EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000001177 (Gene tree)
Gene ID: 100015847
Gene Symbol: BMS1
Alias: BMS1L|KIAA0187
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 44906 bases
Position: chr1:58295243-58340148
Accession: 100015847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000001410	AARP2CN	PF08142.12	1.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000001438	BMS1-201	4972	-	ENSMODP00000001410	1308 (aa)	XP_007478543	F7GHE4

Gene Model

Click here to download ENSMODG00000001177's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000001177's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000001177	BMS1	99	78.588	ENSG00000165733	BMS1	99	77.957	Homo_sapiens
ENSMODG00000001177	BMS1	69	71.724	ENSAPOG00000002296	bms1	99	59.075	Acanthochromis_polyacanthus
ENSMODG00000001177	BMS1	99	79.141	ENSAMEG00000016834	BMS1	99	78.725	Ailuropoda_melanoleuca
ENSMODG00000001177	BMS1	77	80.978	ENSACIG00000002588	bms1	92	78.304	Amphilophus_citrinellus
ENSMODG00000001177	BMS1	83	69.915	ENSAOCG00000018088	bms1	99	61.183	Amphiprion_ocellaris
ENSMODG00000001177	BMS1	81	71.685	ENSAPEG00000014673	bms1	99	61.002	Amphiprion_percula
ENSMODG00000001177	BMS1	88	68.910	ENSATEG00000023465	bms1	99	64.621	Anabas_testudineus
ENSMODG00000001177	BMS1	95	73.651	ENSAPLG00000003759	BMS1	100	74.343	Anas_platyrhynchos
ENSMODG00000001177	BMS1	99	73.186	ENSACAG00000004537	-	99	73.435	Anolis_carolinensis
ENSMODG00000001177	BMS1	99	77.820	ENSANAG00000023432	BMS1	99	77.266	Aotus_nancymaae
ENSMODG00000001177	BMS1	86	70.096	ENSACLG00000001294	bms1	99	62.243	Astatotilapia_calliptera
ENSMODG00000001177	BMS1	99	79.048	ENSBTAG00000012878	BMS1	99	78.610	Bos_taurus
ENSMODG00000001177	BMS1	79	52.206	WBGene00022021	Y61A9LA.10	99	52.206	Caenorhabditis_elegans
ENSMODG00000001177	BMS1	99	78.358	ENSCJAG00000021705	BMS1	99	77.667	Callithrix_jacchus
ENSMODG00000001177	BMS1	99	79.847	ENSCAFG00000007114	BMS1	99	78.802	Canis_familiaris
ENSMODG00000001177	BMS1	99	79.847	ENSCAFG00020025282	BMS1	99	78.802	Canis_lupus_dingo
ENSMODG00000001177	BMS1	99	79.355	ENSCHIG00000023251	BMS1	99	78.762	Capra_hircus
ENSMODG00000001177	BMS1	99	72.706	ENSCAPG00000008652	BMS1	100	71.875	Cavia_aperea
ENSMODG00000001177	BMS1	99	76.223	ENSCPOG00000000502	BMS1	100	75.612	Cavia_porcellus
ENSMODG00000001177	BMS1	99	64.801	ENSCCAG00000024969	-	99	63.420	Cebus_capucinus
ENSMODG00000001177	BMS1	90	58.568	ENSCATG00000008695	-	97	58.582	Cercocebus_atys
ENSMODG00000001177	BMS1	99	78.741	ENSCATG00000030625	-	98	79.695	Cercocebus_atys
ENSMODG00000001177	BMS1	99	77.412	ENSCLAG00000002446	BMS1	100	76.448	Chinchilla_lanigera
ENSMODG00000001177	BMS1	99	78.665	ENSCSAG00000011118	BMS1	99	78.264	Chlorocebus_sabaeus
ENSMODG00000001177	BMS1	99	77.769	ENSCHOG00000011055	BMS1	99	77.402	Choloepus_hoffmanni
ENSMODG00000001177	BMS1	99	77.011	ENSCPBG00000025581	BMS1	99	75.760	Chrysemys_picta_bellii
ENSMODG00000001177	BMS1	77	59.854	ENSCING00000003181	-	96	59.854	Ciona_intestinalis
