EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000022211 (Gene tree)
Gene ID: -
Gene Symbol: Parn
Alias: 1200003I18Rik|DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 68371 bases
Position: chr7:52642911-52711281
Accession: 101985699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000026382	R3H	PF01424.22	2.7e-05	1	1
ENSMOCP00000026382	RNA_bind	PF08675.11	3.2e-26	1	1
ENSMOCP00000026382	CAF1	PF04857.20	6.2e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000030258	-	1584	XM_005350340	ENSMOCP00000026382	487 (aa)	XP_005350397	-

Gene Model

Click here to download ENSMOCG00000022211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000022211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000022211	Parn	100	91.296	ENSG00000140694	PARN	91	94.915	Homo_sapiens
ENSMOCG00000022211	Parn	100	91.111	ENSAMEG00000011208	PARN	77	91.111	Ailuropoda_melanoleuca
ENSMOCG00000022211	Parn	100	76.162	ENSACIG00000000619	parn	91	64.384	Amphilophus_citrinellus
ENSMOCG00000022211	Parn	100	78.788	ENSAOCG00000003465	parn	72	78.788	Amphiprion_ocellaris
ENSMOCG00000022211	Parn	87	78.571	ENSAPEG00000010661	parn	83	78.571	Amphiprion_percula
ENSMOCG00000022211	Parn	100	79.798	ENSATEG00000004661	parn	72	79.798	Anabas_testudineus
ENSMOCG00000022211	Parn	99	85.890	ENSAPLG00000013914	PARN	77	85.890	Anas_platyrhynchos
ENSMOCG00000022211	Parn	100	83.434	ENSACAG00000004973	PARN	76	83.434	Anolis_carolinensis
ENSMOCG00000022211	Parn	100	90.688	ENSANAG00000031516	PARN	91	94.915	Aotus_nancymaae
ENSMOCG00000022211	Parn	100	79.192	ENSACLG00000004742	parn	73	79.192	Astatotilapia_calliptera
ENSMOCG00000022211	Parn	100	78.138	ENSAMXG00000012390	parn	81	75.304	Astyanax_mexicanus
ENSMOCG00000022211	Parn	100	87.449	ENSBTAG00000018097	PARN	75	90.531	Bos_taurus
ENSMOCG00000022211	Parn	100	91.296	ENSCJAG00000015866	PARN	91	94.915	Callithrix_jacchus
ENSMOCG00000022211	Parn	100	90.081	ENSCAFG00000018795	PARN	77	90.081	Canis_familiaris
ENSMOCG00000022211	Parn	100	90.486	ENSCAFG00020024126	PARN	77	90.486	Canis_lupus_dingo
ENSMOCG00000022211	Parn	100	91.093	ENSCHIG00000018143	PARN	77	91.093	Capra_hircus
ENSMOCG00000022211	Parn	99	58.691	ENSCAPG00000007984	PARN	82	58.691	Cavia_aperea
ENSMOCG00000022211	Parn	100	89.676	ENSCPOG00000002263	PARN	78	89.676	Cavia_porcellus
ENSMOCG00000022211	Parn	100	91.296	ENSCCAG00000030367	PARN	91	94.915	Cebus_capucinus
ENSMOCG00000022211	Parn	100	91.296	ENSCATG00000041368	PARN	89	91.296	Cercocebus_atys
ENSMOCG00000022211	Parn	100	90.688	ENSCLAG00000015406	PARN	77	90.688	Chinchilla_lanigera
