EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000001178 (Gene tree)
Gene ID: 100024861
Gene Symbol: SAFB2
Alias: KIAA0138
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 41110 bases
Position: chr3:443004712-443045821
Accession: 21605
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000001412	RRM_5	PF13893.6	3.2e-06	1	1
ENSMODP00000001412	RRM_1	PF00076.22	4.4e-14	1	1
ENSMODP00000001412	SAP	PF02037.27	6.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000001440	SAFB2-201	4951	-	ENSMODP00000001412	951 (aa)	-	F7GHE1

Gene Model

Click here to download ENSMODG00000001178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000001178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000001178	SAFB2	100	76.545	ENSMODG00000001236	SAFB	98	76.981

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000001178	SAFB2	100	71.813	ENSG00000130254	SAFB2	98	72.334	Homo_sapiens
ENSMODG00000001178	SAFB2	100	70.613	ENSAMEG00000012146	SAFB2	98	71.323	Ailuropoda_melanoleuca
ENSMODG00000001178	SAFB2	100	72.435	ENSANAG00000031936	SAFB2	98	72.862	Aotus_nancymaae
ENSMODG00000001178	SAFB2	100	69.792	ENSBTAG00000001790	SAFB2	98	70.276	Bos_taurus
ENSMODG00000001178	SAFB2	100	72.332	ENSCAFG00000018814	SAFB2	98	72.967	Canis_familiaris
ENSMODG00000001178	SAFB2	100	72.332	ENSCAFG00020018939	SAFB2	98	72.967	Canis_lupus_dingo
ENSMODG00000001178	SAFB2	100	70.188	ENSCHIG00000024547	SAFB2	98	70.896	Capra_hircus
ENSMODG00000001178	SAFB2	93	52.570	ENSCAPG00000011771	SAFB2	100	54.037	Cavia_aperea
ENSMODG00000001178	SAFB2	100	64.545	ENSCPOG00000011394	SAFB2	98	65.222	Cavia_porcellus
ENSMODG00000001178	SAFB2	100	71.963	ENSCCAG00000017348	SAFB2	98	72.593	Cebus_capucinus
ENSMODG00000001178	SAFB2	100	71.162	ENSCATG00000039497	SAFB2	98	71.670	Cercocebus_atys
ENSMODG00000001178	SAFB2	100	71.917	ENSCSAG00000009959	SAFB2	97	72.516	Chlorocebus_sabaeus
ENSMODG00000001178	SAFB2	75	64.854	ENSCHOG00000010684	SAFB2	99	65.132	Choloepus_hoffmanni
ENSMODG00000001178	SAFB2	100	69.223	ENSCANG00000024675	SAFB2	98	69.053	Colobus_angolensis_palliatus
ENSMODG00000001178	SAFB2	100	60.714	ENSCGRG00001015833	Safb2	98	61.117	Cricetulus_griseus_chok1gshd
ENSMODG00000001178	SAFB2	100	60.714	ENSCGRG00000011131	Safb2	98	61.117	Cricetulus_griseus_crigri
ENSMODG00000001178	SAFB2	95	63.588	ENSDORG00000016199	Safb2	97	63.239	Dipodomys_ordii
ENSMODG00000001178	SAFB2	88	70.130	ENSEASG00005022952	SAFB2	91	70.035	Equus_asinus_asinus
ENSMODG00000001178	SAFB2	100	69.678	ENSECAG00000018978	SAFB2	98	70.021	Equus_caballus
ENSMODG00000001178	SAFB2	100	71.473	ENSFCAG00000011834	SAFB2	98	72.199	Felis_catus
ENSMODG00000001178	SAFB2	93	65.000	ENSFDAG00000020009	SAFB2	97	65.455	Fukomys_damarensis
ENSMODG00000001178	SAFB2	100	68.383	ENSGGOG00000015093	SAFB2	98	69.748	Gorilla_gorilla
ENSMODG00000001178	SAFB2	100	69.898	ENSHGLG00000017442	SAFB2	98	70.251	Heterocephalus_glaber_female
ENSMODG00000001178	SAFB2	99	70.938	ENSLAFG00000003836	SAFB2	97	70.438	Loxodonta_africana
ENSMODG00000001178	SAFB2	100	72.021	ENSMFAG00000039706	SAFB2	98	72.545	Macaca_fascicularis
ENSMODG00000001178	SAFB2	100	72.332	ENSMMUG00000017968	SAFB2	98	72.862	Macaca_mulatta
ENSMODG00000001178	SAFB2	100	67.492	ENSMNEG00000032042	SAFB2	98	67.718	Macaca_nemestrina
ENSMODG00000001178	SAFB2	100	72.228	ENSMLEG00000034562	SAFB2	98	72.756	Mandrillus_leucophaeus
ENSMODG00000001178	SAFB2	81	65.866	ENSMAUG00000011573	Safb2	92	65.866	Mesocricetus_auratus