ENSMODG00000001177	BMS1	66	55.181	ENSCSAVG00000004113	-	84	58.757	Ciona_savignyi
ENSMODG00000001177	BMS1	99	79.432	ENSCANG00000011609	BMS1	99	78.187	Colobus_angolensis_palliatus
ENSMODG00000001177	BMS1	99	77.220	ENSCGRG00001019461	Bms1	100	76.376	Cricetulus_griseus_chok1gshd
ENSMODG00000001177	BMS1	99	77.220	ENSCGRG00000009016	Bms1	99	76.376	Cricetulus_griseus_crigri
ENSMODG00000001177	BMS1	80	74.941	ENSCSEG00000002469	bms1	99	61.308	Cynoglossus_semilaevis
ENSMODG00000001177	BMS1	79	76.812	ENSCVAG00000008371	bms1	99	62.672	Cyprinodon_variegatus
ENSMODG00000001177	BMS1	81	73.455	ENSDARG00000054154	bms1	99	60.290	Danio_rerio
ENSMODG00000001177	BMS1	99	79.234	ENSDNOG00000015761	BMS1	99	78.298	Dasypus_novemcinctus
ENSMODG00000001177	BMS1	99	78.154	ENSDORG00000002982	Bms1	99	77.940	Dipodomys_ordii
ENSMODG00000001177	BMS1	75	60.811	FBgn0036686	CG7728	91	58.435	Drosophila_melanogaster
ENSMODG00000001177	BMS1	85	78.571	ENSETEG00000009554	BMS1	91	78.571	Echinops_telfairi
ENSMODG00000001177	BMS1	99	79.400	ENSEASG00005006894	BMS1	99	78.818	Equus_asinus_asinus
ENSMODG00000001177	BMS1	99	79.400	ENSECAG00000001358	BMS1	99	78.665	Equus_caballus
ENSMODG00000001177	BMS1	82	74.324	ENSELUG00000001756	bms1	95	67.722	Esox_lucius
ENSMODG00000001177	BMS1	99	79.265	ENSFCAG00000011220	BMS1	99	78.746	Felis_catus
ENSMODG00000001177	BMS1	99	72.318	ENSFALG00000006882	BMS1	99	73.900	Ficedula_albicollis
ENSMODG00000001177	BMS1	99	76.282	ENSFDAG00000001422	BMS1	100	75.345	Fukomys_damarensis
ENSMODG00000001177	BMS1	85	69.293	ENSFHEG00000003367	bms1	99	66.978	Fundulus_heteroclitus
ENSMODG00000001177	BMS1	99	62.523	ENSGMOG00000000718	bms1	99	75.430	Gadus_morhua
ENSMODG00000001177	BMS1	62	69.277	ENSGALG00000002624	BMS1	100	74.487	Gallus_gallus
ENSMODG00000001177	BMS1	99	59.490	ENSGACG00000015334	bms1	89	64.976	Gasterosteus_aculeatus
ENSMODG00000001177	BMS1	99	75.346	ENSGAGG00000003467	BMS1	99	74.924	Gopherus_agassizii
ENSMODG00000001177	BMS1	86	70.096	ENSHBUG00000022628	bms1	99	61.937	Haplochromis_burtoni
ENSMODG00000001177	BMS1	99	75.785	ENSHGLG00000000477	BMS1	100	74.581	Heterocephalus_glaber_female
ENSMODG00000001177	BMS1	99	75.862	ENSHGLG00100002176	BMS1	100	74.658	Heterocephalus_glaber_male
ENSMODG00000001177	BMS1	89	67.200	ENSHCOG00000017604	bms1	99	65.492	Hippocampus_comes
ENSMODG00000001177	BMS1	96	73.303	ENSIPUG00000017855	bms1	93	73.303	Ictalurus_punctatus
ENSMODG00000001177	BMS1	99	78.374	ENSSTOG00000015063	BMS1	99	77.693	Ictidomys_tridecemlineatus
ENSMODG00000001177	BMS1	99	76.610	ENSJJAG00000017328	Bms1	100	76.994	Jaculus_jaculus
ENSMODG00000001177	BMS1	57	66.852	ENSKMAG00000021982	bms1	91	65.989	Kryptolebias_marmoratus
ENSMODG00000001177	BMS1	81	72.018	ENSLBEG00000028208	bms1	99	61.009	Labrus_bergylta
ENSMODG00000001177	BMS1	99	63.011	ENSLACG00000001600	BMS1	100	63.636	Latimeria_chalumnae
ENSMODG00000001177	BMS1	82	75.917	ENSLOCG00000012914	bms1	99	63.899	Lepisosteus_oculatus
ENSMODG00000001177	BMS1	99	77.283	ENSLAFG00000006250	BMS1	99	76.970	Loxodonta_africana