ENSMOCG00000022211	Parn	100	91.296	ENSCSAG00000008142	PARN	77	91.296	Chlorocebus_sabaeus
ENSMOCG00000022211	Parn	87	76.852	ENSCHOG00000007014	PARN	71	76.852	Choloepus_hoffmanni
ENSMOCG00000022211	Parn	87	87.760	ENSCPBG00000006609	PARN	75	87.760	Chrysemys_picta_bellii
ENSMOCG00000022211	Parn	99	44.314	ENSCING00000010142	-	96	44.314	Ciona_intestinalis
ENSMOCG00000022211	Parn	100	78.039	ENSCANG00000028849	-	68	94.915	Colobus_angolensis_palliatus
ENSMOCG00000022211	Parn	100	96.304	ENSCGRG00001012096	Parn	78	96.304	Cricetulus_griseus_chok1gshd
ENSMOCG00000022211	Parn	100	96.304	ENSCGRG00000004939	Parn	78	96.304	Cricetulus_griseus_crigri
ENSMOCG00000022211	Parn	100	76.162	ENSCSEG00000002064	parn	100	61.991	Cynoglossus_semilaevis
ENSMOCG00000022211	Parn	100	78.340	ENSCVAG00000014848	parn	73	78.340	Cyprinodon_variegatus
ENSMOCG00000022211	Parn	100	74.037	ENSDARG00000102634	parn	100	59.259	Danio_rerio
ENSMOCG00000022211	Parn	100	90.688	ENSDNOG00000000833	PARN	87	90.688	Dasypus_novemcinctus
ENSMOCG00000022211	Parn	85	84.411	ENSETEG00000014828	-	69	84.411	Echinops_telfairi
ENSMOCG00000022211	Parn	100	91.093	ENSEASG00005011400	PARN	78	91.093	Equus_asinus_asinus
ENSMOCG00000022211	Parn	100	90.891	ENSECAG00000017792	PARN	78	90.891	Equus_caballus
ENSMOCG00000022211	Parn	82	76.471	ENSEEUG00000010370	PARN	64	76.471	Erinaceus_europaeus
ENSMOCG00000022211	Parn	100	76.113	ENSELUG00000013139	parn	65	76.113	Esox_lucius
ENSMOCG00000022211	Parn	100	91.093	ENSFCAG00000044961	PARN	77	91.093	Felis_catus
ENSMOCG00000022211	Parn	99	85.421	ENSFALG00000003911	PARN	76	85.421	Ficedula_albicollis
ENSMOCG00000022211	Parn	74	30.749	ENSFALG00000012081	PNLDC1	70	30.749	Ficedula_albicollis
ENSMOCG00000022211	Parn	100	90.688	ENSFDAG00000009234	PARN	78	90.688	Fukomys_damarensis
ENSMOCG00000022211	Parn	100	70.833	ENSFHEG00000013738	parn	92	74.576	Fundulus_heteroclitus
ENSMOCG00000022211	Parn	100	76.316	ENSGMOG00000003231	parn	90	76.316	Gadus_morhua
ENSMOCG00000022211	Parn	100	86.640	ENSGALG00000003091	PARN	78	86.640	Gallus_gallus
ENSMOCG00000022211	Parn	100	78.182	ENSGAFG00000011061	parn	72	78.182	Gambusia_affinis
ENSMOCG00000022211	Parn	100	77.126	ENSGACG00000019501	parn	79	77.126	Gasterosteus_aculeatus
ENSMOCG00000022211	Parn	100	91.296	ENSGGOG00000025224	PARN	91	94.915	Gorilla_gorilla
ENSMOCG00000022211	Parn	100	79.192	ENSHBUG00000017906	parn	83	76.908	Haplochromis_burtoni
ENSMOCG00000022211	Parn	100	90.081	ENSHGLG00000010886	PARN	78	90.081	Heterocephalus_glaber_female
ENSMOCG00000022211	Parn	100	90.081	ENSHGLG00100014659	PARN	78	90.081	Heterocephalus_glaber_male
