EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000023007 (Gene tree)
Gene ID: 101981572
Gene Symbol: -
Alias: -
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 13529 bases
Position: chrX:12897628-12911156
Accession: 101981572
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000027569	RRM_1	PF00076.22	1.3e-16	1	2
ENSMOCP00000027569	RRM_1	PF00076.22	1.3e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000031476	-	4059	XM_005358497	ENSMOCP00000027569	753 (aa)	XP_005358554	UPI00038C2D09

Gene Model

Click here to download ENSMOCG00000023007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000023007's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000023007	-	99	86.394	ENSMOCG00000022370	-	95	85.545

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000023007	-	99	71.742	ENSG00000102241	HTATSF1	100	88.525	Homo_sapiens
ENSMOCG00000023007	-	54	62.175	ENSAPOG00000009823	htatsf1	81	65.312	Acanthochromis_polyacanthus
ENSMOCG00000023007	-	99	71.701	ENSAMEG00000002921	HTATSF1	99	71.681	Ailuropoda_melanoleuca
ENSMOCG00000023007	-	53	61.848	ENSACIG00000020459	htatsf1	82	63.467	Amphilophus_citrinellus
ENSMOCG00000023007	-	50	63.868	ENSAOCG00000020994	htatsf1	80	63.807	Amphiprion_ocellaris
ENSMOCG00000023007	-	50	64.631	ENSAPEG00000016432	htatsf1	89	62.410	Amphiprion_percula
ENSMOCG00000023007	-	95	62.943	ENSANAG00000027986	-	97	62.670	Aotus_nancymaae
ENSMOCG00000023007	-	94	69.638	ENSANAG00000025458	-	99	69.306	Aotus_nancymaae
ENSMOCG00000023007	-	52	63.107	ENSACLG00000008096	htatsf1	89	63.107	Astatotilapia_calliptera
ENSMOCG00000023007	-	50	64.631	ENSAMXG00000008387	htatsf1	79	64.171	Astyanax_mexicanus
ENSMOCG00000023007	-	99	71.083	ENSBTAG00000054942	HTATSF1	99	65.371	Bos_taurus
ENSMOCG00000023007	-	99	67.759	ENSBTAG00000032711	HTATSF1	99	70.249	Bos_taurus
ENSMOCG00000023007	-	99	71.083	ENSBTAG00000055212	HTATSF1	99	65.371	Bos_taurus
ENSMOCG00000023007	-	99	72.715	ENSCJAG00000003676	HTATSF1	99	71.855	Callithrix_jacchus
ENSMOCG00000023007	-	99	72.822	ENSCAFG00000023294	HTATSF1	99	72.962	Canis_familiaris
ENSMOCG00000023007	-	99	71.827	ENSCAFG00020024635	HTATSF1	99	71.808	Canis_lupus_dingo
ENSMOCG00000023007	-	99	72.621	ENSCHIG00000000312	HTATSF1	99	72.962	Capra_hircus
ENSMOCG00000023007	-	99	73.316	ENSTSYG00000028876	HTATSF1	99	73.919	Carlito_syrichta
ENSMOCG00000023007	-	99	69.582	ENSCCAG00000025329	-	99	70.013	Cebus_capucinus
ENSMOCG00000023007	-	99	73.072	ENSCCAG00000022701	-	99	72.680	Cebus_capucinus
ENSMOCG00000023007	-	100	71.575	ENSCATG00000029963	HTATSF1	100	72.809	Cercocebus_atys
ENSMOCG00000023007	-	99	71.005	ENSCLAG00000002718	HTATSF1	99	71.206	Chinchilla_lanigera
ENSMOCG00000023007	-	100	71.703	ENSCSAG00000007505	HTATSF1	100	72.938	Chlorocebus_sabaeus
ENSMOCG00000023007	-	50	70.543	ENSCPBG00000026092	HTATSF1	80	71.271	Chrysemys_picta_bellii
