EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000022613 (Gene tree)
Gene ID: 101985752
Gene Symbol: Rpusd3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 4948 bases
Position: chrJH996431.1:27340888-27345835
Accession: 101985752
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000026970	PseudoU_synth_2	PF00849.22	8.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000030865	-	1241	XM_005365006	ENSMOCP00000026970	344 (aa)	XP_005365063	UPI00038BF966

Gene Model

Click here to download ENSMOCG00000022613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000022613's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000022613	Rpusd3	99	72.727	ENSG00000156990	RPUSD3	97	72.727	Homo_sapiens
ENSMOCG00000022613	Rpusd3	100	70.058	ENSAMEG00000016227	RPUSD3	98	70.058	Ailuropoda_melanoleuca
ENSMOCG00000022613	Rpusd3	81	53.025	ENSACAG00000009836	RPUSD3	80	53.025	Anolis_carolinensis
ENSMOCG00000022613	Rpusd3	54	73.797	ENSANAG00000038118	-	89	73.797	Aotus_nancymaae
ENSMOCG00000022613	Rpusd3	79	51.579	ENSANAG00000007127	-	96	51.724	Aotus_nancymaae
ENSMOCG00000022613	Rpusd3	56	75.916	ENSANAG00000019945	-	76	75.916	Aotus_nancymaae
ENSMOCG00000022613	Rpusd3	99	73.021	ENSBTAG00000007968	RPUSD3	99	73.021	Bos_taurus
ENSMOCG00000022613	Rpusd3	100	70.058	ENSCAFG00000029733	RPUSD3	98	70.058	Canis_familiaris
ENSMOCG00000022613	Rpusd3	100	70.058	ENSCAFG00020008582	RPUSD3	97	71.384	Canis_lupus_dingo
ENSMOCG00000022613	Rpusd3	99	72.141	ENSCHIG00000026027	RPUSD3	99	72.141	Capra_hircus
ENSMOCG00000022613	Rpusd3	98	67.836	ENSTSYG00000009994	RPUSD3	97	67.836	Carlito_syrichta
ENSMOCG00000022613	Rpusd3	76	73.764	ENSCAPG00000017559	RPUSD3	99	73.764	Cavia_aperea
ENSMOCG00000022613	Rpusd3	99	63.265	ENSCPOG00000037956	RPUSD3	90	63.265	Cavia_porcellus
ENSMOCG00000022613	Rpusd3	99	73.021	ENSCCAG00000029530	RPUSD3	97	73.021	Cebus_capucinus
ENSMOCG00000022613	Rpusd3	99	73.607	ENSCATG00000036939	RPUSD3	97	73.607	Cercocebus_atys
ENSMOCG00000022613	Rpusd3	99	72.727	ENSCSAG00000010506	RPUSD3	97	72.727	Chlorocebus_sabaeus
ENSMOCG00000022613	Rpusd3	51	77.679	ENSCHOG00000010151	-	67	77.679	Choloepus_hoffmanni
ENSMOCG00000022613	Rpusd3	61	54.762	ENSCPBG00000008825	RPUSD3	95	52.140	Chrysemys_picta_bellii
ENSMOCG00000022613	Rpusd3	98	73.887	ENSCANG00000040711	RPUSD3	95	73.887	Colobus_angolensis_palliatus
ENSMOCG00000022613	Rpusd3	100	87.209	ENSCGRG00001004923	Rpusd3	95	87.209	Cricetulus_griseus_chok1gshd
ENSMOCG00000022613	Rpusd3	100	87.209	ENSCGRG00000018315	Rpusd3	100	87.209	Cricetulus_griseus_crigri
ENSMOCG00000022613	Rpusd3	97	72.537	ENSDNOG00000039160	RPUSD3	88	72.537	Dasypus_novemcinctus
ENSMOCG00000022613	Rpusd3	76	71.910	ENSDORG00000026827	Rpusd3	92	71.910	Dipodomys_ordii
ENSMOCG00000022613	Rpusd3	99	66.667	ENSETEG00000006538	RPUSD3	96	66.667	Echinops_telfairi
