EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000022166 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 497 bases
Position: chr6:27122723-27123219
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000026311	LSM	PF01423.22	8.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000030187	-	273	-	ENSMOCP00000026311	90 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000022166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000022166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000022166	-	74	77.612	ENSMOCG00000020220	-	87	77.612
ENSMOCG00000022166	-	82	85.333	ENSMOCG00000020437	Snrpf	87	85.333
ENSMOCG00000022166	-	72	46.970	ENSMOCG00000020049	Lsm6	83	46.970

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000022166	-	82	85.333	ENSG00000139343	SNRPF	87	85.333	Homo_sapiens
ENSMOCG00000022166	-	81	83.784	ENSAPOG00000003377	snrpf	58	83.784	Acanthochromis_polyacanthus
ENSMOCG00000022166	-	83	73.684	ENSAMEG00000018718	-	87	74.667	Ailuropoda_melanoleuca
ENSMOCG00000022166	-	81	85.135	ENSAMEG00000002166	-	87	85.135	Ailuropoda_melanoleuca
ENSMOCG00000022166	-	80	84.932	ENSACIG00000013216	snrpf	86	84.932	Amphilophus_citrinellus
ENSMOCG00000022166	-	80	84.932	ENSAOCG00000015108	snrpf	86	84.932	Amphiprion_ocellaris
ENSMOCG00000022166	-	80	84.932	ENSAPEG00000022022	snrpf	86	84.932	Amphiprion_percula
ENSMOCG00000022166	-	81	83.784	ENSATEG00000022625	snrpf	80	83.784	Anabas_testudineus
ENSMOCG00000022166	-	81	83.784	ENSACAG00000014073	SNRPF	85	83.784	Anolis_carolinensis
ENSMOCG00000022166	-	82	85.333	ENSANAG00000032845	SNRPF	87	85.333	Aotus_nancymaae
ENSMOCG00000022166	-	78	81.690	ENSANAG00000020297	-	65	81.690	Aotus_nancymaae
ENSMOCG00000022166	-	82	62.162	ENSANAG00000025860	-	85	62.162	Aotus_nancymaae
ENSMOCG00000022166	-	80	84.932	ENSACLG00000016066	snrpf	86	84.932	Astatotilapia_calliptera
ENSMOCG00000022166	-	82	81.333	ENSAMXG00000007421	snrpf	87	81.333	Astyanax_mexicanus
ENSMOCG00000022166	-	82	85.333	ENSBTAG00000016271	SNRPF	87	85.333	Bos_taurus
ENSMOCG00000022166	-	86	79.487	ENSBTAG00000050012	-	93	78.667	Bos_taurus
ENSMOCG00000022166	-	91	65.060	WBGene00004918	snr-5	85	68.056	Caenorhabditis_elegans
ENSMOCG00000022166	-	82	85.333	ENSCJAG00000002705	-	87	85.333	Callithrix_jacchus
ENSMOCG00000022166	-	82	85.333	ENSCAFG00000006395	-	68	85.333	Canis_familiaris
ENSMOCG00000022166	-	78	81.690	ENSCAFG00000031151	-	85	82.192	Canis_familiaris
ENSMOCG00000022166	-	78	81.690	ENSCAFG00020010823	-	85	82.192	Canis_lupus_dingo
