EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000001402 (Gene tree)
Gene ID: 100019193
Gene Symbol: -
Alias: -
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 6293 bases
Position: chr8:303640065-303646357
Accession: 100019193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000001692	SHS2_Rpb7-N	PF03876.17	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000001727	-	2606	-	ENSMODP00000001692	456 (aa)	XP_007505471	F7F5A4

Gene Model

Click here to download ENSMODG00000001402's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000001402's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000001402	-	68	58.974	ENSG00000105849	TWISTNB	86	59.866	Homo_sapiens
ENSMODG00000001402	-	70	40.000	ENSAPOG00000011796	twistnb	78	44.147	Acanthochromis_polyacanthus
ENSMODG00000001402	-	68	51.676	ENSAMEG00000008558	TWISTNB	87	52.924	Ailuropoda_melanoleuca
ENSMODG00000001402	-	69	40.708	ENSAOCG00000024200	twistnb	78	43.624	Amphiprion_ocellaris
ENSMODG00000001402	-	69	40.708	ENSAPEG00000016750	twistnb	78	43.624	Amphiprion_percula
ENSMODG00000001402	-	67	42.679	ENSATEG00000017956	twistnb	84	43.533	Anabas_testudineus
ENSMODG00000001402	-	65	59.667	ENSANAG00000026418	TWISTNB	87	58.940	Aotus_nancymaae
ENSMODG00000001402	-	66	40.514	ENSAMXG00000035868	twistnb	82	41.034	Astyanax_mexicanus
ENSMODG00000001402	-	71	59.816	ENSBTAG00000006721	TWISTNB	84	62.278	Bos_taurus
ENSMODG00000001402	-	65	59.801	ENSCJAG00000001148	TWISTNB	87	58.416	Callithrix_jacchus
ENSMODG00000001402	-	71	55.556	ENSCAFG00000002511	TWISTNB	84	58.562	Canis_familiaris
ENSMODG00000001402	-	71	55.589	ENSCAFG00020002140	TWISTNB	78	59.028	Canis_lupus_dingo
ENSMODG00000001402	-	71	59.574	ENSCHIG00000024078	TWISTNB	84	61.034	Capra_hircus
ENSMODG00000001402	-	74	57.185	ENSTSYG00000001471	TWISTNB	83	61.111	Carlito_syrichta
ENSMODG00000001402	-	72	58.133	ENSCPOG00000031651	TWISTNB	87	60.067	Cavia_porcellus
ENSMODG00000001402	-	68	58.521	ENSCCAG00000026416	TWISTNB	86	57.143	Cebus_capucinus
ENSMODG00000001402	-	68	58.654	ENSCATG00000035621	TWISTNB	86	59.532	Cercocebus_atys
ENSMODG00000001402	-	70	60.248	ENSCLAG00000012696	TWISTNB	87	61.409	Chinchilla_lanigera
ENSMODG00000001402	-	68	58.654	ENSCSAG00000013544	TWISTNB	86	59.532	Chlorocebus_sabaeus
ENSMODG00000001402	-	68	49.521	ENSCPBG00000000367	TWISTNB	89	52.203	Chrysemys_picta_bellii
ENSMODG00000001402	-	68	58.654	ENSCANG00000038759	TWISTNB	86	59.532	Colobus_angolensis_palliatus
ENSMODG00000001402	-	65	57.843	ENSCGRG00001000499	Twistnb	85	59.364	Cricetulus_griseus_chok1gshd
ENSMODG00000001402	-	71	56.881	ENSDNOG00000006438	-	84	60.490	Dasypus_novemcinctus