ENSMODG00000001178	SAFB2	100	72.671	ENSMICG00000008711	SAFB2	98	72.756	Microcebus_murinus
ENSMODG00000001178	SAFB2	100	59.182	ENSMOCG00000006827	Safb2	98	59.551	Microtus_ochrogaster
ENSMODG00000001178	SAFB2	99	59.602	MGP_CAROLIEiJ_G0021779	Safb2	98	59.879	Mus_caroli
ENSMODG00000001178	SAFB2	99	59.363	ENSMUSG00000042625	Safb2	98	59.637	Mus_musculus
ENSMODG00000001178	SAFB2	99	59.159	MGP_PahariEiJ_G0020768	Safb2	98	59.432	Mus_pahari
ENSMODG00000001178	SAFB2	89	63.429	MGP_SPRETEiJ_G0022690	Safb2	98	55.802	Mus_spretus
ENSMODG00000001178	SAFB2	100	71.547	ENSMPUG00000006106	SAFB2	90	72.275	Mustela_putorius_furo
ENSMODG00000001178	SAFB2	100	69.396	ENSMLUG00000001050	SAFB2	98	67.610	Myotis_lucifugus
ENSMODG00000001178	SAFB2	100	71.088	ENSNLEG00000013514	SAFB2	98	71.489	Nomascus_leucogenys
ENSMODG00000001178	SAFB2	93	91.114	ENSMEUG00000002456	SAFB2	100	91.114	Notamacropus_eugenii
ENSMODG00000001178	SAFB2	100	60.681	ENSOPRG00000011523	-	97	61.164	Ochotona_princeps
ENSMODG00000001178	SAFB2	100	67.595	ENSODEG00000014751	SAFB2	98	68.349	Octodon_degus
ENSMODG00000001178	SAFB2	100	71.429	ENSOGAG00000006855	SAFB2	98	71.383	Otolemur_garnettii
ENSMODG00000001178	SAFB2	98	64.021	ENSOARG00000007982	SAFB2	97	63.636	Ovis_aries
ENSMODG00000001178	SAFB2	100	71.917	ENSPPAG00000043392	SAFB2	98	72.439	Pan_paniscus
ENSMODG00000001178	SAFB2	100	71.680	ENSPPRG00000011310	SAFB2	98	72.410	Panthera_pardus
ENSMODG00000001178	SAFB2	80	68.203	ENSPTIG00000015120	SAFB2	90	68.375	Panthera_tigris_altaica
ENSMODG00000001178	SAFB2	100	68.361	ENSPTRG00000010334	SAFB2	98	68.790	Pan_troglodytes
ENSMODG00000001178	SAFB2	100	72.124	ENSPANG00000007004	SAFB2	98	72.650	Papio_anubis
ENSMODG00000001178	SAFB2	100	57.848	ENSPEMG00000016015	Safb2	98	58.081	Peromyscus_maniculatus_bairdii
ENSMODG00000001178	SAFB2	62	95.085	ENSPCIG00000009518	-	99	95.085	Phascolarctos_cinereus
ENSMODG00000001178	SAFB2	100	72.021	ENSPPYG00000009427	SAFB2	98	72.545	Pongo_abelii
ENSMODG00000001178	SAFB2	100	68.542	ENSPCAG00000006352	SAFB2	98	69.851	Procavia_capensis
ENSMODG00000001178	SAFB2	100	71.206	ENSPCOG00000023260	SAFB2	98	71.246	Propithecus_coquereli
ENSMODG00000001178	SAFB2	58	73.913	ENSPVAG00000004902	-	71	73.913	Pteropus_vampyrus
ENSMODG00000001178	SAFB2	83	59.330	ENSRNOG00000049511	AABR07066522.1	99	59.662	Rattus_norvegicus
ENSMODG00000001178	SAFB2	87	73.920	ENSRBIG00000033446	SAFB2	96	77.133	Rhinopithecus_bieti
ENSMODG00000001178	SAFB2	100	72.435	ENSRROG00000006606	SAFB2	98	72.862	Rhinopithecus_roxellana
ENSMODG00000001178	SAFB2	100	70.777	ENSSBOG00000032315	SAFB2	97	72.879	Saimiri_boliviensis_boliviensis
ENSMODG00000001178	SAFB2	97	93.818	ENSSHAG00000012703	SAFB2	98	93.818	Sarcophilus_harrisii
ENSMODG00000001178	SAFB2	81	61.410	ENSSARG00000000649	SAFB2	99	63.205	Sorex_araneus
ENSMODG00000001178	SAFB2	100	72.642	ENSSSCG00000013523	SAFB2	98	73.073	Sus_scrofa
ENSMODG00000001178	SAFB2	72	63.415	ENSTBEG00000012709	SAFB2	79	63.415	Tupaia_belangeri
ENSMODG00000001178	SAFB2	93	66.999	ENSTTRG00000013585	SAFB2	93	66.777	Tursiops_truncatus
ENSMODG00000001178	SAFB2	99	73.679	ENSUAMG00000024695	SAFB2	95	74.169	Ursus_americanus
ENSMODG00000001178	SAFB2	84	69.153	ENSUMAG00000009585	SAFB2	88	69.916	Ursus_maritimus
ENSMODG00000001178	SAFB2	74	83.333	ENSVPAG00000012041	SAFB2	88	83.696	Vicugna_pacos
ENSMODG00000001178	SAFB2	100	72.642	ENSVVUG00000013695	SAFB2	93	78.351	Vulpes_vulpes