EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMOCG00000022209 (Gene tree)
Gene ID
101980203
Gene Symbol
Smarca4
Alias
Brg1|SNF2beta|SW1/SNF|b2b508.1Clo|b2b692Clo
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Microtus_ochrogaster
Status
putative
Strand
Plus strand
Length
103611 bases
Position
chr5:15768113-15871723
Accession
101980203
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMOCP00000026400ResIIIPF04851.151.5e-0911
ENSMOCP00000026402ResIIIPF04851.151.6e-0911
ENSMOCP00000026400BRKPF07533.161.3e-1711
ENSMOCP00000026402BRKPF07533.161.3e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMOCT00000030276-5323XM_005346911ENSMOCP000000264001617 (aa)XP_005346968UPI00067C54C5
ENSMOCT00000030278-4983-ENSMOCP000000264021660 (aa)--
Gene Model
Click here to download ENSMOCG00000022209's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000022209's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMOCG00000022209Smarca49873.572ENSMOCG00000001611Smarca29379.895
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMOCG00000022209Smarca410099.134ENSG00000127616SMARCA410099.158Homo_sapiens
ENSMOCG00000022209Smarca47885.128ENSAPOG00000003509smarca4a9984.973Acanthochromis_polyacanthus
ENSMOCG00000022209Smarca49583.634ENSAPOG00000004542SMARCA49883.127Acanthochromis_polyacanthus
ENSMOCG00000022209Smarca410094.756ENSAMEG00000010868SMARCA410094.756Ailuropoda_melanoleuca
ENSMOCG00000022209Smarca49787.328ENSACIG00000021550smarca4a9886.823Amphilophus_citrinellus
ENSMOCG00000022209Smarca49486.465ENSAOCG00000009450-9786.894Amphiprion_ocellaris
ENSMOCG00000022209Smarca48985.576ENSAOCG00000019167smarca4a10085.872Amphiprion_ocellaris
ENSMOCG00000022209Smarca410082.801ENSAPEG00000023108-9982.850Amphiprion_percula
ENSMOCG00000022209Smarca48985.645ENSAPEG00000015559smarca4a10085.941Amphiprion_percula
ENSMOCG00000022209Smarca410086.983ENSATEG00000011524smarca4a10087.112Anabas_testudineus
ENSMOCG00000022209Smarca49983.232ENSATEG00000001094-9589.474Anabas_testudineus
ENSMOCG00000022209Smarca49998.696ENSANAG00000036991SMARCA49997.010Aotus_nancymaae
ENSMOCG00000022209Smarca49788.291ENSACLG00000000163smarca4a9887.453Astatotilapia_calliptera
ENSMOCG00000022209Smarca49583.698ENSACLG00000008638-9882.814Astatotilapia_calliptera
ENSMOCG00000022209Smarca49486.883ENSAMXG00000011238-9886.485Astyanax_mexicanus
ENSMOCG00000022209Smarca49782.859ENSAMXG00000021023smarca4a8388.940Astyanax_mexicanus
ENSMOCG00000022209Smarca410098.145ENSBTAG00000019220SMARCA410098.145Bos_taurus
ENSMOCG00000022209Smarca49997.010ENSCJAG00000005936SMARCA49997.010Callithrix_jacchus
ENSMOCG00000022209Smarca410098.949ENSCAFG00000017584SMARCA410098.949Canis_familiaris
ENSMOCG00000022209Smarca410098.949ENSCAFG00020024620SMARCA49998.949Canis_lupus_dingo
ENSMOCG00000022209Smarca410093.704ENSCHIG00000015318SMARCA410093.704Capra_hircus
ENSMOCG00000022209Smarca410098.641ENSTSYG00000012966SMARCA410098.641Carlito_syrichta
ENSMOCG00000022209Smarca49488.259ENSCAPG00000015932SMARCA49694.562Cavia_aperea
