EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000001387 (Gene tree)
Gene ID: 100014602
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 38039 bases
Position: chr7:60882666-60920704
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000001676	IF-2	PF11987.8	1.5e-19	1	1
ENSMODP00000001676	GTP_EFTU	PF00009.27	6.2e-30	1	1
ENSMODP00000001676	MMR_HSR1	PF01926.23	1.9e-06	1	1
ENSMODP00000001676	GTP_EFTU_D2	PF03144.25	3.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000001711	-	7951	-	ENSMODP00000001676	1193 (aa)	-	F7FJ04

Gene Model

Click here to download ENSMODG00000001387's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000001387's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000001387	-	73	75.882	ENSAPOG00000004375	eif5b	89	68.716	Acanthochromis_polyacanthus
ENSMODG00000001387	-	68	77.262	ENSACIG00000024324	eif5b	79	77.262	Amphilophus_citrinellus
ENSMODG00000001387	-	52	87.621	ENSAOCG00000018386	eif5b	89	69.139	Amphiprion_ocellaris
ENSMODG00000001387	-	52	87.781	ENSATEG00000006765	eif5b	87	68.407	Anabas_testudineus
ENSMODG00000001387	-	50	87.874	ENSATEG00000011451	-	78	74.331	Anabas_testudineus
ENSMODG00000001387	-	52	87.781	ENSATEG00000011259	eif5b	64	86.854	Anabas_testudineus
ENSMODG00000001387	-	100	75.515	ENSACAG00000008305	-	99	75.350	Anolis_carolinensis
ENSMODG00000001387	-	52	87.460	ENSACLG00000005530	eif5b	67	84.557	Astatotilapia_calliptera
ENSMODG00000001387	-	52	88.746	ENSAMXG00000018383	eif5b	89	69.126	Astyanax_mexicanus
ENSMODG00000001387	-	52	56.913	WBGene00021857	iffb-1	61	55.623	Caenorhabditis_elegans
ENSMODG00000001387	-	98	76.703	ENSCJAG00000009960	-	98	76.703	Callithrix_jacchus
ENSMODG00000001387	-	99	77.246	ENSCAPG00000014619	-	98	76.151	Cavia_aperea
ENSMODG00000001387	-	100	80.855	ENSCPOG00000011967	-	99	80.905	Cavia_porcellus
ENSMODG00000001387	-	56	75.000	ENSCHOG00000002137	-	67	75.000	Choloepus_hoffmanni
ENSMODG00000001387	-	52	64.887	ENSCSAVG00000008808	-	81	55.665	Ciona_savignyi
ENSMODG00000001387	-	52	88.907	ENSCSEG00000014153	eif5b	89	66.637	Cynoglossus_semilaevis
ENSMODG00000001387	-	52	87.138	ENSCVAG00000019619	eif5b	89	67.489	Cyprinodon_variegatus
ENSMODG00000001387	-	52	88.746	ENSDARG00000016548	eif5b	84	70.353	Danio_rerio
ENSMODG00000001387	-	51	70.147	FBgn0026259	eIF5B	68	59.146	Drosophila_melanogaster
ENSMODG00000001387	-	59	63.699	ENSEBUG00000013800	eif5b	57	64.159	Eptatretus_burgeri
ENSMODG00000001387	-	58	100.000	ENSEEUG00000001093	-	57	100.000	Erinaceus_europaeus
ENSMODG00000001387	-	54	85.000	ENSELUG00000001132	eif5b	91	67.596	Esox_lucius
ENSMODG00000001387	-	73	71.477	ENSGACG00000010536	eif5b	87	84.144	Gasterosteus_aculeatus
ENSMODG00000001387	-	55	94.082	ENSGAGG00000022242	-	97	94.082	Gopherus_agassizii
ENSMODG00000001387	-	73	74.103	ENSHBUG00000023319	eif5b	89	67.775	Haplochromis_burtoni
ENSMODG00000001387	-	52	86.977	ENSHCOG00000002807	eif5b	90	67.366	Hippocampus_comes
ENSMODG00000001387	-	52	88.746	ENSIPUG00000020910	eif5b	88	70.583	Ictalurus_punctatus
ENSMODG00000001387	-	52	87.781	ENSKMAG00000004325	eif5b	89	67.407	Kryptolebias_marmoratus