ENSMOCG00000023007	-	100	71.667	ENSCANG00000028495	HTATSF1	100	72.727	Colobus_angolensis_palliatus
ENSMOCG00000023007	-	100	77.638	ENSCGRG00001021602	Htatsf1	100	80.025	Cricetulus_griseus_chok1gshd
ENSMOCG00000023007	-	92	71.623	ENSCGRG00000002085	Htatsf1	100	74.079	Cricetulus_griseus_crigri
ENSMOCG00000023007	-	50	64.706	ENSCVAG00000014070	htatsf1	81	63.807	Cyprinodon_variegatus
ENSMOCG00000023007	-	50	63.636	ENSDARG00000056649	htatsf1	80	62.670	Danio_rerio
ENSMOCG00000023007	-	99	70.218	ENSDNOG00000002254	HTATSF1	99	70.102	Dasypus_novemcinctus
ENSMOCG00000023007	-	65	49.495	ENSETEG00000006377	-	66	48.996	Echinops_telfairi
ENSMOCG00000023007	-	99	68.568	ENSEASG00005003440	HTATSF1	99	68.719	Equus_asinus_asinus
ENSMOCG00000023007	-	99	68.441	ENSECAG00000009156	HTATSF1	99	68.593	Equus_caballus
ENSMOCG00000023007	-	99	61.154	ENSEEUG00000010668	HTATSF1	99	61.911	Erinaceus_europaeus
ENSMOCG00000023007	-	99	72.093	ENSFCAG00000031924	HTATSF1	99	72.150	Felis_catus
ENSMOCG00000023007	-	51	67.677	ENSFALG00000003728	HTATSF1	87	67.160	Ficedula_albicollis
ENSMOCG00000023007	-	99	69.908	ENSFDAG00000008617	HTATSF1	99	70.337	Fukomys_damarensis
ENSMOCG00000023007	-	50	65.903	ENSFHEG00000020286	htatsf1	83	65.067	Fundulus_heteroclitus
ENSMOCG00000023007	-	50	68.653	ENSGALG00000006410	HTATSF1	84	68.653	Gallus_gallus
ENSMOCG00000023007	-	50	63.500	ENSGAFG00000003041	htatsf1	82	62.565	Gambusia_affinis
ENSMOCG00000023007	-	50	64.083	ENSGACG00000020459	htatsf1	82	63.415	Gasterosteus_aculeatus
ENSMOCG00000023007	-	99	71.613	ENSGGOG00000026072	HTATSF1	100	73.102	Gorilla_gorilla
ENSMOCG00000023007	-	52	63.107	ENSHBUG00000004392	htatsf1	89	63.107	Haplochromis_burtoni
ENSMOCG00000023007	-	98	70.000	ENSHGLG00000005328	HTATSF1	99	70.298	Heterocephalus_glaber_female
ENSMOCG00000023007	-	50	62.500	ENSHCOG00000009056	htatsf1	90	62.121	Hippocampus_comes
ENSMOCG00000023007	-	50	65.879	ENSIPUG00000017828	htatsf1	76	65.746	Ictalurus_punctatus
ENSMOCG00000023007	-	99	75.165	ENSSTOG00000012505	HTATSF1	99	75.033	Ictidomys_tridecemlineatus
ENSMOCG00000023007	-	50	65.306	ENSKMAG00000007622	htatsf1	81	64.706	Kryptolebias_marmoratus
ENSMOCG00000023007	-	50	66.579	ENSLACG00000015989	HTATSF1	80	66.298	Latimeria_chalumnae
ENSMOCG00000023007	-	53	44.337	ENSLOCG00000015118	htatsf1	86	43.902	Lepisosteus_oculatus
ENSMOCG00000023007	-	99	65.150	ENSLAFG00000014307	HTATSF1	90	73.270	Loxodonta_africana
ENSMOCG00000023007	-	100	71.703	ENSMFAG00000044705	HTATSF1	100	72.938	Macaca_fascicularis
ENSMOCG00000023007	-	100	71.575	ENSMMUG00000006450	HTATSF1	100	72.809	Macaca_mulatta
ENSMOCG00000023007	-	100	70.395	ENSMNEG00000024084	HTATSF1	100	70.789	Macaca_nemestrina
ENSMOCG00000023007	-	100	71.575	ENSMLEG00000035511	HTATSF1	100	72.809	Mandrillus_leucophaeus