ENSMOCG00000022209Smarca410098.330ENSCPOG00000015549SMARCA410098.330Cavia_porcellus
ENSMOCG00000022209Smarca410095.018ENSCCAG00000031660SMARCA49995.018Cebus_capucinus
ENSMOCG00000022209Smarca410098.949ENSCATG00000029530SMARCA410098.949Cercocebus_atys
ENSMOCG00000022209Smarca410097.959ENSCLAG00000011946SMARCA410097.959Chinchilla_lanigera
ENSMOCG00000022209Smarca410096.660ENSCPBG00000009994SMARCA410096.660Chrysemys_picta_bellii
ENSMOCG00000022209Smarca410098.949ENSCANG00000036013SMARCA410098.949Colobus_angolensis_palliatus
ENSMOCG00000022209Smarca410099.505ENSCGRG00001016732Smarca410099.505Cricetulus_griseus_chok1gshd
ENSMOCG00000022209Smarca410099.505ENSCGRG00000017242Smarca410099.505Cricetulus_griseus_crigri
ENSMOCG00000022209Smarca49686.507ENSCSEG00000014771smarca4a10086.557Cynoglossus_semilaevis
ENSMOCG00000022209Smarca49786.475ENSCVAG00000006979smarca4a9986.305Cyprinodon_variegatus
ENSMOCG00000022209Smarca49983.875ENSCVAG00000003018-9884.188Cyprinodon_variegatus
ENSMOCG00000022209Smarca410086.703ENSDARG00000077226smarca4a10086.946Danio_rerio
ENSMOCG00000022209Smarca49283.775ENSDARG00000104339SMARCA49584.166Danio_rerio
ENSMOCG00000022209Smarca410089.535ENSDNOG00000048847SMARCA49398.419Dasypus_novemcinctus
ENSMOCG00000022209Smarca48492.342ENSDORG00000002544Smarca49192.342Dipodomys_ordii
ENSMOCG00000022209Smarca49388.680ENSETEG00000013361SMARCA49488.680Echinops_telfairi
ENSMOCG00000022209Smarca410098.516ENSEASG00005006167SMARCA410096.545Equus_asinus_asinus
ENSMOCG00000022209Smarca410098.578ENSECAG00000008334SMARCA410098.578Equus_caballus
ENSMOCG00000022209Smarca410086.301ENSELUG00000010247smarca4a10084.369Esox_lucius
ENSMOCG00000022209Smarca49978.236ENSELUG00000023232-9385.561Esox_lucius
ENSMOCG00000022209Smarca410099.134ENSFCAG00000004894SMARCA410099.134Felis_catus
ENSMOCG00000022209Smarca47497.320ENSFALG00000004208SMARCA49391.600Ficedula_albicollis
ENSMOCG00000022209Smarca49298.379ENSFDAG00000012237SMARCA49798.379Fukomys_damarensis
ENSMOCG00000022209Smarca410083.779ENSFHEG00000007902-9884.289Fundulus_heteroclitus
ENSMOCG00000022209Smarca49686.010ENSFHEG00000010182smarca4a10086.303Fundulus_heteroclitus
ENSMOCG00000022209Smarca49280.582ENSGMOG00000005756-8580.392Gadus_morhua
ENSMOCG00000022209Smarca49380.000ENSGMOG00000002649smarca4a8781.904Gadus_morhua
ENSMOCG00000022209Smarca47396.531ENSGALG00000047145SMARCA410096.531Gallus_gallus
ENSMOCG00000022209Smarca49088.308ENSGAFG00000014900smarca4a9987.940Gambusia_affinis
ENSMOCG00000022209Smarca49981.398ENSGAFG00000008827-9881.688Gambusia_affinis
ENSMOCG00000022209Smarca49885.572ENSGACG00000006691smarca4a10085.124Gasterosteus_aculeatus
ENSMOCG00000022209Smarca49980.410ENSGACG00000016033-9979.114Gasterosteus_aculeatus
ENSMOCG00000022209Smarca410096.599ENSGAGG00000016757SMARCA410096.599Gopherus_agassizii
ENSMOCG00000022209Smarca410098.949ENSGGOG00000009882SMARCA410098.949Gorilla_gorilla
ENSMOCG00000022209Smarca410087.226ENSHBUG00000021172smarca4a10086.983Haplochromis_burtoni
ENSMOCG00000022209Smarca410083.622ENSHBUG00000005447-9982.876Haplochromis_burtoni