ENSMOCG00000022211	Parn	99	73.975	ENSHCOG00000008683	parn	84	74.385	Hippocampus_comes
ENSMOCG00000022211	Parn	100	63.563	ENSIPUG00000012401	parn	73	63.563	Ictalurus_punctatus
ENSMOCG00000022211	Parn	100	90.283	ENSSTOG00000007519	PARN	78	90.283	Ictidomys_tridecemlineatus
ENSMOCG00000022211	Parn	100	90.283	ENSJJAG00000023049	Parn	79	90.283	Jaculus_jaculus
ENSMOCG00000022211	Parn	100	78.586	ENSKMAG00000009462	parn	73	78.586	Kryptolebias_marmoratus
ENSMOCG00000022211	Parn	100	78.340	ENSLBEG00000009167	parn	77	78.340	Labrus_bergylta
ENSMOCG00000022211	Parn	99	78.367	ENSLACG00000004207	PARN	100	74.764	Latimeria_chalumnae
ENSMOCG00000022211	Parn	100	80.162	ENSLOCG00000000715	parn	72	80.162	Lepisosteus_oculatus
ENSMOCG00000022211	Parn	100	90.283	ENSLAFG00000015036	PARN	78	90.283	Loxodonta_africana
ENSMOCG00000022211	Parn	61	33.117	ENSLAFG00000030189	PNLDC1	89	31.098	Loxodonta_africana
ENSMOCG00000022211	Parn	100	86.640	ENSMFAG00000044852	PARN	75	90.762	Macaca_fascicularis
ENSMOCG00000022211	Parn	100	91.093	ENSMMUG00000018849	PARN	77	91.093	Macaca_mulatta
ENSMOCG00000022211	Parn	100	91.296	ENSMNEG00000045108	PARN	77	91.296	Macaca_nemestrina
ENSMOCG00000022211	Parn	100	91.498	ENSMLEG00000031743	PARN	77	91.498	Mandrillus_leucophaeus
ENSMOCG00000022211	Parn	100	78.384	ENSMAMG00000006939	parn	72	78.384	Mastacembelus_armatus
ENSMOCG00000022211	Parn	100	79.192	ENSMZEG00005013590	parn	84	76.861	Maylandia_zebra
ENSMOCG00000022211	Parn	94	86.853	ENSMGAG00000001004	PARN	73	86.853	Meleagris_gallopavo
ENSMOCG00000022211	Parn	100	88.710	ENSMAUG00000008025	Parn	78	88.710	Mesocricetus_auratus
ENSMOCG00000022211	Parn	100	92.105	ENSMICG00000016053	PARN	91	96.610	Microcebus_murinus
ENSMOCG00000022211	Parn	100	75.960	ENSMMOG00000011333	parn	80	75.960	Mola_mola
ENSMOCG00000022211	Parn	100	89.113	ENSMODG00000004915	PARN	99	89.113	Monodelphis_domestica
ENSMOCG00000022211	Parn	100	78.629	ENSMALG00000019426	parn	84	78.629	Monopterus_albus
ENSMOCG00000022211	Parn	100	95.277	MGP_CAROLIEiJ_G0020466	Parn	78	95.277	Mus_caroli
ENSMOCG00000022211	Parn	66	31.902	ENSMUSG00000073460	Pnldc1	97	30.769	Mus_musculus
ENSMOCG00000022211	Parn	100	95.277	ENSMUSG00000022685	Parn	100	98.780	Mus_musculus
ENSMOCG00000022211	Parn	100	94.251	MGP_PahariEiJ_G0016172	Parn	78	94.251	Mus_pahari
ENSMOCG00000022211	Parn	100	95.277	MGP_SPRETEiJ_G0021361	Parn	78	95.277	Mus_spretus
ENSMOCG00000022211	Parn	100	91.296	ENSMPUG00000014464	PARN	77	91.296	Mustela_putorius_furo
ENSMOCG00000022211	Parn	99	88.259	ENSMLUG00000005414	PARN	100	88.259	Myotis_lucifugus
