan_paniscus
ENSMOCG00000022038	Sf1	98	99.203	ENSPPRG00000013566	SF1	98	99.203	Panthera_pardus
ENSMOCG00000022038	Sf1	99	89.735	ENSPTIG00000016141	SF1	99	88.482	Panthera_tigris_altaica
ENSMOCG00000022038	Sf1	100	99.216	ENSPTRG00000003846	SF1	100	99.216	Pan_troglodytes
ENSMOCG00000022038	Sf1	100	95.137	ENSPANG00000020754	SF1	97	98.866	Papio_anubis
ENSMOCG00000022038	Sf1	58	78.529	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSMOCG00000022038	Sf1	56	88.125	ENSPSIG00000003610	SF1	84	82.944	Pelodiscus_sinensis
ENSMOCG00000022038	Sf1	100	99.843	ENSPEMG00000010463	Sf1	100	99.843	Peromyscus_maniculatus_bairdii
ENSMOCG00000022038	Sf1	100	97.806	ENSPCIG00000018173	SF1	100	97.806	Phascolarctos_cinereus
ENSMOCG00000022038	Sf1	66	86.016	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSMOCG00000022038	Sf1	65	84.127	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSMOCG00000022038	Sf1	65	84.127	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSMOCG00000022038	Sf1	65	83.202	ENSPREG00000004155	sf1	59	78.947	Poecilia_reticulata
ENSMOCG00000022038	Sf1	100	99.060	ENSPPYG00000003098	-	100	99.060	Pongo_abelii
ENSMOCG00000022038	Sf1	82	97.148	ENSPCAG00000013631	SF1	78	97.148	Procavia_capensis
ENSMOCG00000022038	Sf1	100	99.060	ENSPCOG00000027546	SF1	100	99.060	Propithecus_coquereli
ENSMOCG00000022038	Sf1	82	97.148	ENSPVAG00000016938	SF1	79	97.148	Pteropus_vampyrus
ENSMOCG00000022038	Sf1	65	83.158	ENSPNYG00000004673	sf1	59	78.199	Pundamilia_nyererei
ENSMOCG00000022038	Sf1	65	85.450	ENSPNAG00000013072	sf1	59	80.049	Pygocentrus_nattereri
ENSMOCG00000022038	Sf1	94	99.332	ENSRNOG00000021085	Sf1	94	99.332	Rattus_norvegicus
ENSMOCG00000022038	Sf1	100	95.141	ENSRBIG00000042818	SF1	100	95.141	Rhinopithecus_bieti
ENSMOCG00000022038	Sf1	100	95.797	ENSRROG00000045655	SF1	100	95.797	Rhinopithecus_roxellana
ENSMOCG00000022038	Sf1	51	43.421	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSMOCG00000022038	Sf1	93	78.571	ENSSBOG00000022267	-	99	80.769	Saimiri_boliviensis_boliviensis
ENSMOCG00000022038	Sf1	71	91.463	ENSSHAG00000006841	SF1	75	92.683	Sarcophilus_harrisii
ENSMOCG00000022038	Sf1	69	80.549	ENSSFOG00015021978	sf1	55	76.812	Scleropages_formosus
ENSMOCG00000022038	Sf1	72	76.347	ENSSMAG00000007549	sf1	63	76.526	Scophthalmus_maximus
ENSMOCG00000022038	Sf1	66	80.720	ENSSDUG00000003903	sf1	63	76.636	Seriola_dumerili
ENSMOCG00000022038	Sf1	66	80.720	ENSSLDG00000013075	sf1	61	76.636	Seriola_lalandi_dorsalis
ENSMOCG00000022038	Sf1	81	94.971	ENSSARG00000008180	SF1	100	94.971	Sorex_araneus
ENSMOCG00000022038	Sf1	79	82.567	ENSSPUG00000012907	SF1	76	84.816	Sphenodon_punctatus
ENSMOCG00000022038	Sf1	66	80.412	ENSSPAG00000019060	sf1	61	74.828	Stegastes_partitus
ENSMOCG00000022038	Sf1	100	98.903	ENSSSCG00000013021	SF1	100	98.903	Sus_scrofa
ENSMOCG00000022038	Sf1	84	63.168	ENSTNIG00000004820	sf1	80	70.070	Tetraodon_nigroviridis
ENSMOCG00000022038	Sf1	72	92.140	ENSTBEG00000013133	SF1	66	92.105	Tupaia_belangeri
ENSMOCG00000022038	Sf1	81	94.981	ENSTTRG00000008857	SF1	96	95.349	Tursiops_truncatus
ENSMOCG00000022038	Sf1	75	96.466	ENSUAMG00000011977	SF1	95	93.964	Ursus_americanus
ENSMOCG00000022038	Sf1	99	88.246	ENSUMAG00000007268	SF1	90	97.955	Ursus_maritimus
ENSMOCG00000022038	Sf1	60	99.598	ENSVPAG00000011912	SF1	66	99.598	Vicugna_pacos
ENSMOCG00000022038	Sf1	83	98.866	ENSVVUG00000028585	SF1	97	98.866	Vulpes_vulpes
ENSMOCG00000022038	Sf1	93	68.689	ENSXETG00000008434	sf1	68	81.311	Xenopus_tropicalis
ENSMOCG00000022038	Sf1	64	85.753	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSMOCG00000022038	Sf1	65	83.905	ENSXMAG00000007822	sf1	61	79.426	Xiphophorus_maculatus