EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000022370 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: HIV Tat-specific factor 1 homolog pseudogene
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 2298 bases
Position: chr1:99653900-99656197
Accession: 101985936
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000026622	RRM_1	PF00076.22	2.7e-16	1	2
ENSMOCP00000026622	RRM_1	PF00076.22	2.7e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000030505	-	2268	-	ENSMOCP00000026622	755 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000022370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000022370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000022370	-	95	85.545	ENSMOCG00000023007	-	99	86.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000022370	-	95	69.467	ENSG00000102241	HTATSF1	100	87.295	Homo_sapiens
ENSMOCG00000022370	-	54	59.434	ENSAPOG00000009823	htatsf1	92	59.434	Acanthochromis_polyacanthus
ENSMOCG00000022370	-	95	69.281	ENSAMEG00000002921	HTATSF1	99	70.866	Ailuropoda_melanoleuca
ENSMOCG00000022370	-	50	61.929	ENSAOCG00000020994	htatsf1	80	61.497	Amphiprion_ocellaris
ENSMOCG00000022370	-	50	61.675	ENSAPEG00000016432	htatsf1	89	59.615	Amphiprion_percula
ENSMOCG00000022370	-	91	58.996	ENSANAG00000027986	-	96	60.168	Aotus_nancymaae
ENSMOCG00000022370	-	89	66.430	ENSANAG00000025458	-	99	66.905	Aotus_nancymaae
ENSMOCG00000022370	-	52	59.574	ENSACLG00000008096	htatsf1	91	59.716	Astatotilapia_calliptera
ENSMOCG00000022370	-	95	69.361	ENSBTAG00000055212	HTATSF1	99	71.186	Bos_taurus
ENSMOCG00000022370	-	96	67.156	ENSBTAG00000032711	HTATSF1	99	69.169	Bos_taurus
ENSMOCG00000022370	-	95	69.361	ENSBTAG00000054942	HTATSF1	99	71.186	Bos_taurus
ENSMOCG00000022370	-	95	70.400	ENSCJAG00000003676	HTATSF1	99	69.973	Callithrix_jacchus
ENSMOCG00000022370	-	95	72.096	ENSCAFG00000023294	HTATSF1	99	73.262	Canis_familiaris
ENSMOCG00000022370	-	95	69.792	ENSCAFG00020024635	HTATSF1	99	71.354	Canis_lupus_dingo
ENSMOCG00000022370	-	95	70.159	ENSCHIG00000000312	HTATSF1	99	71.995	Capra_hircus
ENSMOCG00000022370	-	80	76.144	ENSTSYG00000028876	HTATSF1	99	72.654	Carlito_syrichta
ENSMOCG00000022370	-	95	70.800	ENSCCAG00000022701	-	99	70.872	Cebus_capucinus
ENSMOCG00000022370	-	95	69.410	ENSCCAG00000025329	-	99	69.064	Cebus_capucinus
ENSMOCG00000022370	-	95	69.786	ENSCATG00000029963	HTATSF1	99	71.295	Cercocebus_atys
ENSMOCG00000022370	-	96	68.386	ENSCLAG00000002718	HTATSF1	99	69.588	Chinchilla_lanigera
ENSMOCG00000022370	-	95	69.652	ENSCSAG00000007505	HTATSF1	99	71.162	Chlorocebus_sabaeus
ENSMOCG00000022370	-	50	69.588	ENSCPBG00000026092	HTATSF1	88	68.672	Chrysemys_picta_bellii
ENSMOCG00000022370	-	95	69.478	ENSCANG00000028495	HTATSF1	99	71.162	Colobus_angolensis_palliatus
ENSMOCG00000022370	-	79	81.380	ENSCGRG00001021602	Htatsf1	99	78.036	Cricetulus_griseus_chok1gshd
ENSMOCG00000022370	-	71	74.286	ENSCGRG00000002085	Htatsf1	99	72.152	Cricetulus_griseus_crigri
ENSMOCG00000022370	-	79	74.519	ENSDNOG00000002254	HTATSF1	99	69.565	Dasypus_novemcinctus
ENSMOCG00000022370	-	66	47.535	ENSETEG00000006377	-	69	46.838	Echinops_telfairi
ENSMOCG00000022370	-	81	74.411	ENSEASG00005003440	HTATSF1	99	70.337	Equus_asinus_asinus
ENSMOCG00000022370	-	81	74.411	ENSECAG00000009156	HTATSF1	99	70.337	Equus_caballus