ENSMOCG00000022211	Parn	100	76.162	ENSNBRG00000006805	parn	84	76.162	Neolamprologus_brichardi
ENSMOCG00000022211	Parn	100	91.093	ENSNLEG00000010241	PARN	91	94.915	Nomascus_leucogenys
ENSMOCG00000022211	Parn	83	76.325	ENSMEUG00000008178	-	64	76.325	Notamacropus_eugenii
ENSMOCG00000022211	Parn	99	85.626	ENSOPRG00000012187	PARN	77	85.626	Ochotona_princeps
ENSMOCG00000022211	Parn	100	82.093	ENSODEG00000001617	PARN	79	82.093	Octodon_degus
ENSMOCG00000022211	Parn	100	79.394	ENSONIG00000000151	parn	76	79.555	Oreochromis_niloticus
ENSMOCG00000022211	Parn	99	90.631	ENSOCUG00000000322	PARN	77	90.631	Oryctolagus_cuniculus
ENSMOCG00000022211	Parn	100	77.935	ENSORLG00020010313	parn	74	77.935	Oryzias_latipes_hni
ENSMOCG00000022211	Parn	100	77.733	ENSORLG00015000300	parn	74	77.733	Oryzias_latipes_hsok
ENSMOCG00000022211	Parn	100	77.935	ENSOMEG00000019555	parn	97	65.455	Oryzias_melastigma
ENSMOCG00000022211	Parn	99	89.613	ENSOGAG00000014626	PARN	100	89.613	Otolemur_garnettii
ENSMOCG00000022211	Parn	99	91.093	ENSOARG00000007574	PARN	100	91.093	Ovis_aries
ENSMOCG00000022211	Parn	100	90.891	ENSPPAG00000031438	PARN	91	94.915	Pan_paniscus
ENSMOCG00000022211	Parn	100	90.891	ENSPPRG00000018583	PARN	77	90.891	Panthera_pardus
ENSMOCG00000022211	Parn	100	91.093	ENSPTIG00000012135	PARN	77	91.093	Panthera_tigris_altaica
ENSMOCG00000022211	Parn	100	90.891	ENSPTRG00000007792	PARN	91	94.915	Pan_troglodytes
ENSMOCG00000022211	Parn	100	87.247	ENSPANG00000020099	PARN	77	87.045	Papio_anubis
ENSMOCG00000022211	Parn	100	77.846	ENSPKIG00000022807	parn	78	73.293	Paramormyrops_kingsleyae
ENSMOCG00000022211	Parn	100	86.842	ENSPSIG00000014804	PARN	77	86.842	Pelodiscus_sinensis
ENSMOCG00000022211	Parn	55	31.868	ENSPSIG00000011419	PNLDC1	85	31.868	Pelodiscus_sinensis
ENSMOCG00000022211	Parn	100	75.506	ENSPMGG00000014431	parn	68	75.506	Periophthalmus_magnuspinnatus
ENSMOCG00000022211	Parn	100	93.018	ENSPEMG00000018439	Parn	78	93.018	Peromyscus_maniculatus_bairdii
ENSMOCG00000022211	Parn	100	65.392	ENSPMAG00000003956	parn	94	65.392	Petromyzon_marinus
ENSMOCG00000022211	Parn	85	80.615	ENSPCIG00000001259	PARN	91	91.525	Phascolarctos_cinereus
ENSMOCG00000022211	Parn	100	78.384	ENSPFOG00000012823	parn	72	78.384	Poecilia_formosa
ENSMOCG00000022211	Parn	100	78.586	ENSPLAG00000006395	parn	72	78.586	Poecilia_latipinna
ENSMOCG00000022211	Parn	100	78.586	ENSPMEG00000007711	parn	72	78.586	Poecilia_mexicana
ENSMOCG00000022211	Parn	100	78.384	ENSPREG00000000147	parn	72	78.384	Poecilia_reticulata