ENSMOCG00000022209Smarca410098.396ENSHGLG00000010519SMARCA410098.396Heterocephalus_glaber_female
ENSMOCG00000022209Smarca410097.221ENSHGLG00100013774SMARCA410097.221Heterocephalus_glaber_male
ENSMOCG00000022209Smarca49585.988ENSHCOG00000009510smarca4a9686.317Hippocampus_comes
ENSMOCG00000022209Smarca410087.667ENSIPUG00000006107smarca4a10087.667Ictalurus_punctatus
ENSMOCG00000022209Smarca49884.220ENSIPUG00000016346-9883.365Ictalurus_punctatus
ENSMOCG00000022209Smarca410098.887ENSSTOG00000007939SMARCA410098.887Ictidomys_tridecemlineatus
ENSMOCG00000022209Smarca49998.902ENSJJAG00000012877Smarca49998.902Jaculus_jaculus
ENSMOCG00000022209Smarca410085.662ENSKMAG00000011931smarca4a10085.967Kryptolebias_marmoratus
ENSMOCG00000022209Smarca410082.570ENSKMAG00000019518-9886.852Kryptolebias_marmoratus
ENSMOCG00000022209Smarca49585.548ENSLBEG00000017383smarca4a7788.550Labrus_bergylta
ENSMOCG00000022209Smarca49582.764ENSLBEG00000020655-8182.609Labrus_bergylta
ENSMOCG00000022209Smarca45288.305ENSLACG00000015309SMARCA410087.919Latimeria_chalumnae
ENSMOCG00000022209Smarca410087.608ENSLOCG00000007820smarca4a7992.132Lepisosteus_oculatus
ENSMOCG00000022209Smarca410099.134ENSLAFG00000001433SMARCA410099.134Loxodonta_africana
ENSMOCG00000022209Smarca410098.949ENSMFAG00000032146SMARCA49998.949Macaca_fascicularis
ENSMOCG00000022209Smarca410098.949ENSMMUG00000012042SMARCA410098.949Macaca_mulatta
ENSMOCG00000022209Smarca410098.763ENSMNEG00000028512SMARCA410098.763Macaca_nemestrina
ENSMOCG00000022209Smarca410099.072ENSMLEG00000034976SMARCA410099.072Mandrillus_leucophaeus
ENSMOCG00000022209Smarca410086.877ENSMAMG00000009256smarca4a10086.817Mastacembelus_armatus
ENSMOCG00000022209Smarca49982.593ENSMAMG00000002841-9886.372Mastacembelus_armatus
ENSMOCG00000022209Smarca410087.112ENSMZEG00005003889smarca4a10086.930Maylandia_zebra
ENSMOCG00000022209Smarca49485.817ENSMZEG00005023861-9883.511Maylandia_zebra
ENSMOCG00000022209Smarca410099.567ENSMAUG00000020731Smarca410099.567Mesocricetus_auratus
ENSMOCG00000022209Smarca410099.134ENSMICG00000009806SMARCA410099.134Microcebus_murinus
ENSMOCG00000022209Smarca49585.029ENSMMOG00000007571smarca4a9885.367Mola_mola
ENSMOCG00000022209Smarca49997.988ENSMODG00000006287SMARCA49997.988Monodelphis_domestica
ENSMOCG00000022209Smarca48983.149ENSMALG00000021534-8389.792Monopterus_albus
ENSMOCG00000022209Smarca49686.814ENSMALG00000003388smarca4a10086.732Monopterus_albus
ENSMOCG00000022209Smarca410099.567MGP_CAROLIEiJ_G0031879Smarca410099.567Mus_caroli
ENSMOCG00000022209Smarca410099.753ENSMUSG00000032187Smarca410099.753Mus_musculus
ENSMOCG00000022209Smarca410099.134MGP_PahariEiJ_G0014745Smarca410099.134Mus_pahari
ENSMOCG00000022209Smarca410099.567MGP_SPRETEiJ_G0033003Smarca410099.567Mus_spretus
ENSMOCG00000022209Smarca410098.949ENSMPUG00000005711SMARCA410098.949Mustela_putorius_furo
ENSMOCG00000022209Smarca410098.825ENSMLUG00000004491-10098.825Myotis_lucifugus
ENSMOCG00000022209Smarca410098.454ENSNGAG00000021852Smarca410098.454Nannospalax_galili