ENSMOCG00000022166	-	81	81.081	ENSCAFG00020013161	-	74	85.714	Canis_lupus_dingo
ENSMOCG00000022166	-	82	80.000	ENSTSYG00000036502	-	87	80.000	Carlito_syrichta
ENSMOCG00000022166	-	82	77.333	ENSTSYG00000030635	-	87	77.333	Carlito_syrichta
ENSMOCG00000022166	-	93	77.907	ENSTSYG00000031636	-	61	82.192	Carlito_syrichta
ENSMOCG00000022166	-	81	85.135	ENSCAPG00000007242	SNRPF	87	85.135	Cavia_aperea
ENSMOCG00000022166	-	82	85.333	ENSCPOG00000013898	SNRPF	87	85.333	Cavia_porcellus
ENSMOCG00000022166	-	98	73.626	ENSCCAG00000033627	-	59	77.333	Cebus_capucinus
ENSMOCG00000022166	-	82	85.333	ENSCCAG00000037378	-	87	85.333	Cebus_capucinus
ENSMOCG00000022166	-	80	84.932	ENSCCAG00000017356	-	87	85.333	Cebus_capucinus
ENSMOCG00000022166	-	82	85.333	ENSCLAG00000007200	SNRPF	87	85.333	Chinchilla_lanigera
ENSMOCG00000022166	-	82	85.333	ENSCSAG00000003602	-	61	85.333	Chlorocebus_sabaeus
ENSMOCG00000022166	-	70	84.375	ENSCHOG00000009392	SNRPF	100	84.375	Choloepus_hoffmanni
ENSMOCG00000022166	-	82	77.333	ENSCPBG00000006227	-	87	77.333	Chrysemys_picta_bellii
ENSMOCG00000022166	-	89	81.481	ENSCPBG00000024287	-	60	81.081	Chrysemys_picta_bellii
ENSMOCG00000022166	-	90	75.904	ENSCPBG00000026463	-	87	76.000	Chrysemys_picta_bellii
ENSMOCG00000022166	-	90	78.049	ENSCPBG00000001985	-	89	77.333	Chrysemys_picta_bellii
ENSMOCG00000022166	-	89	76.829	ENSCSAVG00000007498	-	83	78.082	Ciona_savignyi
ENSMOCG00000022166	-	98	76.667	ENSCGRG00001008965	-	71	77.778	Cricetulus_griseus_chok1gshd
ENSMOCG00000022166	-	82	85.333	ENSCGRG00001017100	-	87	85.333	Cricetulus_griseus_chok1gshd
ENSMOCG00000022166	-	88	81.013	ENSCGRG00000018878	-	94	81.081	Cricetulus_griseus_crigri
ENSMOCG00000022166	-	82	85.333	ENSCGRG00000000336	-	87	85.333	Cricetulus_griseus_crigri
ENSMOCG00000022166	-	82	82.667	ENSCSEG00000004748	snrpf	87	82.667	Cynoglossus_semilaevis
ENSMOCG00000022166	-	81	83.784	ENSCVAG00000000397	snrpf	59	83.784	Cyprinodon_variegatus
ENSMOCG00000022166	-	82	81.818	ENSDARG00000105037	snrpf	88	81.818	Danio_rerio
ENSMOCG00000022166	-	82	85.333	ENSDNOG00000048989	-	67	85.333	Dasypus_novemcinctus
ENSMOCG00000022166	-	82	72.000	ENSDNOG00000049373	-	65	72.000	Dasypus_novemcinctus
ENSMOCG00000022166	-	64	81.356	ENSDORG00000029740	-	72	81.356	Dipodomys_ordii
ENSMOCG00000022166	-	79	75.000	ENSDORG00000025351	-	100	75.000	Dipodomys_ordii
ENSMOCG00000022166	-	88	69.136	FBgn0000426	SmF	83	71.233	Drosophila_melanogaster
ENSMOCG00000022166	-	82	85.333	ENSETEG00000001558	-	87	85.333	Echinops_telfairi
ENSMOCG00000022166	-	73	74.627	ENSEBUG00000001793	-	72	74.627	Eptatretus_burgeri
