EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000000923 (Gene tree)
Gene ID: 100012237
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 203028 bases
Position: chr4:132536288-132739315
Accession: 9757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000001101	R3H	PF01424.22	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000001123	R3HDM1-201	3756	-	ENSMODP00000001101	1071 (aa)	-	F7F853

Gene Model

Click here to download ENSMODG00000000923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000000923's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000000923	R3HDM1	73	48.589	ENSMODG00000002309	ARPP21	91	48.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000000923	R3HDM1	97	77.852	ENSG00000048991	R3HDM1	99	82.792	Homo_sapiens
ENSMODG00000000923	R3HDM1	96	47.799	ENSAPOG00000020850	r3hdm1	97	47.653	Acanthochromis_polyacanthus
ENSMODG00000000923	R3HDM1	97	78.632	ENSAMEG00000014886	R3HDM1	90	78.727	Ailuropoda_melanoleuca
ENSMODG00000000923	R3HDM1	96	47.435	ENSAOCG00000005192	r3hdm1	99	47.330	Amphiprion_ocellaris
ENSMODG00000000923	R3HDM1	96	45.185	ENSAPEG00000016108	r3hdm1	99	45.126	Amphiprion_percula
ENSMODG00000000923	R3HDM1	96	44.192	ENSATEG00000000232	r3hdm1	99	44.596	Anabas_testudineus
ENSMODG00000000923	R3HDM1	97	77.329	ENSAPLG00000015231	R3HDM1	90	77.137	Anas_platyrhynchos
ENSMODG00000000923	R3HDM1	97	78.626	ENSACAG00000001676	R3HDM1	90	79.008	Anolis_carolinensis
ENSMODG00000000923	R3HDM1	97	77.968	ENSANAG00000035334	R3HDM1	90	77.873	Aotus_nancymaae
ENSMODG00000000923	R3HDM1	86	46.247	ENSACLG00000027282	r3hdm1	94	46.341	Astatotilapia_calliptera
ENSMODG00000000923	R3HDM1	90	69.248	ENSAMXG00000012861	R3HDM1	91	62.165	Astyanax_mexicanus
ENSMODG00000000923	R3HDM1	90	60.222	ENSAMXG00000003536	r3hdm1	90	61.048	Astyanax_mexicanus
ENSMODG00000000923	R3HDM1	56	58.537	ENSAMXG00000020587	arpp21	88	36.808	Astyanax_mexicanus
ENSMODG00000000923	R3HDM1	97	80.630	ENSBTAG00000013302	R3HDM1	90	80.916	Bos_taurus
ENSMODG00000000923	R3HDM1	97	78.021	ENSCJAG00000011718	R3HDM1	90	77.926	Callithrix_jacchus
ENSMODG00000000923	R3HDM1	97	78.992	ENSCAFG00000005075	R3HDM1	90	79.012	Canis_familiaris
ENSMODG00000000923	R3HDM1	97	81.766	ENSCAFG00020016119	R3HDM1	99	84.477	Canis_lupus_dingo
ENSMODG00000000923	R3HDM1	97	81.071	ENSCHIG00000020851	R3HDM1	90	81.071	Capra_hircus
ENSMODG00000000923	R3HDM1	97	78.748	ENSCPOG00000012784	R3HDM1	100	80.064	Cavia_porcellus
ENSMODG00000000923	R3HDM1	97	77.471	ENSCCAG00000027199	R3HDM1	90	77.376	Cebus_capucinus
ENSMODG00000000923	R3HDM1	97	80.418	ENSCATG00000023642	R3HDM1	90	80.228	Cercocebus_atys
