EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000000720 (Gene tree)
Gene ID: 100032656
Gene Symbol: -
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 112574 bases
Position: chr1:393167166-393279739
Accession: 100032656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000000865	ResIII	PF04851.15	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000000883	-	10040	XM_007474325	ENSMODP00000000865	2419 (aa)	XP_007474387	F6W6G7

Gene Model

Click here to download ENSMODG00000000720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000000720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000000720	-	56	66.912	ENSMODG00000006219	CHD8	56	67.059
ENSMODG00000000720	-	71	69.055	ENSMODG00000013142	-	80	69.055
ENSMODG00000000720	-	81	70.067	ENSMODG00000008488	CHD7	67	69.613

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000000720	-	99	81.387	ENSG00000124177	CHD6	99	96.911	Homo_sapiens
ENSMODG00000000720	-	78	78.022	ENSAPOG00000013736	chd6	60	78.136	Acanthochromis_polyacanthus
ENSMODG00000000720	-	99	80.958	ENSAMEG00000009496	CHD6	89	80.958	Ailuropoda_melanoleuca
ENSMODG00000000720	-	78	78.120	ENSATEG00000005608	chd6	61	78.194	Anabas_testudineus
ENSMODG00000000720	-	94	83.521	ENSAPLG00000015592	CHD6	89	75.677	Anas_platyrhynchos
ENSMODG00000000720	-	99	70.977	ENSACAG00000006842	CHD6	89	70.738	Anolis_carolinensis
ENSMODG00000000720	-	99	80.933	ENSANAG00000037548	CHD6	99	91.743	Aotus_nancymaae
ENSMODG00000000720	-	79	77.222	ENSAMXG00000009576	chd6	68	77.436	Astyanax_mexicanus
ENSMODG00000000720	-	99	78.828	ENSBTAG00000005733	CHD6	89	78.910	Bos_taurus
ENSMODG00000000720	-	99	81.057	ENSCJAG00000017920	CHD6	99	91.560	Callithrix_jacchus
ENSMODG00000000720	-	99	81.000	ENSCAFG00000009236	CHD6	89	81.000	Canis_familiaris
ENSMODG00000000720	-	99	80.885	ENSCAFG00020012906	CHD6	95	94.402	Canis_lupus_dingo
ENSMODG00000000720	-	99	78.498	ENSCHIG00000017606	CHD6	89	78.539	Capra_hircus
ENSMODG00000000720	-	94	80.009	ENSTSYG00000014635	CHD6	100	80.009	Carlito_syrichta
ENSMODG00000000720	-	99	79.736	ENSCPOG00000015641	CHD6	89	79.695	Cavia_porcellus
ENSMODG00000000720	-	99	81.015	ENSCCAG00000036828	CHD6	99	91.743	Cebus_capucinus
ENSMODG00000000720	-	99	81.304	ENSCATG00000039248	CHD6	99	91.743	Cercocebus_atys
ENSMODG00000000720	-	99	80.222	ENSCLAG00000013743	CHD6	89	80.181	Chinchilla_lanigera
ENSMODG00000000720	-	99	81.345	ENSCSAG00000013997	CHD6	89	81.345	Chlorocebus_sabaeus
ENSMODG00000000720	-	89	90.386	ENSCHOG00000012647	CHD6	83	90.386	Choloepus_hoffmanni
ENSMODG00000000720	-	93	84.049	ENSCPBG00000019382	CHD6	89	77.228	Chrysemys_picta_bellii
ENSMODG00000000720	-	99	81.511	ENSCANG00000043435	CHD6	99	91.743	Colobus_angolensis_palliatus
ENSMODG00000000720	-	99	79.100	ENSCGRG00001002694	Chd6	89	79.017	Cricetulus_griseus_chok1gshd
ENSMODG00000000720	-	79	80.913	ENSDARG00000017244	chd6	70	80.857	Danio_rerio
