EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000001414 (Gene tree)
Gene ID: 100016063
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 18469 bases
Position: chr8:87193736-87212204
Accession: 100016063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000001716	RtcB	PF01139.17	7.2e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000001751	RTCB-201	3884	-	ENSMODP00000001716	505 (aa)	XP_001366104	F7BCY1

Gene Model

Click here to download ENSMODG00000001414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000001414's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000001414	RTCB	100	98.416	ENSG00000100220	RTCB	100	98.416	Homo_sapiens
ENSMODG00000001414	RTCB	100	94.455	ENSAPOG00000006040	rtcb	100	94.455	Acanthochromis_polyacanthus
ENSMODG00000001414	RTCB	100	98.218	ENSAMEG00000016152	RTCB	100	98.218	Ailuropoda_melanoleuca
ENSMODG00000001414	RTCB	100	90.099	ENSACIG00000009083	rtcb	100	90.099	Amphilophus_citrinellus
ENSMODG00000001414	RTCB	100	94.653	ENSAOCG00000005662	rtcb	100	95.217	Amphiprion_ocellaris
ENSMODG00000001414	RTCB	100	94.653	ENSAPEG00000024701	rtcb	100	94.653	Amphiprion_percula
ENSMODG00000001414	RTCB	96	89.528	ENSAPEG00000024653	rtcb	100	89.528	Amphiprion_percula
ENSMODG00000001414	RTCB	100	94.851	ENSATEG00000000618	rtcb	100	94.851	Anabas_testudineus
ENSMODG00000001414	RTCB	100	94.605	ENSACAG00000014817	RTCB	100	94.605	Anolis_carolinensis
ENSMODG00000001414	RTCB	72	97.222	ENSANAG00000023724	-	100	61.858	Aotus_nancymaae
ENSMODG00000001414	RTCB	100	82.376	ENSANAG00000018191	-	91	82.376	Aotus_nancymaae
ENSMODG00000001414	RTCB	100	93.267	ENSACLG00000008367	rtcb	100	94.130	Astatotilapia_calliptera
ENSMODG00000001414	RTCB	100	94.851	ENSAMXG00000042320	rtcb	100	94.851	Astyanax_mexicanus
ENSMODG00000001414	RTCB	100	98.416	ENSBTAG00000011070	RTCB	100	98.416	Bos_taurus
ENSMODG00000001414	RTCB	100	73.069	WBGene00008877	rtcb-1	100	73.069	Caenorhabditis_elegans
ENSMODG00000001414	RTCB	100	98.020	ENSCJAG00000006128	RTCB	100	98.020	Callithrix_jacchus
ENSMODG00000001414	RTCB	100	93.861	ENSCAFG00000010789	-	100	93.861	Canis_familiaris
ENSMODG00000001414	RTCB	100	98.218	ENSCAFG00000001785	RTCB	100	98.218	Canis_familiaris
ENSMODG00000001414	RTCB	100	98.218	ENSCAFG00020004890	-	100	98.218	Canis_lupus_dingo
ENSMODG00000001414	RTCB	87	94.318	ENSCAFG00020018953	-	99	94.318	Canis_lupus_dingo
ENSMODG00000001414	RTCB	100	98.416	ENSCHIG00000027009	-	100	98.416	Capra_hircus
ENSMODG00000001414	RTCB	100	98.218	ENSTSYG00000012320	RTCB	100	98.218	Carlito_syrichta
ENSMODG00000001414	RTCB	94	98.532	ENSCAPG00000011647	RTCB	96	98.532	Cavia_aperea
ENSMODG00000001414	RTCB	100	98.020	ENSCCAG00000000618	RTCB	100	98.020	Cebus_capucinus
ENSMODG00000001414	RTCB	100	98.218	ENSCATG00000033424	RTCB	100	98.218	Cercocebus_atys