ENSMOCG00000022613	Rpusd3	63	34.513	ENSEBUG00000015605	RPUSD3	74	34.513	Eptatretus_burgeri
ENSMOCG00000022613	Rpusd3	100	72.965	ENSEASG00005014160	RPUSD3	96	72.965	Equus_asinus_asinus
ENSMOCG00000022613	Rpusd3	100	73.256	ENSECAG00000019988	RPUSD3	96	73.256	Equus_caballus
ENSMOCG00000022613	Rpusd3	98	54.942	ENSEEUG00000007353	RPUSD3	96	54.942	Erinaceus_europaeus
ENSMOCG00000022613	Rpusd3	100	70.640	ENSFCAG00000014199	RPUSD3	98	70.640	Felis_catus
ENSMOCG00000022613	Rpusd3	80	49.458	ENSFALG00000012968	RPUSD3	100	49.458	Ficedula_albicollis
ENSMOCG00000022613	Rpusd3	77	73.864	ENSFDAG00000008350	RPUSD3	81	73.864	Fukomys_damarensis
ENSMOCG00000022613	Rpusd3	63	56.944	ENSGAGG00000007493	RPUSD3	82	53.992	Gopherus_agassizii
ENSMOCG00000022613	Rpusd3	99	73.021	ENSGGOG00000013120	RPUSD3	97	73.021	Gorilla_gorilla
ENSMOCG00000022613	Rpusd3	100	58.612	ENSHGLG00000011722	RPUSD3	100	58.612	Heterocephalus_glaber_female
ENSMOCG00000022613	Rpusd3	100	58.612	ENSHGLG00100016038	RPUSD3	100	58.612	Heterocephalus_glaber_male
ENSMOCG00000022613	Rpusd3	100	69.767	ENSSTOG00000002125	RPUSD3	98	69.767	Ictidomys_tridecemlineatus
ENSMOCG00000022613	Rpusd3	100	72.384	ENSJJAG00000012679	Rpusd3	100	72.384	Jaculus_jaculus
ENSMOCG00000022613	Rpusd3	99	71.848	ENSLAFG00000017501	RPUSD3	99	71.848	Loxodonta_africana
ENSMOCG00000022613	Rpusd3	99	73.021	ENSMFAG00000032407	RPUSD3	97	73.021	Macaca_fascicularis
ENSMOCG00000022613	Rpusd3	99	69.208	ENSMMUG00000010628	RPUSD3	96	76.375	Macaca_mulatta
ENSMOCG00000022613	Rpusd3	99	73.314	ENSMNEG00000040308	RPUSD3	97	73.314	Macaca_nemestrina
ENSMOCG00000022613	Rpusd3	99	73.314	ENSMLEG00000033940	RPUSD3	97	73.314	Mandrillus_leucophaeus
ENSMOCG00000022613	Rpusd3	100	86.628	ENSMAUG00000015473	Rpusd3	100	86.628	Mesocricetus_auratus
ENSMOCG00000022613	Rpusd3	96	71.903	ENSMICG00000002315	RPUSD3	96	71.903	Microcebus_murinus
ENSMOCG00000022613	Rpusd3	94	53.495	ENSMODG00000005210	RPUSD3	79	56.291	Monodelphis_domestica
ENSMOCG00000022613	Rpusd3	100	83.430	MGP_CAROLIEiJ_G0028725	Rpusd3	100	83.430	Mus_caroli
ENSMOCG00000022613	Rpusd3	100	84.593	ENSMUSG00000051169	Rpusd3	100	84.593	Mus_musculus
ENSMOCG00000022613	Rpusd3	100	84.012	MGP_PahariEiJ_G0022476	Rpusd3	100	84.012	Mus_pahari
ENSMOCG00000022613	Rpusd3	100	83.721	MGP_SPRETEiJ_G0029753	Rpusd3	100	83.721	Mus_spretus
ENSMOCG00000022613	Rpusd3	100	68.895	ENSMPUG00000017132	RPUSD3	98	68.895	Mustela_putorius_furo
ENSMOCG00000022613	Rpusd3	100	73.256	ENSMLUG00000006135	RPUSD3	99	73.256	Myotis_lucifugus
ENSMOCG00000022613	Rpusd3	99	76.316	ENSNGAG00000023704	Rpusd3	99	76.316	Nannospalax_galili
ENSMOCG00000022613	Rpusd3	97	60.534	ENSNLEG00000004214	RPUSD3	95	72.772	Nomascus_leucogenys
ENSMOCG00000022613	Rpusd3	76	62.452	ENSMEUG00000013098	-	100	62.452	Notamacropus_eugenii