ENSMODG00000000923	R3HDM1	97	77.915	ENSCLAG00000007962	R3HDM1	100	82.051	Chinchilla_lanigera
ENSMODG00000000923	R3HDM1	97	80.608	ENSCSAG00000016356	R3HDM1	90	80.418	Chlorocebus_sabaeus
ENSMODG00000000923	R3HDM1	84	63.964	ENSCHOG00000013638	R3HDM1	80	63.814	Choloepus_hoffmanni
ENSMODG00000000923	R3HDM1	89	79.075	ENSCPBG00000009645	R3HDM1	87	88.968	Chrysemys_picta_bellii
ENSMODG00000000923	R3HDM1	97	77.588	ENSCANG00000034748	R3HDM1	89	78.469	Colobus_angolensis_palliatus
ENSMODG00000000923	R3HDM1	97	78.727	ENSCGRG00001012357	R3hdm1	87	78.632	Cricetulus_griseus_chok1gshd
ENSMODG00000000923	R3HDM1	97	78.727	ENSCGRG00000012080	R3hdm1	100	81.090	Cricetulus_griseus_crigri
ENSMODG00000000923	R3HDM1	90	43.264	ENSCSEG00000008944	r3hdm1	94	43.762	Cynoglossus_semilaevis
ENSMODG00000000923	R3HDM1	96	45.980	ENSCVAG00000007582	r3hdm1	99	46.196	Cyprinodon_variegatus
ENSMODG00000000923	R3HDM1	53	38.715	ENSDARG00000061081	arpp21	62	37.660	Danio_rerio
ENSMODG00000000923	R3HDM1	97	75.143	ENSDNOG00000000771	R3HDM1	90	75.239	Dasypus_novemcinctus
ENSMODG00000000923	R3HDM1	92	73.285	ENSETEG00000013606	R3HDM1	86	72.555	Echinops_telfairi
ENSMODG00000000923	R3HDM1	97	82.459	ENSEASG00005007392	R3HDM1	89	87.799	Equus_asinus_asinus
ENSMODG00000000923	R3HDM1	97	82.190	ENSECAG00000019114	R3HDM1	89	87.799	Equus_caballus
ENSMODG00000000923	R3HDM1	79	78.481	ENSEEUG00000012589	R3HDM1	74	79.317	Erinaceus_europaeus
ENSMODG00000000923	R3HDM1	95	58.845	ENSELUG00000004909	R3HDM1	92	59.033	Esox_lucius
ENSMODG00000000923	R3HDM1	82	48.763	ENSELUG00000014413	r3hdm1	83	52.816	Esox_lucius
ENSMODG00000000923	R3HDM1	97	81.697	ENSFCAG00000027113	R3HDM1	89	88.517	Felis_catus
ENSMODG00000000923	R3HDM1	81	75.487	ENSFALG00000013731	R3HDM1	91	70.690	Ficedula_albicollis
ENSMODG00000000923	R3HDM1	97	78.653	ENSFDAG00000016478	R3HDM1	99	85.714	Fukomys_damarensis
ENSMODG00000000923	R3HDM1	96	46.600	ENSFHEG00000018713	r3hdm1	100	46.538	Fundulus_heteroclitus
ENSMODG00000000923	R3HDM1	60	65.644	ENSGMOG00000006042	-	73	69.197	Gadus_morhua
ENSMODG00000000923	R3HDM1	80	82.222	ENSGALG00000012246	R3HDM1	87	82.222	Gallus_gallus
ENSMODG00000000923	R3HDM1	86	45.998	ENSGAFG00000006203	r3hdm1	94	46.374	Gambusia_affinis
ENSMODG00000000923	R3HDM1	90	48.259	ENSGACG00000014925	r3hdm1	96	48.120	Gasterosteus_aculeatus
ENSMODG00000000923	R3HDM1	97	79.655	ENSGAGG00000007840	R3HDM1	90	78.887	Gopherus_agassizii
ENSMODG00000000923	R3HDM1	97	77.662	ENSGGOG00000008156	R3HDM1	100	76.031	Gorilla_gorilla
ENSMODG00000000923	R3HDM1	97	78.782	ENSHGLG00000015718	R3HDM1	99	85.353	Heterocephalus_glaber_female