ENSMODG00000001414	RTCB	100	98.020	ENSCLAG00000007997	RTCB	100	98.020	Chinchilla_lanigera
ENSMODG00000001414	RTCB	100	98.020	ENSCSAG00000008351	RTCB	100	98.020	Chlorocebus_sabaeus
ENSMODG00000001414	RTCB	100	83.564	ENSCHOG00000009123	RTCB	100	83.564	Choloepus_hoffmanni
ENSMODG00000001414	RTCB	100	97.624	ENSCPBG00000023184	RTCB	100	97.624	Chrysemys_picta_bellii
ENSMODG00000001414	RTCB	100	81.188	ENSCING00000003830	-	100	81.188	Ciona_intestinalis
ENSMODG00000001414	RTCB	100	81.584	ENSCSAVG00000008124	-	100	80.638	Ciona_savignyi
ENSMODG00000001414	RTCB	100	94.455	ENSCANG00000001891	RTCB	100	94.455	Colobus_angolensis_palliatus
ENSMODG00000001414	RTCB	100	98.218	ENSCGRG00001011173	Rtcb	100	98.218	Cricetulus_griseus_chok1gshd
ENSMODG00000001414	RTCB	93	98.514	ENSCGRG00000009587	-	96	98.514	Cricetulus_griseus_crigri
ENSMODG00000001414	RTCB	100	93.663	ENSCSEG00000003986	rtcb	100	93.663	Cynoglossus_semilaevis
ENSMODG00000001414	RTCB	82	93.029	ENSCVAG00000000569	rtcb	95	93.029	Cyprinodon_variegatus
ENSMODG00000001414	RTCB	100	94.851	ENSDARG00000101047	rtcb	100	94.851	Danio_rerio
ENSMODG00000001414	RTCB	80	95.332	ENSDNOG00000012425	RTCB	99	95.332	Dasypus_novemcinctus
ENSMODG00000001414	RTCB	100	98.416	ENSDORG00000010855	Rtcb	100	98.416	Dipodomys_ordii
ENSMODG00000001414	RTCB	99	85.288	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
ENSMODG00000001414	RTCB	100	91.485	ENSETEG00000001988	RTCB	100	91.485	Echinops_telfairi
ENSMODG00000001414	RTCB	100	85.149	ENSEBUG00000014235	rtcb	100	85.149	Eptatretus_burgeri
ENSMODG00000001414	RTCB	100	98.614	ENSEASG00005019059	RTCB	100	98.614	Equus_asinus_asinus
ENSMODG00000001414	RTCB	100	98.614	ENSECAG00000023998	RTCB	100	98.614	Equus_caballus
ENSMODG00000001414	RTCB	89	89.485	ENSEEUG00000006251	RTCB	100	89.485	Erinaceus_europaeus
ENSMODG00000001414	RTCB	100	83.554	ENSELUG00000009275	rtcb	100	83.554	Esox_lucius
ENSMODG00000001414	RTCB	100	98.416	ENSFCAG00000026480	RTCB	100	98.416	Felis_catus
ENSMODG00000001414	RTCB	100	98.218	ENSFALG00000013334	RTCB	100	98.218	Ficedula_albicollis
ENSMODG00000001414	RTCB	100	98.218	ENSFDAG00000018150	RTCB	100	98.218	Fukomys_damarensis
ENSMODG00000001414	RTCB	100	93.861	ENSFHEG00000009595	rtcb	100	93.861	Fundulus_heteroclitus
ENSMODG00000001414	RTCB	100	92.277	ENSGMOG00000018882	rtcb	100	92.277	Gadus_morhua
ENSMODG00000001414	RTCB	100	98.020	ENSGALG00000012611	RTCB	100	98.020	Gallus_gallus
ENSMODG00000001414	RTCB	100	94.257	ENSGAFG00000004198	rtcb	100	94.257	Gambusia_affinis
ENSMODG00000001414	RTCB	100	94.257	ENSGACG00000000586	rtcb	100	94.257	Gasterosteus_aculeatus
ENSMODG00000001414	RTCB	93	96.809	ENSGAGG00000019133	RTCB	98	96.809	Gopherus_agassizii
ENSMODG00000001414	RTCB	100	98.416	ENSGGOG00000011402	RTCB	100	98.416	Gorilla_gorilla