ENSMODG00000001177	BMS1	81	83.588	ENSMFAG00000037771	BMS1	98	83.769	Macaca_fascicularis
ENSMODG00000001177	BMS1	90	66.328	ENSMMUG00000007426	-	99	66.414	Macaca_mulatta
ENSMODG00000001177	BMS1	85	61.171	ENSMLEG00000029084	-	97	61.407	Mandrillus_leucophaeus
ENSMODG00000001177	BMS1	99	59.785	ENSMAMG00000020855	bms1	97	67.040	Mastacembelus_armatus
ENSMODG00000001177	BMS1	86	70.096	ENSMZEG00005005663	bms1	99	62.166	Maylandia_zebra
ENSMODG00000001177	BMS1	95	72.620	ENSMGAG00000001170	BMS1	100	73.217	Meleagris_gallopavo
ENSMODG00000001177	BMS1	99	77.606	ENSMAUG00000002195	Bms1	100	76.560	Mesocricetus_auratus
ENSMODG00000001177	BMS1	99	78.604	ENSMICG00000009977	BMS1	99	77.701	Microcebus_murinus
ENSMODG00000001177	BMS1	99	76.721	ENSMOCG00000002038	Bms1	99	76.110	Microtus_ochrogaster
ENSMODG00000001177	BMS1	85	68.058	ENSMMOG00000000977	bms1	96	66.934	Mola_mola
ENSMODG00000001177	BMS1	93	65.315	ENSMALG00000009680	bms1	99	64.440	Monopterus_albus
ENSMODG00000001177	BMS1	69	90.557	MGP_CAROLIEiJ_G0028785	-	85	90.557	Mus_caroli
ENSMODG00000001177	BMS1	99	76.710	ENSMUSG00000030138	Bms1	99	76.592	Mus_musculus
ENSMODG00000001177	BMS1	99	76.336	MGP_PahariEiJ_G0022539	Bms1	99	76.480	Mus_pahari
ENSMODG00000001177	BMS1	99	76.201	MGP_SPRETEiJ_G0029816	Bms1	99	76.439	Mus_spretus
ENSMODG00000001177	BMS1	99	80.000	ENSMPUG00000017276	BMS1	99	79.538	Mustela_putorius_furo
ENSMODG00000001177	BMS1	99	78.418	ENSMLUG00000003260	BMS1	99	77.489	Myotis_lucifugus
ENSMODG00000001177	BMS1	96	70.803	ENSNGAG00000015258	Bms1	99	72.397	Nannospalax_galili
ENSMODG00000001177	BMS1	99	77.283	ENSNLEG00000015791	BMS1	99	76.805	Nomascus_leucogenys
ENSMODG00000001177	BMS1	80	90.024	ENSOPRG00000005195	BMS1	81	90.024	Ochotona_princeps
ENSMODG00000001177	BMS1	99	76.493	ENSODEG00000005554	BMS1	100	76.475	Octodon_degus
ENSMODG00000001177	BMS1	89	70.144	ENSONIG00000007227	bms1	99	66.425	Oreochromis_niloticus
ENSMODG00000001177	BMS1	99	78.451	ENSOANG00000000662	-	99	78.972	Ornithorhynchus_anatinus
ENSMODG00000001177	BMS1	99	77.871	ENSOCUG00000005354	BMS1	99	77.531	Oryctolagus_cuniculus
ENSMODG00000001177	BMS1	81	74.215	ENSORLG00000014655	bms1	99	63.914	Oryzias_latipes
ENSMODG00000001177	BMS1	81	73.923	ENSORLG00020016246	bms1	99	63.964	Oryzias_latipes_hni
ENSMODG00000001177	BMS1	81	73.874	ENSORLG00015014183	bms1	99	64.505	Oryzias_latipes_hsok
ENSMODG00000001177	BMS1	87	70.048	ENSOMEG00000015042	bms1	99	62.357	Oryzias_melastigma
ENSMODG00000001177	BMS1	99	79.036	ENSOGAG00000006511	BMS1	99	78.294	Otolemur_garnettii
ENSMODG00000001177	BMS1	99	79.036	ENSOARG00000003900	BMS1	99	78.522	Ovis_aries
ENSMODG00000001177	BMS1	99	75.153	ENSPPAG00000027837	BMS1	99	74.827	Pan_paniscus
ENSMODG00000001177	BMS1	99	79.511	ENSPPRG00000001311	BMS1	99	78.670	Panthera_pardus
ENSMODG00000001177	BMS1	99	77.735	ENSPTIG00000009652	BMS1	99	77.370	Panthera_tigris_altaica
ENSMODG00000001177	BMS1	99	78.511	ENSPTRG00000002441	BMS1	99	78.127	Pan_troglodytes