ENSMODG00000001402	-	63	60.339	ENSDORG00000007795	Twistnb	87	59.507	Dipodomys_ordii
ENSMODG00000001402	-	70	62.037	ENSEASG00005021702	TWISTNB	83	63.087	Equus_asinus_asinus
ENSMODG00000001402	-	70	61.610	ENSECAG00000014563	TWISTNB	83	62.963	Equus_caballus
ENSMODG00000001402	-	76	39.788	ENSELUG00000000098	TWISTNB	80	43.434	Esox_lucius
ENSMODG00000001402	-	72	58.258	ENSFCAG00000025987	TWISTNB	87	60.606	Felis_catus
ENSMODG00000001402	-	64	51.111	ENSFALG00000009761	TWISTNB	93	51.525	Ficedula_albicollis
ENSMODG00000001402	-	67	60.000	ENSFDAG00000017368	TWISTNB	87	60.067	Fukomys_damarensis
ENSMODG00000001402	-	76	49.451	ENSGALG00000010863	TWISTNB	83	51.622	Gallus_gallus
ENSMODG00000001402	-	68	59.048	ENSGGOG00000026888	TWISTNB	86	59.866	Gorilla_gorilla
ENSMODG00000001402	-	71	60.429	ENSHGLG00000010976	TWISTNB	83	61.484	Heterocephalus_glaber_female
ENSMODG00000001402	-	64	61.224	ENSHGLG00100005410	TWISTNB	83	61.484	Heterocephalus_glaber_male
ENSMODG00000001402	-	72	55.398	ENSSTOG00000022702	TWISTNB	81	60.000	Ictidomys_tridecemlineatus
ENSMODG00000001402	-	70	58.385	ENSJJAG00000015887	Twistnb	83	60.993	Jaculus_jaculus
ENSMODG00000001402	-	68	49.216	ENSLACG00000010508	TWISTNB	85	51.155	Latimeria_chalumnae
ENSMODG00000001402	-	71	59.215	ENSLAFG00000008755	TWISTNB	88	59.934	Loxodonta_africana
ENSMODG00000001402	-	68	58.974	ENSMFAG00000045328	TWISTNB	86	59.866	Macaca_fascicularis
ENSMODG00000001402	-	68	59.164	ENSMMUG00000009609	TWISTNB	86	59.866	Macaca_mulatta
ENSMODG00000001402	-	70	58.491	ENSMNEG00000041159	TWISTNB	86	59.866	Macaca_nemestrina
ENSMODG00000001402	-	68	58.654	ENSMLEG00000042783	TWISTNB	86	59.532	Mandrillus_leucophaeus
ENSMODG00000001402	-	68	60.383	ENSMICG00000036489	TWISTNB	89	61.921	Microcebus_murinus
ENSMODG00000001402	-	61	61.702	ENSMOCG00000003458	Twistnb	86	61.484	Microtus_ochrogaster
ENSMODG00000001402	-	74	40.437	ENSMMOG00000020085	twistnb	84	40.244	Mola_mola
ENSMODG00000001402	-	65	59.396	MGP_CAROLIEiJ_G0017692	Twistnb	89	59.060	Mus_caroli
ENSMODG00000001402	-	64	59.661	ENSMUSG00000020561	Twistnb	85	59.507	Mus_musculus
ENSMODG00000001402	-	64	59.933	MGP_PahariEiJ_G0029450	Twistnb	85	59.364	Mus_pahari
ENSMODG00000001402	-	65	58.923	MGP_SPRETEiJ_G0018534	Twistnb	89	59.060	Mus_spretus
ENSMODG00000001402	-	68	60.191	ENSMPUG00000013948	TWISTNB	82	61.204	Mustela_putorius_furo
ENSMODG00000001402	-	68	57.419	ENSMLUG00000008848	TWISTNB	94	58.804	Myotis_lucifugus
ENSMODG00000001402	-	68	59.807	ENSNLEG00000035755	TWISTNB	87	60.201	Nomascus_leucogenys
ENSMODG00000001402	-	68	61.875	ENSOPRG00000016109	TWISTNB	85	62.759	Ochotona_princeps
ENSMODG00000001402	-	68	60.510	ENSODEG00000007222	TWISTNB	87	60.269	Octodon_degus