ENSMODG00000001414	RTCB	100	93.267	ENSHBUG00000020571	rtcb	100	93.267	Haplochromis_burtoni
ENSMODG00000001414	RTCB	100	98.218	ENSHGLG00000004492	RTCB	100	98.218	Heterocephalus_glaber_female
ENSMODG00000001414	RTCB	93	70.362	ENSHGLG00000001066	-	99	70.362	Heterocephalus_glaber_female
ENSMODG00000001414	RTCB	100	98.218	ENSHGLG00100008965	RTCB	100	98.218	Heterocephalus_glaber_male
ENSMODG00000001414	RTCB	100	92.110	ENSHCOG00000006450	rtcb	100	92.110	Hippocampus_comes
ENSMODG00000001414	RTCB	100	94.851	ENSIPUG00000015443	rtcb	100	94.851	Ictalurus_punctatus
ENSMODG00000001414	RTCB	100	98.020	ENSSTOG00000003878	RTCB	100	98.020	Ictidomys_tridecemlineatus
ENSMODG00000001414	RTCB	100	98.020	ENSJJAG00000010667	Rtcb	100	98.020	Jaculus_jaculus
ENSMODG00000001414	RTCB	100	94.059	ENSKMAG00000013178	rtcb	100	94.059	Kryptolebias_marmoratus
ENSMODG00000001414	RTCB	100	93.465	ENSLBEG00000000214	rtcb	100	93.465	Labrus_bergylta
ENSMODG00000001414	RTCB	100	94.455	ENSLBEG00000010566	RTCB	100	94.455	Labrus_bergylta
ENSMODG00000001414	RTCB	100	96.238	ENSLACG00000013033	RTCB	100	96.238	Latimeria_chalumnae
ENSMODG00000001414	RTCB	100	95.446	ENSLOCG00000016515	rtcb	99	95.446	Lepisosteus_oculatus
ENSMODG00000001414	RTCB	100	97.624	ENSLAFG00000002082	RTCB	100	97.624	Loxodonta_africana
ENSMODG00000001414	RTCB	100	98.020	ENSMFAG00000034419	RTCB	100	98.020	Macaca_fascicularis
ENSMODG00000001414	RTCB	100	98.020	ENSMMUG00000006720	RTCB	100	98.020	Macaca_mulatta
ENSMODG00000001414	RTCB	100	98.020	ENSMNEG00000040669	RTCB	100	98.020	Macaca_nemestrina
ENSMODG00000001414	RTCB	100	98.218	ENSMLEG00000040505	RTCB	100	98.218	Mandrillus_leucophaeus
ENSMODG00000001414	RTCB	100	94.851	ENSMAMG00000020676	rtcb	100	94.851	Mastacembelus_armatus
ENSMODG00000001414	RTCB	100	93.267	ENSMZEG00005018942	rtcb	100	93.267	Maylandia_zebra
ENSMODG00000001414	RTCB	100	97.633	ENSMGAG00000012805	RTCB	100	97.633	Meleagris_gallopavo
ENSMODG00000001414	RTCB	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSMODG00000001414	RTCB	100	98.218	ENSMICG00000013303	-	100	98.218	Microcebus_murinus
ENSMODG00000001414	RTCB	100	79.010	ENSMICG00000036677	-	100	79.010	Microcebus_murinus
ENSMODG00000001414	RTCB	100	98.218	ENSMOCG00000002440	Rtcb	100	98.218	Microtus_ochrogaster
ENSMODG00000001414	RTCB	100	94.653	ENSMMOG00000005987	rtcb	100	94.653	Mola_mola
ENSMODG00000001414	RTCB	100	94.257	ENSMALG00000007603	rtcb	100	94.257	Monopterus_albus
ENSMODG00000001414	RTCB	100	98.218	MGP_CAROLIEiJ_G0015689	Rtcb	100	98.218	Mus_caroli
ENSMODG00000001414	RTCB	100	98.218	ENSMUSG00000001783	Rtcb	100	98.218	Mus_musculus
ENSMODG00000001414	RTCB	100	98.218	MGP_PahariEiJ_G0031396	Rtcb	100	98.218	Mus_pahari
ENSMODG00000001414	RTCB	100	98.218	MGP_SPRETEiJ_G0016507	Rtcb	100	98.218	Mus_spretus