ENSMOCG00000022209Smarca49586.048ENSNBRG00000011457smarca4a9685.742Neolamprologus_brichardi
ENSMOCG00000022209Smarca410092.769ENSNLEG00000012389SMARCA49893.288Nomascus_leucogenys
ENSMOCG00000022209Smarca48093.103ENSOPRG00000000885-7893.103Ochotona_princeps
ENSMOCG00000022209Smarca410095.153ENSODEG00000017127SMARCA48497.465Octodon_degus
ENSMOCG00000022209Smarca410083.682ENSONIG00000018040-10082.936Oreochromis_niloticus
ENSMOCG00000022209Smarca410088.039ENSONIG00000008196smarca4a10087.638Oreochromis_niloticus
ENSMOCG00000022209Smarca49990.429ENSOCUG00000001787SMARCA49990.429Oryctolagus_cuniculus
ENSMOCG00000022209Smarca49685.786ENSORLG00000015452smarca4a10085.393Oryzias_latipes
ENSMOCG00000022209Smarca49583.386ENSORLG00000003955-9787.219Oryzias_latipes
ENSMOCG00000022209Smarca410085.436ENSORLG00020004611smarca4a10085.375Oryzias_latipes_hni
ENSMOCG00000022209Smarca49583.396ENSORLG00020009728-9787.403Oryzias_latipes_hni
ENSMOCG00000022209Smarca410085.558ENSORLG00015016560smarca4a10085.514Oryzias_latipes_hsok
ENSMOCG00000022209Smarca49983.031ENSORLG00015007739-9982.995Oryzias_latipes_hsok
ENSMOCG00000022209Smarca410086.220ENSOMEG00000007486smarca4a10086.602Oryzias_melastigma
ENSMOCG00000022209Smarca49683.106ENSOMEG00000016626-9983.164Oryzias_melastigma
ENSMOCG00000022209Smarca48996.821ENSOGAG00000016148SMARCA410096.821Otolemur_garnettii
ENSMOCG00000022209Smarca410097.095ENSOARG00000017454SMARCA410097.095Ovis_aries
ENSMOCG00000022209Smarca410098.949ENSPPAG00000043191SMARCA410098.949Pan_paniscus
ENSMOCG00000022209Smarca410099.134ENSPPRG00000000064SMARCA410099.134Panthera_pardus
ENSMOCG00000022209Smarca410098.949ENSPTRG00000010488SMARCA410098.949Pan_troglodytes
ENSMOCG00000022209Smarca410098.887ENSPANG00000011042SMARCA49998.887Papio_anubis
ENSMOCG00000022209Smarca49886.116ENSPKIG00000010087-9886.671Paramormyrops_kingsleyae
ENSMOCG00000022209Smarca410087.561ENSPKIG00000007770SMARCA410087.561Paramormyrops_kingsleyae
ENSMOCG00000022209Smarca410090.315ENSPSIG00000005547SMARCA49990.602Pelodiscus_sinensis
ENSMOCG00000022209Smarca410099.876ENSPEMG00000020389Smarca410099.876Peromyscus_maniculatus_bairdii
ENSMOCG00000022209Smarca410098.021ENSPCIG00000017138SMARCA410098.021Phascolarctos_cinereus
ENSMOCG00000022209Smarca410083.313ENSPFOG00000012930-9983.046Poecilia_formosa
ENSMOCG00000022209Smarca410084.961ENSPFOG00000007892smarca4a10086.157Poecilia_formosa
ENSMOCG00000022209Smarca48289.497ENSPLAG00000018616-8189.787Poecilia_latipinna
ENSMOCG00000022209Smarca410085.021ENSPLAG00000014294smarca4a10086.217Poecilia_latipinna
ENSMOCG00000022209Smarca49984.188ENSPMEG00000008929-9884.250Poecilia_mexicana
ENSMOCG00000022209Smarca49585.897ENSPMEG00000003725smarca4a9786.965Poecilia_mexicana
ENSMOCG00000022209Smarca49785.025ENSPREG00000014608smarca4a10086.094Poecilia_reticulata
ENSMOCG00000022209Smarca49486.447ENSPREG00000014823-9783.812Poecilia_reticulata
ENSMOCG00000022209Smarca49998.963ENSPPYG00000009568SMARCA49998.963Pongo_abelii