ENSMODG00000000923	R3HDM1	96	60.097	ENSHGLG00100015374	-	91	60.097	Heterocephalus_glaber_male
ENSMODG00000000923	R3HDM1	97	78.592	ENSHGLG00100003184	-	100	81.090	Heterocephalus_glaber_male
ENSMODG00000000923	R3HDM1	86	43.679	ENSHCOG00000013366	r3hdm1	88	57.946	Hippocampus_comes
ENSMODG00000000923	R3HDM1	64	40.688	ENSIPUG00000020552	arpp21	84	43.810	Ictalurus_punctatus
ENSMODG00000000923	R3HDM1	88	65.116	ENSIPUG00000001676	R3HDM1	99	65.116	Ictalurus_punctatus
ENSMODG00000000923	R3HDM1	81	67.066	ENSIPUG00000013629	r3hdm1	84	68.421	Ictalurus_punctatus
ENSMODG00000000923	R3HDM1	97	80.133	ENSSTOG00000007572	R3HDM1	99	86.799	Ictidomys_tridecemlineatus
ENSMODG00000000923	R3HDM1	92	74.850	ENSLACG00000005334	R3HDM1	90	76.887	Latimeria_chalumnae
ENSMODG00000000923	R3HDM1	97	66.446	ENSLOCG00000001641	r3hdm1	91	65.974	Lepisosteus_oculatus
ENSMODG00000000923	R3HDM1	97	81.179	ENSLAFG00000009065	R3HDM1	90	81.179	Loxodonta_africana
ENSMODG00000000923	R3HDM1	90	86.651	ENSMFAG00000030331	R3HDM1	89	87.799	Macaca_fascicularis
ENSMODG00000000923	R3HDM1	97	77.471	ENSMMUG00000009844	R3HDM1	89	78.469	Macaca_mulatta
ENSMODG00000000923	R3HDM1	90	86.651	ENSMNEG00000027793	R3HDM1	89	87.799	Macaca_nemestrina
ENSMODG00000000923	R3HDM1	97	77.757	ENSMLEG00000043189	R3HDM1	90	77.567	Mandrillus_leucophaeus
ENSMODG00000000923	R3HDM1	96	46.320	ENSMAMG00000004532	r3hdm1	99	46.649	Mastacembelus_armatus
ENSMODG00000000923	R3HDM1	96	46.480	ENSMZEG00005003157	r3hdm1	99	46.691	Maylandia_zebra
ENSMODG00000000923	R3HDM1	97	75.985	ENSMGAG00000012461	R3HDM1	89	75.793	Meleagris_gallopavo
ENSMODG00000000923	R3HDM1	97	78.693	ENSMAUG00000010315	R3hdm1	100	81.410	Mesocricetus_auratus
ENSMODG00000000923	R3HDM1	90	76.581	ENSMICG00000042655	-	93	77.512	Microcebus_murinus
ENSMODG00000000923	R3HDM1	97	76.565	ENSMICG00000005900	-	90	76.777	Microcebus_murinus
ENSMODG00000000923	R3HDM1	52	84.448	ENSMOCG00000019833	-	100	81.090	Microtus_ochrogaster
ENSMODG00000000923	R3HDM1	96	46.293	ENSMALG00000009000	r3hdm1	91	46.147	Monopterus_albus
ENSMODG00000000923	R3HDM1	97	78.592	MGP_CAROLIEiJ_G0014543	R3hdm1	100	81.731	Mus_caroli
ENSMODG00000000923	R3HDM1	97	78.021	ENSMUSG00000056211	R3hdm1	100	81.731	Mus_musculus
ENSMODG00000000923	R3HDM1	97	77.831	MGP_PahariEiJ_G0027779	R3hdm1	100	81.410	Mus_pahari
ENSMODG00000000923	R3HDM1	97	78.211	MGP_SPRETEiJ_G0015350	R3hdm1	100	81.731	Mus_spretus
ENSMODG00000000923	R3HDM1	96	79.023	ENSMPUG00000002412	R3HDM1	89	79.119	Mustela_putorius_furo
ENSMODG00000000923	R3HDM1	97	77.652	ENSMLUG00000013824	R3HDM1	90	77.462	Myotis_lucifugus