ENSMODG00000001414	RTCB	100	98.218	ENSMPUG00000012285	RTCB	100	98.218	Mustela_putorius_furo
ENSMODG00000001414	RTCB	100	95.464	ENSMLUG00000007803	RTCB	100	95.464	Myotis_lucifugus
ENSMODG00000001414	RTCB	75	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSMODG00000001414	RTCB	100	93.465	ENSNBRG00000017202	rtcb	100	93.465	Neolamprologus_brichardi
ENSMODG00000001414	RTCB	100	98.416	ENSNLEG00000004960	RTCB	100	98.416	Nomascus_leucogenys
ENSMODG00000001414	RTCB	100	73.663	ENSMEUG00000007809	-	100	73.663	Notamacropus_eugenii
ENSMODG00000001414	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSMODG00000001414	RTCB	100	65.743	ENSODEG00000005042	-	100	65.743	Octodon_degus
ENSMODG00000001414	RTCB	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSMODG00000001414	RTCB	100	94.455	ENSONIG00000007474	rtcb	100	94.455	Oreochromis_niloticus
ENSMODG00000001414	RTCB	100	99.208	ENSOANG00000005524	RTCB	100	99.208	Ornithorhynchus_anatinus
ENSMODG00000001414	RTCB	93	97.872	ENSOCUG00000008270	RTCB	96	97.872	Oryctolagus_cuniculus
ENSMODG00000001414	RTCB	100	94.257	ENSORLG00000020093	rtcb	100	94.257	Oryzias_latipes
ENSMODG00000001414	RTCB	100	94.257	ENSORLG00020003706	rtcb	100	94.257	Oryzias_latipes_hni
ENSMODG00000001414	RTCB	100	94.455	ENSORLG00015002968	rtcb	100	94.455	Oryzias_latipes_hsok
ENSMODG00000001414	RTCB	100	93.861	ENSOMEG00000021278	rtcb	100	93.861	Oryzias_melastigma
ENSMODG00000001414	RTCB	100	97.624	ENSOGAG00000001425	RTCB	100	97.624	Otolemur_garnettii
ENSMODG00000001414	RTCB	100	98.416	ENSOARG00000018008	RTCB	100	98.416	Ovis_aries
ENSMODG00000001414	RTCB	100	98.416	ENSPPAG00000028667	RTCB	100	98.416	Pan_paniscus
ENSMODG00000001414	RTCB	100	98.416	ENSPPRG00000004038	RTCB	100	98.416	Panthera_pardus
ENSMODG00000001414	RTCB	94	95.368	ENSPTIG00000020499	RTCB	97	95.368	Panthera_tigris_altaica
ENSMODG00000001414	RTCB	100	98.416	ENSPTRG00000014287	RTCB	100	98.416	Pan_troglodytes
ENSMODG00000001414	RTCB	100	98.020	ENSPANG00000016035	RTCB	100	98.020	Papio_anubis
ENSMODG00000001414	RTCB	100	93.663	ENSPKIG00000001881	rtcb	100	93.663	Paramormyrops_kingsleyae
ENSMODG00000001414	RTCB	91	98.478	ENSPSIG00000011690	RTCB	100	98.478	Pelodiscus_sinensis
ENSMODG00000001414	RTCB	100	94.851	ENSPMGG00000016672	rtcb	100	94.851	Periophthalmus_magnuspinnatus
ENSMODG00000001414	RTCB	100	98.218	ENSPEMG00000019548	Rtcb	100	98.218	Peromyscus_maniculatus_bairdii
ENSMODG00000001414	RTCB	100	90.891	ENSPMAG00000005657	rtcb	100	90.891	Petromyzon_marinus
ENSMODG00000001414	RTCB	100	99.604	ENSPCIG00000009467	RTCB	100	99.604	Phascolarctos_cinereus
ENSMODG00000001414	RTCB	100	94.653	ENSPFOG00000003058	rtcb	100	94.653	Poecilia_formosa
ENSMODG00000001414	RTCB	100	94.455	ENSPLAG00000017663	rtcb	100	94.455	Poecilia_latipinna
ENSMODG00000001414	RTCB	100	94.653	ENSPMEG00000006227	rtcb	100	94.653	Poecilia_mexicana