ENSMOCG00000022613	Rpusd3	96	59.215	ENSOPRG00000002300	RPUSD3	94	59.215	Ochotona_princeps
ENSMOCG00000022613	Rpusd3	77	73.485	ENSODEG00000018137	RPUSD3	91	73.485	Octodon_degus
ENSMOCG00000022613	Rpusd3	83	47.183	ENSOANG00000012081	-	99	47.183	Ornithorhynchus_anatinus
ENSMOCG00000022613	Rpusd3	100	60.057	ENSOCUG00000027885	RPUSD3	100	60.057	Oryctolagus_cuniculus
ENSMOCG00000022613	Rpusd3	91	73.248	ENSOGAG00000012592	RPUSD3	100	73.248	Otolemur_garnettii
ENSMOCG00000022613	Rpusd3	99	73.607	ENSOARG00000005928	RPUSD3	97	73.607	Ovis_aries
ENSMOCG00000022613	Rpusd3	99	72.434	ENSPPAG00000038083	RPUSD3	97	72.434	Pan_paniscus
ENSMOCG00000022613	Rpusd3	100	71.676	ENSPPRG00000024433	RPUSD3	98	71.676	Panthera_pardus
ENSMOCG00000022613	Rpusd3	100	71.512	ENSPTIG00000006828	RPUSD3	100	71.512	Panthera_tigris_altaica
ENSMOCG00000022613	Rpusd3	99	72.434	ENSPTRG00000051760	RPUSD3	97	72.434	Pan_troglodytes
ENSMOCG00000022613	Rpusd3	99	73.607	ENSPANG00000023885	RPUSD3	97	73.607	Papio_anubis
ENSMOCG00000022613	Rpusd3	100	86.919	ENSPEMG00000017245	Rpusd3	100	86.919	Peromyscus_maniculatus_bairdii
ENSMOCG00000022613	Rpusd3	84	59.722	ENSPCIG00000021901	RPUSD3	84	59.722	Phascolarctos_cinereus
ENSMOCG00000022613	Rpusd3	99	72.727	ENSPPYG00000013676	RPUSD3	97	72.727	Pongo_abelii
ENSMOCG00000022613	Rpusd3	82	54.093	ENSPCAG00000013731	-	97	54.093	Procavia_capensis
ENSMOCG00000022613	Rpusd3	99	74.041	ENSPCOG00000018314	RPUSD3	96	74.041	Propithecus_coquereli
ENSMOCG00000022613	Rpusd3	100	70.640	ENSPVAG00000011107	RPUSD3	98	70.640	Pteropus_vampyrus
ENSMOCG00000022613	Rpusd3	100	79.942	ENSRNOG00000009084	Rpusd3	100	79.942	Rattus_norvegicus
ENSMOCG00000022613	Rpusd3	98	73.887	ENSRBIG00000041230	RPUSD3	95	73.887	Rhinopithecus_bieti
ENSMOCG00000022613	Rpusd3	98	73.887	ENSRROG00000043328	RPUSD3	95	73.887	Rhinopithecus_roxellana
ENSMOCG00000022613	Rpusd3	99	71.554	ENSSBOG00000036106	RPUSD3	97	71.554	Saimiri_boliviensis_boliviensis
ENSMOCG00000022613	Rpusd3	87	56.711	ENSSHAG00000015536	RPUSD3	96	56.711	Sarcophilus_harrisii
ENSMOCG00000022613	Rpusd3	99	70.968	ENSSSCG00000011555	RPUSD3	97	70.968	Sus_scrofa
ENSMOCG00000022613	Rpusd3	68	52.361	ENSTGUG00000008744	RPUSD3	95	51.351	Taeniopygia_guttata
ENSMOCG00000022613	Rpusd3	82	71.886	ENSTBEG00000000176	RPUSD3	97	71.886	Tupaia_belangeri
ENSMOCG00000022613	Rpusd3	99	72.141	ENSTTRG00000007544	RPUSD3	97	72.141	Tursiops_truncatus
ENSMOCG00000022613	Rpusd3	91	73.248	ENSUAMG00000011354	RPUSD3	98	73.248	Ursus_americanus
ENSMOCG00000022613	Rpusd3	100	70.640	ENSUMAG00000018830	RPUSD3	98	70.640	Ursus_maritimus
ENSMOCG00000022613	Rpusd3	100	70.930	ENSVVUG00000023735	RPUSD3	100	70.930	Vulpes_vulpes
ENSMOCG00000022613	Rpusd3	80	48.201	ENSXETG00000023546	rpusd3	98	48.201	Xenopus_tropicalis