ENSMOCG00000022166	-	82	85.333	ENSECAG00000019817	SNRPF	61	85.333	Equus_caballus
ENSMOCG00000022166	-	81	85.135	ENSEEUG00000013509	SNRPF	87	85.135	Erinaceus_europaeus
ENSMOCG00000022166	-	94	77.011	ENSELUG00000007737	RUXF	86	80.000	Esox_lucius
ENSMOCG00000022166	-	82	81.333	ENSELUG00000003121	RUXF	87	81.333	Esox_lucius
ENSMOCG00000022166	-	82	85.333	ENSFCAG00000029966	-	87	85.333	Felis_catus
ENSMOCG00000022166	-	90	66.265	ENSFCAG00000031148	-	69	64.000	Felis_catus
ENSMOCG00000022166	-	82	66.667	ENSFCAG00000021942	-	87	66.667	Felis_catus
ENSMOCG00000022166	-	81	85.135	ENSFALG00000010799	SNRPF	86	85.135	Ficedula_albicollis
ENSMOCG00000022166	-	82	85.333	ENSFDAG00000002831	-	87	85.333	Fukomys_damarensis
ENSMOCG00000022166	-	81	83.784	ENSFHEG00000003240	snrpf	65	83.784	Fundulus_heteroclitus
ENSMOCG00000022166	-	81	83.784	ENSGMOG00000007741	snrpf	87	83.784	Gadus_morhua
ENSMOCG00000022166	-	82	85.333	ENSGALG00000011409	SNRPF	87	85.333	Gallus_gallus
ENSMOCG00000022166	-	80	84.932	ENSGAFG00000016187	snrpf	84	84.932	Gambusia_affinis
ENSMOCG00000022166	-	81	82.432	ENSGACG00000020055	snrpf	87	82.432	Gasterosteus_aculeatus
ENSMOCG00000022166	-	61	80.357	ENSGAGG00000011163	-	86	81.633	Gopherus_agassizii
ENSMOCG00000022166	-	76	72.464	ENSGAGG00000014132	-	83	72.464	Gopherus_agassizii
ENSMOCG00000022166	-	68	82.258	ENSGAGG00000020974	-	54	79.688	Gopherus_agassizii
ENSMOCG00000022166	-	77	81.429	ENSGAGG00000012945	-	69	80.000	Gopherus_agassizii
ENSMOCG00000022166	-	82	81.333	ENSGAGG00000022991	-	80	82.353	Gopherus_agassizii
ENSMOCG00000022166	-	90	66.667	ENSGGOG00000039564	-	90	66.216	Gorilla_gorilla
ENSMOCG00000022166	-	90	67.470	ENSGGOG00000039936	-	83	65.333	Gorilla_gorilla
ENSMOCG00000022166	-	82	85.333	ENSGGOG00000001127	-	87	85.333	Gorilla_gorilla
ENSMOCG00000022166	-	82	85.333	ENSHGLG00000009108	SNRPF	87	85.333	Heterocephalus_glaber_female
ENSMOCG00000022166	-	82	84.000	ENSHGLG00000021172	-	87	84.000	Heterocephalus_glaber_female
ENSMOCG00000022166	-	81	85.135	ENSHGLG00100008103	-	87	85.135	Heterocephalus_glaber_male
ENSMOCG00000022166	-	82	84.000	ENSHGLG00100019596	-	87	84.000	Heterocephalus_glaber_male
ENSMOCG00000022166	-	69	75.714	ENSHCOG00000018663	snrpf	55	75.714	Hippocampus_comes
ENSMOCG00000022166	-	82	84.000	ENSIPUG00000018994	snrpf	87	84.000	Ictalurus_punctatus
ENSMOCG00000022166	-	82	85.333	ENSSTOG00000010434	-	87	85.333	Ictidomys_tridecemlineatus
ENSMOCG00000022166	-	90	73.171	ENSJJAG00000010502	-	89	73.333	Jaculus_jaculus