ENSMODG00000000720	-	100	80.091	ENSDNOG00000004176	CHD6	89	80.091	Dasypus_novemcinctus
ENSMODG00000000720	-	99	80.554	ENSEASG00005023433	CHD6	95	96.139	Equus_asinus_asinus
ENSMODG00000000720	-	99	80.876	ENSECAG00000011761	CHD6	89	80.834	Equus_caballus
ENSMODG00000000720	-	80	80.908	ENSELUG00000012309	chd6	91	80.908	Esox_lucius
ENSMODG00000000720	-	99	80.834	ENSFCAG00000003572	CHD6	89	80.834	Felis_catus
ENSMODG00000000720	-	99	74.154	ENSFALG00000012563	CHD6	88	74.195	Ficedula_albicollis
ENSMODG00000000720	-	99	80.339	ENSFDAG00000013791	CHD6	89	80.339	Fukomys_damarensis
ENSMODG00000000720	-	74	73.719	ENSGMOG00000011715	chd6	76	73.719	Gadus_morhua
ENSMODG00000000720	-	78	75.282	ENSGACG00000000037	chd6	77	73.634	Gasterosteus_aculeatus
ENSMODG00000000720	-	99	81.345	ENSGGOG00000013123	CHD6	99	91.743	Gorilla_gorilla
ENSMODG00000000720	-	78	77.386	ENSHBUG00000014701	chd6	61	77.386	Haplochromis_burtoni
ENSMODG00000000720	-	99	80.223	ENSHGLG00000004548	CHD6	89	80.182	Heterocephalus_glaber_female
ENSMODG00000000720	-	99	80.223	ENSHGLG00100006401	CHD6	89	80.182	Heterocephalus_glaber_male
ENSMODG00000000720	-	81	79.188	ENSIPUG00000003692	chd6	69	79.188	Ictalurus_punctatus
ENSMODG00000000720	-	99	80.339	ENSSTOG00000013382	CHD6	89	80.165	Ictidomys_tridecemlineatus
ENSMODG00000000720	-	90	78.092	ENSLACG00000010881	CHD6	79	78.092	Latimeria_chalumnae
ENSMODG00000000720	-	76	82.327	ENSLOCG00000007386	chd6	73	82.638	Lepisosteus_oculatus
ENSMODG00000000720	-	99	81.462	ENSLAFG00000012144	CHD6	89	81.379	Loxodonta_africana
ENSMODG00000000720	-	99	81.511	ENSMFAG00000032830	CHD6	99	91.743	Macaca_fascicularis
ENSMODG00000000720	-	99	81.511	ENSMMUG00000020458	CHD6	99	91.743	Macaca_mulatta
ENSMODG00000000720	-	99	81.469	ENSMNEG00000040847	CHD6	99	91.743	Macaca_nemestrina
ENSMODG00000000720	-	99	81.593	ENSMLEG00000031965	CHD6	99	91.743	Mandrillus_leucophaeus
ENSMODG00000000720	-	78	77.438	ENSMAMG00000013111	chd6	61	77.859	Mastacembelus_armatus
ENSMODG00000000720	-	93	80.819	ENSMGAG00000001121	CHD6	89	75.276	Meleagris_gallopavo
ENSMODG00000000720	-	99	80.958	ENSMICG00000016641	CHD6	99	91.376	Microcebus_murinus
ENSMODG00000000720	-	99	78.356	MGP_CAROLIEiJ_G0024604	Chd6	75	95.918	Mus_caroli
ENSMODG00000000720	-	99	78.315	ENSMUSG00000057133	Chd6	75	95.805	Mus_musculus
ENSMODG00000000720	-	99	78.232	MGP_PahariEiJ_G0026048	Chd6	75	96.032	Mus_pahari
ENSMODG00000000720	-	99	78.232	MGP_SPRETEiJ_G0025526	Chd6	75	95.805	Mus_spretus
ENSMODG00000000720	-	99	79.810	ENSMPUG00000017695	CHD6	89	79.769	Mustela_putorius_furo
ENSMODG00000000720	-	99	80.544	ENSMLUG00000016247	CHD6	89	80.503	Myotis_lucifugus
ENSMODG00000000720	-	78	79.263	ENSNBRG00000013839	chd6	72	79.186	Neolamprologus_brichardi
ENSMODG00000000720	-	99	80.050	ENSNLEG00000006496	CHD6	89	79.926	Nomascus_leucogenys