ENSMODG00000001387	-	73	71.109	ENSLBEG00000027090	eif5b	98	64.299	Labrus_bergylta
ENSMODG00000001387	-	73	78.668	ENSLACG00000011688	eif5b	100	70.097	Latimeria_chalumnae
ENSMODG00000001387	-	52	86.977	ENSMAMG00000022568	eif5b	89	66.606	Mastacembelus_armatus
ENSMODG00000001387	-	73	74.103	ENSMZEG00005012696	eif5b	89	67.712	Maylandia_zebra
ENSMODG00000001387	-	52	86.656	ENSMALG00000005862	eif5b	89	66.092	Monopterus_albus
ENSMODG00000001387	-	78	71.932	ENSNBRG00000021912	eif5b	93	65.370	Neolamprologus_brichardi
ENSMODG00000001387	-	81	100.000	ENSMEUG00000007080	-	82	100.000	Notamacropus_eugenii
ENSMODG00000001387	-	52	86.817	ENSONIG00000018749	eif5b	89	67.864	Oreochromis_niloticus
ENSMODG00000001387	-	100	78.625	ENSOANG00000004621	-	99	77.805	Ornithorhynchus_anatinus
ENSMODG00000001387	-	100	82.619	ENSOCUG00000021154	-	100	82.372	Oryctolagus_cuniculus
ENSMODG00000001387	-	73	74.943	ENSORLG00000001525	eif5b	89	67.600	Oryzias_latipes
ENSMODG00000001387	-	73	74.458	ENSORLG00020005327	eif5b	89	67.193	Oryzias_latipes_hni
ENSMODG00000001387	-	73	74.600	ENSORLG00015008949	eif5b	89	66.697	Oryzias_latipes_hsok
ENSMODG00000001387	-	66	76.923	ENSOMEG00000016539	eif5b	99	76.777	Oryzias_melastigma
ENSMODG00000001387	-	52	87.299	ENSPKIG00000011133	eif5b	86	69.643	Paramormyrops_kingsleyae
ENSMODG00000001387	-	57	81.534	ENSPSIG00000014914	-	99	78.686	Pelodiscus_sinensis
ENSMODG00000001387	-	68	64.627	ENSPMAG00000004508	eif5b	67	64.614	Petromyzon_marinus
ENSMODG00000001387	-	52	87.621	ENSPFOG00000007543	eif5b	94	84.899	Poecilia_formosa
ENSMODG00000001387	-	52	87.621	ENSPLAG00000015913	eif5b	89	68.077	Poecilia_latipinna
ENSMODG00000001387	-	52	87.621	ENSPMEG00000006712	eif5b	85	71.027	Poecilia_mexicana
ENSMODG00000001387	-	71	91.304	ENSPCAG00000007829	-	65	81.922	Procavia_capensis
ENSMODG00000001387	-	99	78.878	ENSPCOG00000019508	-	100	97.428	Propithecus_coquereli
ENSMODG00000001387	-	83	97.143	ENSPVAG00000006592	-	87	88.430	Pteropus_vampyrus
ENSMODG00000001387	-	57	86.859	ENSPNYG00000021051	eif5b	93	65.536	Pundamilia_nyererei
ENSMODG00000001387	-	52	89.389	ENSPNAG00000023852	eif5b	88	69.763	Pygocentrus_nattereri
ENSMODG00000001387	-	50	51.329	YAL035W	FUN12	60	51.329	Saccharomyces_cerevisiae
ENSMODG00000001387	-	52	87.781	ENSSFOG00015000594	eif5b	88	67.142	Scleropages_formosus
ENSMODG00000001387	-	68	74.756	ENSSMAG00000000045	eif5b	100	63.845	Scophthalmus_maximus
ENSMODG00000001387	-	52	86.977	ENSSDUG00000005847	eif5b	80	78.747	Seriola_dumerili
ENSMODG00000001387	-	52	87.138	ENSSLDG00000013738	eif5b	81	78.773	Seriola_lalandi_dorsalis
ENSMODG00000001387	-	68	73.645	ENSSPAG00000005335	eif5b	80	73.587	Stegastes_partitus
ENSMODG00000001387	-	74	73.168	ENSTNIG00000006580	eif5b	96	73.672	Tetraodon_nigroviridis
ENSMODG00000001387	-	75	95.633	ENSTBEG00000009133	-	79	95.633	Tupaia_belangeri
ENSMODG00000001387	-	100	68.101	ENSXETG00000019377	eif5b	99	67.581	Xenopus_tropicalis
ENSMODG00000001387	-	52	87.040	ENSXCOG00000016681	eif5b	99	70.293	Xiphophorus_couchianus
ENSMODG00000001387	-	52	87.159	ENSXMAG00000001002	eif5b	99	70.335	Xiphophorus_maculatus