ENSMOCG00000022166	-	90	71.951	ENSJJAG00000004558	-	89	70.667	Jaculus_jaculus
ENSMOCG00000022166	-	69	82.540	ENSJJAG00000004828	-	86	82.143	Jaculus_jaculus
ENSMOCG00000022166	-	82	85.333	ENSJJAG00000011272	-	87	85.333	Jaculus_jaculus
ENSMOCG00000022166	-	82	84.000	ENSKMAG00000013566	snrpf	87	84.000	Kryptolebias_marmoratus
ENSMOCG00000022166	-	82	82.667	ENSLBEG00000008800	snrpf	87	82.667	Labrus_bergylta
ENSMOCG00000022166	-	82	84.000	ENSLACG00000002456	-	64	84.000	Latimeria_chalumnae
ENSMOCG00000022166	-	82	81.333	ENSLOCG00000015744	snrpf	87	81.333	Lepisosteus_oculatus
ENSMOCG00000022166	-	81	85.135	ENSLAFG00000017426	SNRPF	86	85.135	Loxodonta_africana
ENSMOCG00000022166	-	80	83.562	ENSMAMG00000016593	snrpf	86	83.562	Mastacembelus_armatus
ENSMOCG00000022166	-	80	84.932	ENSMZEG00005014701	snrpf	86	84.932	Maylandia_zebra
ENSMOCG00000022166	-	80	86.301	ENSMGAG00000011453	-	66	86.301	Meleagris_gallopavo
ENSMOCG00000022166	-	69	84.127	ENSMAUG00000016909	-	85	84.127	Mesocricetus_auratus
ENSMOCG00000022166	-	69	84.127	ENSMAUG00000019737	-	85	84.127	Mesocricetus_auratus
ENSMOCG00000022166	-	62	82.456	ENSMAUG00000010289	-	66	84.000	Mesocricetus_auratus
ENSMOCG00000022166	-	82	80.000	ENSMAUG00000008799	-	87	80.000	Mesocricetus_auratus
ENSMOCG00000022166	-	82	85.333	ENSMICG00000012153	-	87	85.333	Microcebus_murinus
ENSMOCG00000022166	-	82	78.667	ENSMICG00000030494	-	60	78.667	Microcebus_murinus
ENSMOCG00000022166	-	81	82.432	ENSMMOG00000007127	snrpf	87	82.432	Mola_mola
ENSMOCG00000022166	-	82	85.333	ENSMODG00000008091	SNRPF	66	85.333	Monodelphis_domestica
ENSMOCG00000022166	-	80	84.932	ENSMALG00000012328	snrpf	86	84.932	Monopterus_albus
ENSMOCG00000022166	-	82	85.333	MGP_CAROLIEiJ_G0015735	-	87	85.333	Mus_caroli
ENSMOCG00000022166	-	82	85.333	ENSMUSG00000020018	Snrpf	87	85.333	Mus_musculus
ENSMOCG00000022166	-	82	85.333	MGP_PahariEiJ_G0031350	Snrpf	87	85.333	Mus_pahari
ENSMOCG00000022166	-	82	85.333	MGP_SPRETEiJ_G0016553	Snrpf	87	85.333	Mus_spretus
ENSMOCG00000022166	-	82	85.333	ENSMPUG00000007176	-	67	85.333	Mustela_putorius_furo
ENSMOCG00000022166	-	82	85.333	ENSMLUG00000029201	-	71	85.333	Myotis_lucifugus
ENSMOCG00000022166	-	81	85.135	ENSMLUG00000013577	-	87	85.135	Myotis_lucifugus
ENSMOCG00000022166	-	82	85.333	ENSMLUG00000026149	-	71	85.333	Myotis_lucifugus
ENSMOCG00000022166	-	90	69.880	ENSMLUG00000026269	-	71	68.000	Myotis_lucifugus
ENSMOCG00000022166	-	82	85.333	ENSMLUG00000027932	-	71	85.333	Myotis_lucifugus
ENSMOCG00000022166	-	82	85.333	ENSNGAG00000024292	-	87	85.333	Nannospalax_galili