ENSMODG00000001177	BMS1	99	75.477	ENSPSIG00000006481	BMS1	99	75.267	Pelodiscus_sinensis
ENSMODG00000001177	BMS1	98	69.899	ENSPEMG00000022467	Bms1	100	68.902	Peromyscus_maniculatus_bairdii
ENSMODG00000001177	BMS1	95	97.987	ENSPCIG00000001339	BMS1	99	95.592	Phascolarctos_cinereus
ENSMODG00000001177	BMS1	78	74.939	ENSPFOG00000015180	bms1	99	61.752	Poecilia_formosa
ENSMODG00000001177	BMS1	78	75.184	ENSPMEG00000023176	bms1	94	65.291	Poecilia_mexicana
ENSMODG00000001177	BMS1	78	74.510	ENSPREG00000002695	bms1	95	67.360	Poecilia_reticulata
ENSMODG00000001177	BMS1	61	75.094	ENSPPYG00000002836	-	99	75.189	Pongo_abelii
ENSMODG00000001177	BMS1	73	91.156	ENSPCAG00000014528	BMS1	73	91.156	Procavia_capensis
ENSMODG00000001177	BMS1	95	75.240	ENSPCOG00000023834	-	99	75.080	Propithecus_coquereli
ENSMODG00000001177	BMS1	99	75.385	ENSPVAG00000000725	BMS1	99	74.865	Pteropus_vampyrus
ENSMODG00000001177	BMS1	86	70.192	ENSPNYG00000018866	bms1	99	61.345	Pundamilia_nyererei
ENSMODG00000001177	BMS1	82	76.757	ENSRNOG00000006576	Bms1	100	76.873	Rattus_norvegicus
ENSMODG00000001177	BMS1	99	77.053	ENSRROG00000040101	BMS1	99	77.400	Rhinopithecus_roxellana
ENSMODG00000001177	BMS1	73	47.137	YPL217C	-	74	50.580	Saccharomyces_cerevisiae
ENSMODG00000001177	BMS1	99	78.818	ENSSBOG00000035778	BMS1	99	78.111	Saimiri_boliviensis_boliviensis
ENSMODG00000001177	BMS1	99	90.502	ENSSHAG00000005062	BMS1	99	89.810	Sarcophilus_harrisii
ENSMODG00000001177	BMS1	91	69.749	ENSSFOG00015022313	bms1	99	62.980	Scleropages_formosus
ENSMODG00000001177	BMS1	81	72.998	ENSSMAG00000019966	bms1	99	61.789	Scophthalmus_maximus
ENSMODG00000001177	BMS1	87	69.502	ENSSDUG00000016875	bms1	87	66.182	Seriola_dumerili
ENSMODG00000001177	BMS1	87	69.823	ENSSLDG00000015199	bms1	54	62.341	Seriola_lalandi_dorsalis
ENSMODG00000001177	BMS1	70	66.812	ENSSARG00000014407	BMS1	100	67.573	Sorex_araneus
ENSMODG00000001177	BMS1	99	75.495	ENSSPUG00000014454	BMS1	99	75.417	Sphenodon_punctatus
ENSMODG00000001177	BMS1	99	78.806	ENSSSCG00000010198	BMS1	99	79.511	Sus_scrofa
ENSMODG00000001177	BMS1	99	71.903	ENSTGUG00000006302	-	99	73.389	Taeniopygia_guttata
ENSMODG00000001177	BMS1	86	65.253	ENSTRUG00000008028	bms1	99	61.808	Takifugu_rubripes
ENSMODG00000001177	BMS1	99	58.529	ENSTNIG00000006216	bms1	89	64.848	Tetraodon_nigroviridis
ENSMODG00000001177	BMS1	60	85.382	ENSTBEG00000001673	-	63	84.281	Tupaia_belangeri
ENSMODG00000001177	BMS1	99	79.554	ENSUAMG00000023996	BMS1	99	79.154	Ursus_americanus
ENSMODG00000001177	BMS1	99	79.477	ENSUMAG00000016523	BMS1	99	79.077	Ursus_maritimus
ENSMODG00000001177	BMS1	88	73.356	ENSVPAG00000007477	BMS1	94	87.391	Vicugna_pacos
ENSMODG00000001177	BMS1	99	79.770	ENSVVUG00000021305	BMS1	99	78.648	Vulpes_vulpes
ENSMODG00000001177	BMS1	98	65.474	ENSXETG00000008158	bms1	99	65.493	Xenopus_tropicalis
ENSMODG00000001177	BMS1	81	71.854	ENSXCOG00000000506	bms1	96	76.528	Xiphophorus_couchianus
ENSMODG00000001177	BMS1	85	68.109	ENSXMAG00000014236	bms1	99	64.684	Xiphophorus_maculatus