ENSMODG00000001414	RTCB	100	94.257	ENSPREG00000018467	rtcb	100	94.257	Poecilia_reticulata
ENSMODG00000001414	RTCB	100	98.416	ENSPPYG00000011752	RTCB	100	98.416	Pongo_abelii
ENSMODG00000001414	RTCB	93	80.508	ENSPCAG00000013641	RTCB	100	80.508	Procavia_capensis
ENSMODG00000001414	RTCB	100	98.218	ENSPCOG00000017243	RTCB	100	98.218	Propithecus_coquereli
ENSMODG00000001414	RTCB	93	97.234	ENSPVAG00000002380	RTCB	100	97.234	Pteropus_vampyrus
ENSMODG00000001414	RTCB	100	93.267	ENSPNYG00000022760	rtcb	100	93.267	Pundamilia_nyererei
ENSMODG00000001414	RTCB	100	95.248	ENSPNAG00000009209	rtcb	100	95.248	Pygocentrus_nattereri
ENSMODG00000001414	RTCB	100	98.218	ENSRNOG00000004813	Rtcb	100	98.218	Rattus_norvegicus
ENSMODG00000001414	RTCB	100	89.328	ENSRBIG00000042090	RTCB	100	89.328	Rhinopithecus_bieti
ENSMODG00000001414	RTCB	100	93.267	ENSSBOG00000020085	-	100	93.267	Saimiri_boliviensis_boliviensis
ENSMODG00000001414	RTCB	94	99.367	ENSSHAG00000016277	RTCB	100	99.367	Sarcophilus_harrisii
ENSMODG00000001414	RTCB	100	92.871	ENSSFOG00015000763	rtcb	100	92.871	Scleropages_formosus
ENSMODG00000001414	RTCB	100	94.455	ENSSFOG00015011572	RTCB	100	94.455	Scleropages_formosus
ENSMODG00000001414	RTCB	100	91.089	ENSSMAG00000005096	rtcb	100	91.089	Scophthalmus_maximus
ENSMODG00000001414	RTCB	100	94.059	ENSSDUG00000012605	rtcb	100	94.059	Seriola_dumerili
ENSMODG00000001414	RTCB	100	94.059	ENSSLDG00000019458	rtcb	100	94.059	Seriola_lalandi_dorsalis
ENSMODG00000001414	RTCB	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSMODG00000001414	RTCB	100	96.832	ENSSPUG00000012814	RTCB	100	96.832	Sphenodon_punctatus
ENSMODG00000001414	RTCB	100	94.653	ENSSPAG00000004623	rtcb	100	94.653	Stegastes_partitus
ENSMODG00000001414	RTCB	100	98.416	ENSSSCG00000000158	RTCB	100	98.416	Sus_scrofa
ENSMODG00000001414	RTCB	100	98.218	ENSTGUG00000010947	RTCB	99	98.218	Taeniopygia_guttata
ENSMODG00000001414	RTCB	91	95.217	ENSTRUG00000009880	rtcb	100	95.217	Takifugu_rubripes
ENSMODG00000001414	RTCB	100	93.465	ENSTNIG00000002484	rtcb	100	93.465	Tetraodon_nigroviridis
ENSMODG00000001414	RTCB	100	85.149	ENSTBEG00000004418	RTCB	100	85.149	Tupaia_belangeri
ENSMODG00000001414	RTCB	93	97.234	ENSTTRG00000006417	RTCB	100	97.234	Tursiops_truncatus
ENSMODG00000001414	RTCB	100	98.218	ENSUAMG00000022792	RTCB	100	98.218	Ursus_americanus
ENSMODG00000001414	RTCB	100	98.218	ENSUMAG00000017225	RTCB	100	98.218	Ursus_maritimus
ENSMODG00000001414	RTCB	100	98.218	ENSVPAG00000005375	RTCB	100	98.218	Vicugna_pacos
ENSMODG00000001414	RTCB	100	98.218	ENSVVUG00000023408	RTCB	100	98.771	Vulpes_vulpes
ENSMODG00000001414	RTCB	100	96.040	ENSXETG00000011523	rtcb	100	96.040	Xenopus_tropicalis
ENSMODG00000001414	RTCB	100	94.257	ENSXMAG00000002855	rtcb	100	94.257	Xiphophorus_maculatus