ENSMOCG00000023007	-	50	64.377	ENSMAMG00000021225	htatsf1	83	64.075	Mastacembelus_armatus
ENSMOCG00000023007	-	52	63.107	ENSMZEG00005000485	htatsf1	89	63.107	Maylandia_zebra
ENSMOCG00000023007	-	100	80.699	ENSMAUG00000007235	Htatsf1	100	80.570	Mesocricetus_auratus
ENSMOCG00000023007	-	99	72.144	ENSMICG00000009348	HTATSF1	99	72.144	Microcebus_murinus
ENSMOCG00000023007	-	52	63.017	ENSMMOG00000011013	htatsf1	90	63.017	Mola_mola
ENSMOCG00000023007	-	56	66.511	ENSMODG00000014087	-	94	66.511	Monodelphis_domestica
ENSMOCG00000023007	-	52	61.084	ENSMALG00000019977	htatsf1	88	61.084	Monopterus_albus
ENSMOCG00000023007	-	100	78.137	MGP_CAROLIEiJ_G0033094	Htatsf1	100	79.172	Mus_caroli
ENSMOCG00000023007	-	98	79.260	ENSMUSG00000067873	Htatsf1	100	80.207	Mus_musculus
ENSMOCG00000023007	-	98	79.260	MGP_SPRETEiJ_G0034249	Htatsf1	100	80.207	Mus_spretus
ENSMOCG00000023007	-	99	70.113	ENSMPUG00000001901	HTATSF1	99	70.291	Mustela_putorius_furo
ENSMOCG00000023007	-	99	64.163	ENSMLUG00000009234	-	100	63.057	Myotis_lucifugus
ENSMOCG00000023007	-	99	66.495	ENSMLUG00000028418	-	99	65.173	Myotis_lucifugus
ENSMOCG00000023007	-	98	79.679	ENSNGAG00000017831	Htatsf1	99	79.737	Nannospalax_galili
ENSMOCG00000023007	-	51	63.081	ENSNBRG00000003818	htatsf1	82	63.395	Neolamprologus_brichardi
ENSMOCG00000023007	-	99	71.484	ENSNLEG00000002746	HTATSF1	99	72.481	Nomascus_leucogenys
ENSMOCG00000023007	-	50	70.856	ENSMEUG00000004133	-	86	70.225	Notamacropus_eugenii
ENSMOCG00000023007	-	52	62.621	ENSONIG00000008638	htatsf1	82	63.130	Oreochromis_niloticus
ENSMOCG00000023007	-	100	70.670	ENSOCUG00000012570	HTATSF1	100	70.328	Oryctolagus_cuniculus
ENSMOCG00000023007	-	98	70.169	ENSOGAG00000005565	HTATSF1	99	70.626	Otolemur_garnettii
ENSMOCG00000023007	-	99	70.955	ENSOARG00000011215	-	99	65.371	Ovis_aries
ENSMOCG00000023007	-	99	67.848	ENSOARG00000000481	-	99	67.722	Ovis_aries
ENSMOCG00000023007	-	99	71.742	ENSPPAG00000024268	HTATSF1	100	73.230	Pan_paniscus
ENSMOCG00000023007	-	99	71.576	ENSPPRG00000014209	HTATSF1	99	71.891	Panthera_pardus
ENSMOCG00000023007	-	93	70.236	ENSPTIG00000016887	HTATSF1	95	70.572	Panthera_tigris_altaica
ENSMOCG00000023007	-	99	71.742	ENSPTRG00000044591	HTATSF1	100	73.230	Pan_troglodytes
ENSMOCG00000023007	-	100	61.204	ENSPANG00000010946	HTATSF1	100	61.923	Papio_anubis
ENSMOCG00000023007	-	50	67.553	ENSPKIG00000024852	htatsf1	79	67.039	Paramormyrops_kingsleyae
ENSMOCG00000023007	-	50	64.721	ENSPMGG00000006172	htatsf1	82	64.096	Periophthalmus_magnuspinnatus
ENSMOCG00000023007	-	98	80.317	ENSPEMG00000022397	Htatsf1	99	82.315	Peromyscus_maniculatus_bairdii
ENSMOCG00000023007	-	56	62.118	ENSPCIG00000018896	-	95	62.118	Phascolarctos_cinereus
ENSMOCG00000023007	-	53	65.693	ENSPCIG00000030173	-	83	68.033	Phascolarctos_cinereus