ENSMODG00000000720	-	99	77.466	ENSOPRG00000013376	-	89	77.425	Ochotona_princeps
ENSMODG00000000720	-	84	79.241	ENSONIG00000000393	chd6	75	79.241	Oreochromis_niloticus
ENSMODG00000000720	-	100	72.590	ENSOANG00000014347	CHD6	88	72.612	Ornithorhynchus_anatinus
ENSMODG00000000720	-	99	78.539	ENSOCUG00000012394	CHD6	89	78.498	Oryctolagus_cuniculus
ENSMODG00000000720	-	79	76.087	ENSORLG00020021891	chd6	95	85.772	Oryzias_latipes_hni
ENSMODG00000000720	-	99	80.306	ENSOGAG00000002427	CHD6	89	80.223	Otolemur_garnettii
ENSMODG00000000720	-	99	76.599	ENSOARG00000002597	CHD6	89	76.641	Ovis_aries
ENSMODG00000000720	-	99	80.752	ENSPPRG00000014756	CHD6	89	80.752	Panthera_pardus
ENSMODG00000000720	-	99	80.669	ENSPTIG00000011094	CHD6	89	80.669	Panthera_tigris_altaica
ENSMODG00000000720	-	99	81.469	ENSPTRG00000013504	CHD6	99	91.743	Pan_troglodytes
ENSMODG00000000720	-	99	81.511	ENSPANG00000025554	CHD6	99	91.927	Papio_anubis
ENSMODG00000000720	-	78	82.936	ENSPKIG00000005578	chd6	71	82.045	Paramormyrops_kingsleyae
ENSMODG00000000720	-	80	78.171	ENSPMGG00000014877	chd6	81	78.171	Periophthalmus_magnuspinnatus
ENSMODG00000000720	-	100	95.165	ENSPCIG00000028037	CHD6	89	95.165	Phascolarctos_cinereus
ENSMODG00000000720	-	75	75.088	ENSPLAG00000003128	chd6	64	75.444	Poecilia_latipinna
ENSMODG00000000720	-	75	75.071	ENSPREG00000022653	chd6	99	86.081	Poecilia_reticulata
ENSMODG00000000720	-	99	81.271	ENSPPYG00000011016	CHD6	89	81.271	Pongo_abelii
ENSMODG00000000720	-	99	80.820	ENSPCOG00000001089	CHD6	99	91.560	Propithecus_coquereli
ENSMODG00000000720	-	79	79.277	ENSPNYG00000022516	chd6	72	79.277	Pundamilia_nyererei
ENSMODG00000000720	-	78	80.732	ENSPNAG00000012825	chd6	71	80.857	Pygocentrus_nattereri
ENSMODG00000000720	-	99	78.039	ENSRNOG00000016744	Chd6	89	77.915	Rattus_norvegicus
ENSMODG00000000720	-	99	81.057	ENSSBOG00000022089	CHD6	99	91.743	Saimiri_boliviensis_boliviensis
ENSMODG00000000720	-	100	94.559	ENSSHAG00000017072	CHD6	89	94.559	Sarcophilus_harrisii
ENSMODG00000000720	-	82	80.223	ENSSFOG00015012920	chd6	70	80.223	Scleropages_formosus
ENSMODG00000000720	-	58	98.684	ENSSARG00000002615	-	54	98.684	Sorex_araneus
ENSMODG00000000720	-	99	79.975	ENSSSCG00000007360	CHD6	90	79.934	Sus_scrofa
ENSMODG00000000720	-	93	82.803	ENSTGUG00000003179	CHD6	86	82.750	Taeniopygia_guttata
ENSMODG00000000720	-	80	77.711	ENSTNIG00000017487	chd6	80	75.731	Tetraodon_nigroviridis
ENSMODG00000000720	-	99	77.288	ENSTTRG00000013438	CHD6	89	77.246	Tursiops_truncatus
ENSMODG00000000720	-	99	79.562	ENSUAMG00000024036	CHD6	95	94.402	Ursus_americanus
ENSMODG00000000720	-	99	80.958	ENSUMAG00000002017	CHD6	95	94.402	Ursus_maritimus
ENSMODG00000000720	-	93	86.580	ENSVPAG00000007941	CHD6	84	86.580	Vicugna_pacos
ENSMODG00000000720	-	99	81.124	ENSVVUG00000029164	CHD6	89	81.124	Vulpes_vulpes
ENSMODG00000000720	-	89	73.605	ENSXETG00000021445	chd6	78	73.519	Xenopus_tropicalis