ENSMOCG00000022370	-	95	58.549	ENSEEUG00000010668	HTATSF1	99	61.206	Erinaceus_europaeus
ENSMOCG00000022370	-	96	70.628	ENSFCAG00000031924	HTATSF1	99	72.177	Felis_catus
ENSMOCG00000022370	-	50	66.751	ENSFALG00000003728	HTATSF1	87	66.501	Ficedula_albicollis
ENSMOCG00000022370	-	95	67.333	ENSFDAG00000008617	HTATSF1	99	69.507	Fukomys_damarensis
ENSMOCG00000022370	-	50	66.150	ENSGALG00000006410	HTATSF1	87	64.750	Gallus_gallus
ENSMOCG00000022370	-	95	69.333	ENSGGOG00000026072	HTATSF1	99	70.861	Gorilla_gorilla
ENSMOCG00000022370	-	52	59.574	ENSHBUG00000004392	htatsf1	91	59.716	Haplochromis_burtoni
ENSMOCG00000022370	-	94	68.243	ENSHGLG00000005328	HTATSF1	99	69.705	Heterocephalus_glaber_female
ENSMOCG00000022370	-	50	61.224	ENSHCOG00000009056	htatsf1	90	60.859	Hippocampus_comes
ENSMOCG00000022370	-	96	71.791	ENSSTOG00000012505	HTATSF1	99	73.325	Ictidomys_tridecemlineatus
ENSMOCG00000022370	-	52	43.133	ENSLOCG00000015118	htatsf1	86	42.683	Lepisosteus_oculatus
ENSMOCG00000022370	-	95	68.038	ENSLAFG00000014307	HTATSF1	99	67.901	Loxodonta_africana
ENSMOCG00000022370	-	95	69.920	ENSMFAG00000044705	HTATSF1	99	71.429	Macaca_fascicularis
ENSMOCG00000022370	-	95	69.652	ENSMMUG00000006450	HTATSF1	99	71.295	Macaca_mulatta
ENSMOCG00000022370	-	95	68.011	ENSMNEG00000024084	HTATSF1	99	68.194	Macaca_nemestrina
ENSMOCG00000022370	-	95	69.519	ENSMLEG00000035511	HTATSF1	99	71.162	Mandrillus_leucophaeus
ENSMOCG00000022370	-	50	63.959	ENSMAMG00000021225	htatsf1	83	63.636	Mastacembelus_armatus
ENSMOCG00000022370	-	52	59.574	ENSMZEG00005000485	htatsf1	91	60.190	Maylandia_zebra
ENSMOCG00000022370	-	95	77.675	ENSMAUG00000007235	Htatsf1	99	78.220	Mesocricetus_auratus
ENSMOCG00000022370	-	80	75.929	ENSMICG00000009348	HTATSF1	99	71.448	Microcebus_murinus
ENSMOCG00000022370	-	56	65.654	ENSMODG00000014087	-	94	65.654	Monodelphis_domestica
ENSMOCG00000022370	-	51	58.722	ENSMALG00000019977	htatsf1	94	56.279	Monopterus_albus
ENSMOCG00000022370	-	96	75.629	MGP_CAROLIEiJ_G0033094	Htatsf1	99	77.837	Mus_caroli
ENSMOCG00000022370	-	94	76.383	ENSMUSG00000067873	Htatsf1	99	78.562	Mus_musculus
ENSMOCG00000022370	-	94	76.383	MGP_SPRETEiJ_G0034249	Htatsf1	99	78.562	Mus_spretus
ENSMOCG00000022370	-	96	68.093	ENSMPUG00000001901	HTATSF1	99	69.816	Mustela_putorius_furo
ENSMOCG00000022370	-	95	62.500	ENSMLUG00000009234	-	98	63.941	Myotis_lucifugus
ENSMOCG00000022370	-	95	64.636	ENSMLUG00000028418	-	99	65.563	Myotis_lucifugus
ENSMOCG00000022370	-	94	76.366	ENSNGAG00000017831	Htatsf1	99	78.514	Nannospalax_galili
ENSMOCG00000022370	-	52	59.811	ENSNBRG00000003818	htatsf1	82	61.640	Neolamprologus_brichardi
ENSMOCG00000022370	-	95	69.733	ENSNLEG00000002746	HTATSF1	99	71.162	Nomascus_leucogenys
ENSMOCG00000022370	-	52	59.953	ENSONIG00000008638	htatsf1	91	59.953	Oreochromis_niloticus
ENSMOCG00000022370	-	50	67.708	ENSOANG00000011674	-	94	67.708	Ornithorhynchus_anatinus
ENSMOCG00000022370	-	95	68.961	ENSOCUG00000012570	HTATSF1	99	70.235	Oryctolagus_cuniculus
ENSMOCG00000022370	-	52	60.476	ENSOMEG00000007564	htatsf1	80	62.534	Oryzias_melastigma
ENSMOCG00000022370	-	79	73.607	ENSOGAG00000005565	HTATSF1	99	70.277	Otolemur_garnettii
ENSMOCG00000022370	-	95	69.231	ENSOARG00000011215	-	99	71.039	Ovis_aries
ENSMOCG00000022370	-	96	65.903	ENSOARG00000000481	-	99	67.226	Ovis_aries
ENSMOCG00000022370	-	95	69.467	ENSPPAG00000024268	HTATSF1	99	70.993	Pan_paniscus