ENSMODG00000000923	R3HDM1	97	77.662	ENSNLEG00000008622	R3HDM1	90	77.471	Nomascus_leucogenys
ENSMODG00000000923	R3HDM1	90	95.142	ENSMEUG00000011784	R3HDM1	95	95.142	Notamacropus_eugenii
ENSMODG00000000923	R3HDM1	97	77.852	ENSODEG00000008607	R3HDM1	100	82.692	Octodon_degus
ENSMODG00000000923	R3HDM1	92	45.996	ENSONIG00000012017	r3hdm1	91	45.956	Oreochromis_niloticus
ENSMODG00000000923	R3HDM1	97	79.274	ENSOANG00000007987	R3HDM1	90	79.465	Ornithorhynchus_anatinus
ENSMODG00000000923	R3HDM1	96	77.533	ENSOCUG00000017366	R3HDM1	98	77.533	Oryctolagus_cuniculus
ENSMODG00000000923	R3HDM1	96	44.312	ENSORLG00000004297	r3hdm1	99	44.771	Oryzias_latipes
ENSMODG00000000923	R3HDM1	96	44.872	ENSORLG00015017355	r3hdm1	99	45.055	Oryzias_latipes_hsok
ENSMODG00000000923	R3HDM1	97	77.598	ENSOGAG00000003136	R3HDM1	90	77.831	Otolemur_garnettii
ENSMODG00000000923	R3HDM1	97	78.278	ENSOARG00000010788	R3HDM1	90	78.278	Ovis_aries
ENSMODG00000000923	R3HDM1	97	77.704	ENSPPAG00000027858	R3HDM1	90	77.514	Pan_paniscus
ENSMODG00000000923	R3HDM1	97	78.551	ENSPPRG00000002626	R3HDM1	90	78.646	Panthera_pardus
ENSMODG00000000923	R3HDM1	97	78.646	ENSPTIG00000016581	R3HDM1	90	78.742	Panthera_tigris_altaica
ENSMODG00000000923	R3HDM1	97	77.609	ENSPTRG00000012494	R3HDM1	89	78.469	Pan_troglodytes
ENSMODG00000000923	R3HDM1	97	77.757	ENSPANG00000026448	R3HDM1	90	77.567	Papio_anubis
ENSMODG00000000923	R3HDM1	96	58.784	ENSPKIG00000004328	r3hdm1	80	73.684	Paramormyrops_kingsleyae
ENSMODG00000000923	R3HDM1	97	76.031	ENSPSIG00000012915	R3HDM1	90	76.702	Pelodiscus_sinensis
ENSMODG00000000923	R3HDM1	97	78.497	ENSPEMG00000015187	R3hdm1	100	81.090	Peromyscus_maniculatus_bairdii
ENSMODG00000000923	R3HDM1	91	42.898	ENSPMAG00000003369	-	94	44.103	Petromyzon_marinus
ENSMODG00000000923	R3HDM1	97	93.750	ENSPCIG00000002491	R3HDM1	89	95.204	Phascolarctos_cinereus
ENSMODG00000000923	R3HDM1	96	46.661	ENSPFOG00000015036	r3hdm1	99	46.799	Poecilia_formosa
ENSMODG00000000923	R3HDM1	85	45.850	ENSPLAG00000018042	r3hdm1	94	45.951	Poecilia_latipinna
ENSMODG00000000923	R3HDM1	85	46.264	ENSPMEG00000023947	r3hdm1	94	46.366	Poecilia_mexicana
ENSMODG00000000923	R3HDM1	96	47.016	ENSPREG00000007902	r3hdm1	88	59.545	Poecilia_reticulata
ENSMODG00000000923	R3HDM1	97	76.543	ENSPPYG00000012815	R3HDM1	90	76.353	Pongo_abelii
ENSMODG00000000923	R3HDM1	91	75.781	ENSPCAG00000006208	R3HDM1	85	76.953	Procavia_capensis
ENSMODG00000000923	R3HDM1	97	74.786	ENSPCOG00000012698	R3HDM1	90	75.071	Propithecus_coquereli
ENSMODG00000000923	R3HDM1	97	67.537	ENSPVAG00000006098	R3HDM1	86	74.532	Pteropus_vampyrus