ENSMOCG00000022166	-	69	80.952	ENSNGAG00000005851	-	71	80.000	Nannospalax_galili
ENSMOCG00000022166	-	81	83.784	ENSNBRG00000011682	snrpf	76	83.784	Neolamprologus_brichardi
ENSMOCG00000022166	-	81	59.459	ENSMEUG00000000671	SNRPF	87	59.459	Notamacropus_eugenii
ENSMOCG00000022166	-	82	85.333	ENSODEG00000010328	-	87	85.333	Octodon_degus
ENSMOCG00000022166	-	82	84.000	ENSOCUG00000010925	SNRPF	66	84.000	Oryctolagus_cuniculus
ENSMOCG00000022166	-	81	81.081	ENSORLG00020008216	snrpf	87	81.081	Oryzias_latipes_hni
ENSMOCG00000022166	-	81	81.081	ENSORLG00015007418	snrpf	87	81.081	Oryzias_latipes_hsok
ENSMOCG00000022166	-	80	83.562	ENSOMEG00000003018	snrpf	86	83.562	Oryzias_melastigma
ENSMOCG00000022166	-	82	84.000	ENSOGAG00000030323	-	87	84.000	Otolemur_garnettii
ENSMOCG00000022166	-	82	85.333	ENSOARG00000011853	-	65	85.333	Ovis_aries
ENSMOCG00000022166	-	90	67.901	ENSPPAG00000037479	-	91	67.568	Pan_paniscus
ENSMOCG00000022166	-	90	67.470	ENSPPAG00000037544	-	83	65.333	Pan_paniscus
ENSMOCG00000022166	-	82	85.333	ENSPPRG00000005875	-	87	85.333	Panthera_pardus
ENSMOCG00000022166	-	90	67.470	ENSPPRG00000007449	-	77	65.333	Panthera_pardus
ENSMOCG00000022166	-	82	85.333	ENSPTIG00000007520	SNRPF	87	85.333	Panthera_tigris_altaica
ENSMOCG00000022166	-	90	67.470	ENSPTIG00000005117	-	89	65.333	Panthera_tigris_altaica
ENSMOCG00000022166	-	90	67.901	ENSPTRG00000047717	-	91	67.568	Pan_troglodytes
ENSMOCG00000022166	-	90	67.470	ENSPTRG00000043814	-	83	65.333	Pan_troglodytes
ENSMOCG00000022166	-	81	83.784	ENSPKIG00000014784	snrpf	81	83.784	Paramormyrops_kingsleyae
ENSMOCG00000022166	-	81	85.135	ENSPSIG00000016462	SNRPF	86	85.135	Pelodiscus_sinensis
ENSMOCG00000022166	-	81	82.432	ENSPMGG00000023548	snrpf	87	82.432	Periophthalmus_magnuspinnatus
ENSMOCG00000022166	-	82	85.333	ENSPEMG00000023326	Snrpf	87	85.333	Peromyscus_maniculatus_bairdii
ENSMOCG00000022166	-	80	84.932	ENSPLAG00000023932	snrpf	86	84.932	Poecilia_latipinna
ENSMOCG00000022166	-	80	84.932	ENSPMEG00000003377	snrpf	86	84.932	Poecilia_mexicana
ENSMOCG00000022166	-	80	84.932	ENSPREG00000022635	snrpf	84	84.932	Poecilia_reticulata
ENSMOCG00000022166	-	82	85.333	ENSPPYG00000004847	-	87	85.333	Pongo_abelii
ENSMOCG00000022166	-	82	85.333	ENSPCOG00000023833	-	87	85.333	Propithecus_coquereli
ENSMOCG00000022166	-	82	85.333	ENSPVAG00000009036	SNRPF	87	85.333	Pteropus_vampyrus
ENSMOCG00000022166	-	80	84.932	ENSPNYG00000021712	snrpf	86	84.932	Pundamilia_nyererei