ENSMOCG00000022370	-	96	70.227	ENSPPRG00000014209	HTATSF1	99	71.774	Panthera_pardus
ENSMOCG00000022370	-	88	69.020	ENSPTIG00000016887	HTATSF1	95	70.682	Panthera_tigris_altaica
ENSMOCG00000022370	-	95	69.467	ENSPTRG00000044591	HTATSF1	99	70.993	Pan_troglodytes
ENSMOCG00000022370	-	81	81.538	ENSPANG00000010946	HTATSF1	91	81.538	Papio_anubis
ENSMOCG00000022370	-	55	61.758	ENSPKIG00000024852	htatsf1	91	61.758	Paramormyrops_kingsleyae
ENSMOCG00000022370	-	80	84.843	ENSPEMG00000022397	Htatsf1	99	80.107	Peromyscus_maniculatus_bairdii
ENSMOCG00000022370	-	55	63.700	ENSPCIG00000030173	-	98	62.903	Phascolarctos_cinereus
ENSMOCG00000022370	-	56	61.882	ENSPCIG00000018896	-	95	61.882	Phascolarctos_cinereus
ENSMOCG00000022370	-	50	63.065	ENSPFOG00000007871	htatsf1	81	62.434	Poecilia_formosa
ENSMOCG00000022370	-	50	62.563	ENSPLAG00000007532	htatsf1	82	62.299	Poecilia_latipinna
ENSMOCG00000022370	-	50	63.544	ENSPMEG00000000352	htatsf1	82	62.834	Poecilia_mexicana
ENSMOCG00000022370	-	50	63.544	ENSPREG00000007811	htatsf1	82	62.834	Poecilia_reticulata
ENSMOCG00000022370	-	80	74.798	ENSPPYG00000020765	HTATSF1	83	74.803	Pongo_abelii
ENSMOCG00000022370	-	81	65.850	ENSPCAG00000010576	HTATSF1	99	59.299	Procavia_capensis
ENSMOCG00000022370	-	95	71.504	ENSPCOG00000021823	HTATSF1	99	73.077	Propithecus_coquereli
ENSMOCG00000022370	-	94	65.276	ENSPVAG00000010281	HTATSF1	99	65.437	Pteropus_vampyrus
ENSMOCG00000022370	-	52	59.811	ENSPNYG00000016693	htatsf1	91	60.095	Pundamilia_nyererei
ENSMOCG00000022370	-	79	82.212	ENSRNOG00000027761	Htatsf1	99	78.646	Rattus_norvegicus
ENSMOCG00000022370	-	95	59.973	ENSRBIG00000035486	HTATSF1	99	60.956	Rhinopithecus_bieti
ENSMOCG00000022370	-	95	69.920	ENSRROG00000021939	HTATSF1	99	71.429	Rhinopithecus_roxellana
ENSMOCG00000022370	-	95	68.952	ENSSBOG00000027186	-	99	70.470	Saimiri_boliviensis_boliviensis
ENSMOCG00000022370	-	95	66.888	ENSSBOG00000017914	-	99	67.957	Saimiri_boliviensis_boliviensis
ENSMOCG00000022370	-	52	66.583	ENSSHAG00000018908	-	88	66.583	Sarcophilus_harrisii
ENSMOCG00000022370	-	50	68.848	ENSSHAG00000006440	-	99	67.866	Sarcophilus_harrisii
ENSMOCG00000022370	-	50	62.760	ENSSFOG00015012002	htatsf1	82	62.760	Scleropages_formosus
ENSMOCG00000022370	-	52	59.233	ENSSLDG00000016880	htatsf1	93	58.411	Seriola_lalandi_dorsalis
ENSMOCG00000022370	-	94	62.963	ENSSARG00000005193	HTATSF1	97	62.813	Sorex_araneus
ENSMOCG00000022370	-	50	66.234	ENSSPUG00000014767	HTATSF1	84	66.234	Sphenodon_punctatus
ENSMOCG00000022370	-	51	62.779	ENSSPAG00000000732	htatsf1	92	59.535	Stegastes_partitus
ENSMOCG00000022370	-	80	69.118	ENSSSCG00000023062	HTATSF1	99	65.430	Sus_scrofa
ENSMOCG00000022370	-	51	61.179	ENSTNIG00000016140	htatsf1	83	60.950	Tetraodon_nigroviridis
ENSMOCG00000022370	-	86	62.481	ENSTTRG00000002269	HTATSF1	97	64.912	Tursiops_truncatus
ENSMOCG00000022370	-	96	70.839	ENSUAMG00000012048	HTATSF1	99	72.617	Ursus_americanus
ENSMOCG00000022370	-	96	69.271	ENSUMAG00000010393	HTATSF1	99	70.866	Ursus_maritimus
ENSMOCG00000022370	-	87	64.040	ENSVPAG00000004569	HTATSF1	99	64.892	Vicugna_pacos
ENSMOCG00000022370	-	95	69.661	ENSVVUG00000024802	HTATSF1	99	71.560	Vulpes_vulpes
ENSMOCG00000022370	-	50	66.053	ENSXCOG00000006912	htatsf1	82	65.460	Xiphophorus_couchianus
ENSMOCG00000022370	-	50	65.365	ENSXMAG00000000490	htatsf1	82	64.835	Xiphophorus_maculatus