ENSMODG00000001402	-	64	43.730	ENSORLG00000004005	twistnb	70	44.966	Oryzias_latipes
ENSMODG00000001402	-	65	43.631	ENSORLG00020002579	twistnb	78	44.482	Oryzias_latipes_hni
ENSMODG00000001402	-	64	44.551	ENSORLG00015013403	twistnb	69	44.966	Oryzias_latipes_hsok
ENSMODG00000001402	-	61	60.284	ENSOGAG00000009189	TWISTNB	83	61.324	Otolemur_garnettii
ENSMODG00000001402	-	71	59.756	ENSOARG00000009803	TWISTNB	83	61.246	Ovis_aries
ENSMODG00000001402	-	68	58.974	ENSPPAG00000034623	TWISTNB	86	59.866	Pan_paniscus
ENSMODG00000001402	-	72	57.658	ENSPPRG00000005877	TWISTNB	87	60.606	Panthera_pardus
ENSMODG00000001402	-	64	60.269	ENSPTIG00000021539	TWISTNB	92	61.071	Panthera_tigris_altaica
ENSMODG00000001402	-	68	59.295	ENSPTRG00000018962	TWISTNB	86	60.201	Pan_troglodytes
ENSMODG00000001402	-	68	58.654	ENSPANG00000015736	TWISTNB	86	59.532	Papio_anubis
ENSMODG00000001402	-	68	42.462	ENSPMGG00000019023	twistnb	78	41.946	Periophthalmus_magnuspinnatus
ENSMODG00000001402	-	67	80.392	ENSPCIG00000017456	TWISTNB	89	81.605	Phascolarctos_cinereus
ENSMODG00000001402	-	68	60.383	ENSPPYG00000017752	TWISTNB	86	58.278	Pongo_abelii
ENSMODG00000001402	-	68	58.917	ENSPCOG00000017601	TWISTNB	88	61.056	Propithecus_coquereli
ENSMODG00000001402	-	72	57.958	ENSPVAG00000015574	TWISTNB	87	60.201	Pteropus_vampyrus
ENSMODG00000001402	-	71	38.776	ENSPNAG00000011956	twistnb	81	42.525	Pygocentrus_nattereri
ENSMODG00000001402	-	64	57.860	ENSRNOG00000010750	Twistnb	87	57.093	Rattus_norvegicus
ENSMODG00000001402	-	68	58.730	ENSRBIG00000043007	TWISTNB	85	59.532	Rhinopithecus_bieti
ENSMODG00000001402	-	68	58.917	ENSRROG00000040155	TWISTNB	86	59.532	Rhinopithecus_roxellana
ENSMODG00000001402	-	65	58.667	ENSSBOG00000023188	TWISTNB	87	58.278	Saimiri_boliviensis_boliviensis
ENSMODG00000001402	-	63	43.878	ENSSFOG00015012788	twistnb	78	47.368	Scleropages_formosus
ENSMODG00000001402	-	70	42.814	ENSSMAG00000012792	twistnb	85	43.396	Scophthalmus_maximus
ENSMODG00000001402	-	66	39.877	ENSSDUG00000007038	twistnb	85	41.846	Seriola_dumerili
ENSMODG00000001402	-	64	47.712	ENSSPUG00000007595	TWISTNB	93	47.945	Sphenodon_punctatus
ENSMODG00000001402	-	69	60.991	ENSSSCG00000025298	TWISTNB	84	63.028	Sus_scrofa
ENSMODG00000001402	-	67	42.722	ENSTNIG00000017778	twistnb	84	45.329	Tetraodon_nigroviridis
ENSMODG00000001402	-	72	59.347	ENSTBEG00000003554	TWISTNB	88	62.951	Tupaia_belangeri
ENSMODG00000001402	-	68	61.465	ENSUAMG00000017593	TWISTNB	87	62.752	Ursus_americanus
ENSMODG00000001402	-	68	61.465	ENSUMAG00000022203	TWISTNB	87	62.752	Ursus_maritimus
ENSMODG00000001402	-	71	55.856	ENSVVUG00000008386	TWISTNB	85	59.375	Vulpes_vulpes