ENSMOCG00000023007	-	50	63.819	ENSPFOG00000007871	htatsf1	81	63.228	Poecilia_formosa
ENSMOCG00000023007	-	51	62.562	ENSPLAG00000007532	htatsf1	82	63.102	Poecilia_latipinna
ENSMOCG00000023007	-	50	64.467	ENSPMEG00000000352	htatsf1	82	63.904	Poecilia_mexicana
ENSMOCG00000023007	-	50	64.213	ENSPREG00000007811	htatsf1	82	63.636	Poecilia_reticulata
ENSMOCG00000023007	-	82	76.063	ENSPPYG00000020765	HTATSF1	82	76.850	Pongo_abelii
ENSMOCG00000023007	-	93	63.136	ENSPCAG00000010576	HTATSF1	100	59.711	Procavia_capensis
ENSMOCG00000023007	-	99	73.677	ENSPCOG00000021823	HTATSF1	99	74.065	Propithecus_coquereli
ENSMOCG00000023007	-	99	63.399	ENSPVAG00000010281	HTATSF1	99	63.171	Pteropus_vampyrus
ENSMOCG00000023007	-	52	63.196	ENSPNYG00000016693	htatsf1	89	63.196	Pundamilia_nyererei
ENSMOCG00000023007	-	50	66.400	ENSPNAG00000006166	htatsf1	79	66.106	Pygocentrus_nattereri
ENSMOCG00000023007	-	99	78.145	ENSRNOG00000027761	Htatsf1	99	80.051	Rattus_norvegicus
ENSMOCG00000023007	-	100	62.100	ENSRBIG00000035486	HTATSF1	100	62.484	Rhinopithecus_bieti
ENSMOCG00000023007	-	100	71.575	ENSRROG00000021939	HTATSF1	100	72.471	Rhinopithecus_roxellana
ENSMOCG00000023007	-	99	69.452	ENSSBOG00000017914	-	99	69.100	Saimiri_boliviensis_boliviensis
ENSMOCG00000023007	-	100	71.151	ENSSBOG00000027186	-	100	72.172	Saimiri_boliviensis_boliviensis
ENSMOCG00000023007	-	52	66.667	ENSSHAG00000018908	-	88	67.085	Sarcophilus_harrisii
ENSMOCG00000023007	-	50	69.474	ENSSHAG00000006440	-	99	68.475	Sarcophilus_harrisii
ENSMOCG00000023007	-	50	64.156	ENSSFOG00015012002	htatsf1	82	64.416	Scleropages_formosus
ENSMOCG00000023007	-	52	60.911	ENSSLDG00000016880	htatsf1	93	59.813	Seriola_lalandi_dorsalis
ENSMOCG00000023007	-	98	60.397	ENSSARG00000005193	HTATSF1	83	66.881	Sorex_araneus
ENSMOCG00000023007	-	50	68.490	ENSSPUG00000014767	HTATSF1	84	68.490	Sphenodon_punctatus
ENSMOCG00000023007	-	51	63.682	ENSSPAG00000000732	htatsf1	92	60.698	Stegastes_partitus
ENSMOCG00000023007	-	99	66.494	ENSSSCG00000023062	HTATSF1	99	66.882	Sus_scrofa
ENSMOCG00000023007	-	50	64.706	ENSTRUG00000013383	htatsf1	83	64.075	Takifugu_rubripes
ENSMOCG00000023007	-	51	62.594	ENSTNIG00000016140	htatsf1	83	62.466	Tetraodon_nigroviridis
ENSMOCG00000023007	-	86	63.759	ENSTTRG00000002269	HTATSF1	93	65.428	Tursiops_truncatus
ENSMOCG00000023007	-	99	72.610	ENSUAMG00000012048	HTATSF1	99	72.868	Ursus_americanus
ENSMOCG00000023007	-	99	71.429	ENSUMAG00000010393	HTATSF1	99	71.934	Ursus_maritimus
ENSMOCG00000023007	-	91	66.243	ENSVPAG00000004569	HTATSF1	99	65.508	Vicugna_pacos
ENSMOCG00000023007	-	99	71.447	ENSVVUG00000024802	HTATSF1	99	71.429	Vulpes_vulpes
ENSMOCG00000023007	-	50	66.755	ENSXCOG00000006912	htatsf1	82	66.295	Xiphophorus_couchianus
ENSMOCG00000023007	-	50	66.146	ENSXMAG00000000490	htatsf1	82	65.840	Xiphophorus_maculatus