ENSMOCG00000022166	-	80	83.562	ENSPNAG00000019117	snrpf	86	83.562	Pygocentrus_nattereri
ENSMOCG00000022166	-	82	85.333	ENSRNOG00000005556	Snrpf	87	85.333	Rattus_norvegicus
ENSMOCG00000022166	-	82	84.000	ENSRBIG00000030414	-	87	84.000	Rhinopithecus_bieti
ENSMOCG00000022166	-	82	84.000	ENSRROG00000021975	-	87	84.000	Rhinopithecus_roxellana
ENSMOCG00000022166	-	77	52.113	YPR182W	SMX3	83	52.113	Saccharomyces_cerevisiae
ENSMOCG00000022166	-	82	70.513	ENSSBOG00000027638	-	88	70.513	Saimiri_boliviensis_boliviensis
ENSMOCG00000022166	-	82	85.333	ENSSBOG00000012868	-	87	85.333	Saimiri_boliviensis_boliviensis
ENSMOCG00000022166	-	82	85.333	ENSSBOG00000036179	-	87	85.333	Saimiri_boliviensis_boliviensis
ENSMOCG00000022166	-	82	73.333	ENSSBOG00000032297	-	86	73.333	Saimiri_boliviensis_boliviensis
ENSMOCG00000022166	-	81	85.135	ENSSHAG00000012294	SNRPF	67	85.135	Sarcophilus_harrisii
ENSMOCG00000022166	-	70	82.812	ENSSFOG00015021523	snrpf	96	82.812	Scleropages_formosus
ENSMOCG00000022166	-	82	81.333	ENSSMAG00000005533	snrpf	86	81.333	Scophthalmus_maximus
ENSMOCG00000022166	-	71	83.077	ENSSDUG00000016283	snrpf	77	83.077	Seriola_dumerili
ENSMOCG00000022166	-	82	84.000	ENSSLDG00000005119	snrpf	87	84.000	Seriola_lalandi_dorsalis
ENSMOCG00000022166	-	86	66.667	ENSSLDG00000003885	-	89	67.123	Seriola_lalandi_dorsalis
ENSMOCG00000022166	-	80	86.301	ENSSPUG00000014590	-	86	86.301	Sphenodon_punctatus
ENSMOCG00000022166	-	81	83.784	ENSSPAG00000003283	snrpf	84	83.784	Stegastes_partitus
ENSMOCG00000022166	-	82	85.333	ENSSSCG00000000895	SNRPF	87	85.333	Sus_scrofa
ENSMOCG00000022166	-	62	82.456	ENSTRUG00000014956	snrpf	83	82.456	Takifugu_rubripes
ENSMOCG00000022166	-	82	82.667	ENSTNIG00000012672	snrpf	87	82.667	Tetraodon_nigroviridis
ENSMOCG00000022166	-	82	60.000	ENSTTRG00000006070	SNRPF	87	60.000	Tursiops_truncatus
ENSMOCG00000022166	-	90	74.390	ENSUAMG00000001101	-	88	74.667	Ursus_americanus
ENSMOCG00000022166	-	82	85.333	ENSUAMG00000008176	-	87	85.333	Ursus_americanus
ENSMOCG00000022166	-	82	74.667	ENSUMAG00000006177	-	88	74.667	Ursus_maritimus
ENSMOCG00000022166	-	82	85.333	ENSUMAG00000003528	-	87	85.333	Ursus_maritimus
ENSMOCG00000022166	-	82	85.333	ENSVPAG00000008712	-	87	85.333	Vicugna_pacos
ENSMOCG00000022166	-	86	82.051	ENSVVUG00000023821	-	96	81.333	Vulpes_vulpes
ENSMOCG00000022166	-	81	61.842	ENSXETG00000021630	snrpf	87	61.842	Xenopus_tropicalis
ENSMOCG00000022166	-	80	84.932	ENSXCOG00000013860	snrpf	84	84.932	Xiphophorus_couchianus
ENSMOCG00000022166	-	80	84.932	ENSXMAG00000015448	snrpf	86	84.932	Xiphophorus_maculatus