ENSMOCG00000022209Smarca47999.338ENSPCAG00000014054SMARCA47799.338Procavia_capensis
ENSMOCG00000022209Smarca410099.072ENSPCOG00000023011SMARCA410099.072Propithecus_coquereli
ENSMOCG00000022209Smarca49597.928ENSPVAG00000007787SMARCA49697.928Pteropus_vampyrus
ENSMOCG00000022209Smarca49786.104ENSPNYG00000000717smarca4a9687.332Pundamilia_nyererei
ENSMOCG00000022209Smarca49586.355ENSPNAG00000006636-9785.980Pygocentrus_nattereri
ENSMOCG00000022209Smarca410099.505ENSRNOG00000009271Smarca410099.505Rattus_norvegicus
ENSMOCG00000022209Smarca410098.887ENSRBIG00000038696SMARCA49998.887Rhinopithecus_bieti
ENSMOCG00000022209Smarca410098.949ENSRROG00000045509SMARCA410098.949Rhinopithecus_roxellana
ENSMOCG00000022209Smarca410098.516ENSSBOG00000026896SMARCA49998.698Saimiri_boliviensis_boliviensis
ENSMOCG00000022209Smarca410098.145ENSSHAG00000001642SMARCA410098.145Sarcophilus_harrisii
ENSMOCG00000022209Smarca410088.053ENSSFOG00015013823smarca410086.909Scleropages_formosus
ENSMOCG00000022209Smarca49681.112ENSSFOG00015009921-9190.585Scleropages_formosus
ENSMOCG00000022209Smarca410081.488ENSSMAG00000014082-9981.283Scophthalmus_maximus
ENSMOCG00000022209Smarca410085.413ENSSMAG00000003200smarca4a10085.172Scophthalmus_maximus
ENSMOCG00000022209Smarca49985.635ENSSDUG00000005388-9586.369Seriola_dumerili
ENSMOCG00000022209Smarca410083.262ENSSDUG00000017298smarca4a10083.476Seriola_dumerili
ENSMOCG00000022209Smarca410086.498ENSSLDG00000024486smarca4a10086.155Seriola_lalandi_dorsalis
ENSMOCG00000022209Smarca49586.801ENSSLDG00000023663-9787.078Seriola_lalandi_dorsalis
ENSMOCG00000022209Smarca46498.765ENSSARG00000013477SMARCA48598.765Sorex_araneus
ENSMOCG00000022209Smarca49592.034ENSSPUG00000004558SMARCA49891.850Sphenodon_punctatus
ENSMOCG00000022209Smarca410086.076ENSSPAG00000004248smarca4a10085.767Stegastes_partitus
ENSMOCG00000022209Smarca410083.018ENSSPAG00000012533-9982.565Stegastes_partitus
ENSMOCG00000022209Smarca410099.134ENSSSCG00000013629SMARCA410099.134Sus_scrofa
ENSMOCG00000022209Smarca45289.929ENSTGUG00000015488-10089.240Taeniopygia_guttata
ENSMOCG00000022209Smarca49581.226ENSTRUG00000001378SMARCA49882.587Takifugu_rubripes
ENSMOCG00000022209Smarca48981.088ENSTRUG00000004885smarca4a10081.033Takifugu_rubripes
ENSMOCG00000022209Smarca410081.735ENSTNIG00000004536SMARCA410083.120Tetraodon_nigroviridis
ENSMOCG00000022209Smarca47384.912ENSTNIG00000004859-10084.561Tetraodon_nigroviridis
ENSMOCG00000022209Smarca49997.195ENSTTRG00000009519SMARCA49997.195Tursiops_truncatus
ENSMOCG00000022209Smarca410099.011ENSUAMG00000014661SMARCA410099.011Ursus_americanus
ENSMOCG00000022209Smarca410096.784ENSUMAG00000022005SMARCA49998.977Ursus_maritimus
ENSMOCG00000022209Smarca410098.949ENSVVUG00000017820SMARCA49798.949Vulpes_vulpes
ENSMOCG00000022209Smarca410086.242ENSXETG00000009355smarca49987.195Xenopus_tropicalis
ENSMOCG00000022209Smarca410083.962ENSXMAG00000007030-9983.453Xiphophorus_maculatus
ENSMOCG00000022209Smarca410086.106ENSXMAG00000006321smarca4a10086.366Xiphophorus_maculatus

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