ENSMODG00000000923	R3HDM1	57	40.446	ENSPNAG00000004162	arpp21	65	42.193	Pygocentrus_nattereri
ENSMODG00000000923	R3HDM1	80	72.892	ENSPNAG00000005436	R3HDM1	88	74.455	Pygocentrus_nattereri
ENSMODG00000000923	R3HDM1	93	54.938	ENSPNAG00000013952	r3hdm1	90	61.416	Pygocentrus_nattereri
ENSMODG00000000923	R3HDM1	97	77.165	ENSRNOG00000004099	R3hdm1	90	77.069	Rattus_norvegicus
ENSMODG00000000923	R3HDM1	77	89.655	ENSRBIG00000033317	R3HDM1	87	91.459	Rhinopithecus_bieti
ENSMODG00000000923	R3HDM1	90	77.752	ENSRROG00000034534	R3HDM1	89	78.708	Rhinopithecus_roxellana
ENSMODG00000000923	R3HDM1	97	78.137	ENSSBOG00000020389	R3HDM1	90	78.042	Saimiri_boliviensis_boliviensis
ENSMODG00000000923	R3HDM1	97	90.848	ENSSHAG00000016999	R3HDM1	90	90.848	Sarcophilus_harrisii
ENSMODG00000000923	R3HDM1	97	62.027	ENSSFOG00015014134	r3hdm1	90	62.121	Scleropages_formosus
ENSMODG00000000923	R3HDM1	97	57.909	ENSSFOG00015019851	-	96	57.802	Scleropages_formosus
ENSMODG00000000923	R3HDM1	97	43.505	ENSSMAG00000001669	r3hdm1	91	43.316	Scophthalmus_maximus
ENSMODG00000000923	R3HDM1	94	43.727	ENSSDUG00000010749	r3hdm1	99	44.215	Seriola_dumerili
ENSMODG00000000923	R3HDM1	98	44.464	ENSSLDG00000004499	r3hdm1	93	44.670	Seriola_lalandi_dorsalis
ENSMODG00000000923	R3HDM1	57	74.679	ENSSARG00000000352	-	53	74.679	Sorex_araneus
ENSMODG00000000923	R3HDM1	97	78.428	ENSSPUG00000004167	R3HDM1	90	78.428	Sphenodon_punctatus
ENSMODG00000000923	R3HDM1	96	45.725	ENSSPAG00000004648	r3hdm1	99	46.147	Stegastes_partitus
ENSMODG00000000923	R3HDM1	97	81.333	ENSSSCG00000015692	R3HDM1	90	81.333	Sus_scrofa
ENSMODG00000000923	R3HDM1	97	72.771	ENSTGUG00000011750	R3HDM1	90	72.649	Taeniopygia_guttata
ENSMODG00000000923	R3HDM1	85	45.683	ENSTRUG00000011654	r3hdm1	93	45.683	Takifugu_rubripes
ENSMODG00000000923	R3HDM1	90	44.478	ENSTNIG00000010362	r3hdm1	95	44.221	Tetraodon_nigroviridis
ENSMODG00000000923	R3HDM1	97	72.658	ENSTTRG00000003935	R3HDM1	90	72.658	Tursiops_truncatus
ENSMODG00000000923	R3HDM1	77	78.802	ENSUAMG00000024806	R3HDM1	99	85.895	Ursus_americanus
ENSMODG00000000923	R3HDM1	97	73.549	ENSUMAG00000005552	R3HDM1	88	78.708	Ursus_maritimus
ENSMODG00000000923	R3HDM1	86	75.744	ENSVPAG00000007333	R3HDM1	79	75.973	Vicugna_pacos
ENSMODG00000000923	R3HDM1	97	81.844	ENSVVUG00000006457	R3HDM1	90	81.939	Vulpes_vulpes
ENSMODG00000000923	R3HDM1	96	65.514	ENSXETG00000019330	r3hdm1	99	64.340	Xenopus_tropicalis
ENSMODG00000000923	R3HDM1	73	46.675	ENSXCOG00000017448	r3hdm1	94	47.279	Xiphophorus_couchianus
ENSMODG00000000923	R3HDM1	96	46.903	ENSXMAG00000007885	r3hdm1	99	46.661	Xiphophorus_maculatus