ENSMOCG00000022211	Parn	100	90.524	ENSPPYG00000007123	PARN	77	90.524	Pongo_abelii
ENSMOCG00000022211	Parn	88	81.839	ENSPCAG00000001741	PARN	72	81.839	Procavia_capensis
ENSMOCG00000022211	Parn	100	88.866	ENSPCOG00000019292	PARN	91	96.610	Propithecus_coquereli
ENSMOCG00000022211	Parn	99	86.037	ENSPVAG00000002547	PARN	77	86.037	Pteropus_vampyrus
ENSMOCG00000022211	Parn	100	79.192	ENSPNYG00000006835	parn	83	73.695	Pundamilia_nyererei
ENSMOCG00000022211	Parn	91	77.679	ENSPNAG00000018905	parn	74	77.679	Pygocentrus_nattereri
ENSMOCG00000022211	Parn	66	31.902	ENSRNOG00000023140	Pnldc1	89	30.154	Rattus_norvegicus
ENSMOCG00000022211	Parn	100	94.867	ENSRNOG00000002912	Parn	100	94.059	Rattus_norvegicus
ENSMOCG00000022211	Parn	100	89.271	ENSSBOG00000034726	PARN	77	89.271	Saimiri_boliviensis_boliviensis
ENSMOCG00000022211	Parn	84	87.321	ENSSHAG00000008493	PARN	94	87.321	Sarcophilus_harrisii
ENSMOCG00000022211	Parn	100	79.065	ENSSFOG00015014165	parn	82	77.642	Scleropages_formosus
ENSMOCG00000022211	Parn	100	75.758	ENSSMAG00000000685	parn	81	70.459	Scophthalmus_maximus
ENSMOCG00000022211	Parn	100	78.543	ENSSDUG00000014555	parn	72	78.543	Seriola_dumerili
ENSMOCG00000022211	Parn	88	89.171	ENSSARG00000014339	PARN	75	89.171	Sorex_araneus
ENSMOCG00000022211	Parn	100	87.449	ENSSPUG00000007719	PARN	77	87.449	Sphenodon_punctatus
ENSMOCG00000022211	Parn	100	79.798	ENSSPAG00000007095	parn	80	74.545	Stegastes_partitus
ENSMOCG00000022211	Parn	100	91.296	ENSSSCG00000007878	PARN	69	91.296	Sus_scrofa
ENSMOCG00000022211	Parn	99	85.481	ENSTGUG00000004971	PARN	77	85.481	Taeniopygia_guttata
ENSMOCG00000022211	Parn	71	31.638	ENSTGUG00000011418	PNLDC1	69	30.791	Taeniopygia_guttata
ENSMOCG00000022211	Parn	100	77.576	ENSTNIG00000008252	parn	79	77.576	Tetraodon_nigroviridis
ENSMOCG00000022211	Parn	88	75.172	ENSTBEG00000010407	PARN	75	75.172	Tupaia_belangeri
ENSMOCG00000022211	Parn	98	89.712	ENSTTRG00000002843	PARN	77	89.712	Tursiops_truncatus
ENSMOCG00000022211	Parn	87	77.419	ENSUAMG00000008283	PARN	94	73.394	Ursus_americanus
ENSMOCG00000022211	Parn	100	91.296	ENSUMAG00000004527	PARN	77	91.296	Ursus_maritimus
ENSMOCG00000022211	Parn	99	87.064	ENSVPAG00000008968	PARN	79	87.064	Vicugna_pacos
ENSMOCG00000022211	Parn	100	90.486	ENSVVUG00000019509	PARN	77	90.486	Vulpes_vulpes
ENSMOCG00000022211	Parn	100	79.352	ENSXETG00000010994	parn	94	79.352	Xenopus_tropicalis
ENSMOCG00000022211	Parn	100	74.343	ENSXCOG00000015990	parn	83	74.343	Xiphophorus_couchianus
ENSMOCG00000022211	Parn	100	78.182	ENSXMAG00000014783	parn	72	78.182	Xiphophorus_maculatus