EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000001436 (Gene tree)
Gene ID: 100011364
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 33141 bases
Position: chr3:44999966-45033106
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000001738	TUDOR	PF00567.24	3.3e-05	1	1
ENSMODP00000001738	SMN	PF06003.12	9.7e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000001774	-	2469	-	ENSMODP00000001738	287 (aa)	-	F7BCE9

Gene Model

Click here to download ENSMODG00000001436's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000001436's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000001436	-	95	69.014	ENSG00000205571	SMN2	87	83.333	Homo_sapiens
ENSMODG00000001436	-	95	69.014	ENSG00000172062	SMN1	87	83.333	Homo_sapiens
ENSMODG00000001436	-	92	47.143	ENSAPOG00000011324	smn1	94	55.515	Acanthochromis_polyacanthus
ENSMODG00000001436	-	96	71.831	ENSAMEG00000003316	-	97	70.169	Ailuropoda_melanoleuca
ENSMODG00000001436	-	88	51.341	ENSACIG00000019772	-	97	51.527	Amphilophus_citrinellus
ENSMODG00000001436	-	92	49.442	ENSAOCG00000024444	smn1	94	55.147	Amphiprion_ocellaris
ENSMODG00000001436	-	92	51.852	ENSAPEG00000016504	smn1	94	55.515	Amphiprion_percula
ENSMODG00000001436	-	90	50.923	ENSATEG00000002182	smn1	80	53.704	Anabas_testudineus
ENSMODG00000001436	-	67	63.000	ENSAPLG00000010912	-	97	63.776	Anas_platyrhynchos
ENSMODG00000001436	-	94	66.426	ENSACAG00000010017	-	95	64.234	Anolis_carolinensis
ENSMODG00000001436	-	99	68.013	ENSANAG00000032133	-	99	67.568	Aotus_nancymaae
ENSMODG00000001436	-	92	49.635	ENSACLG00000007308	smn1	90	53.676	Astatotilapia_calliptera
ENSMODG00000001436	-	95	69.039	ENSBTAG00000005743	SMN2	100	68.276	Bos_taurus
ENSMODG00000001436	-	95	69.825	ENSCJAG00000016290	-	87	85.000	Callithrix_jacchus
ENSMODG00000001436	-	95	72.340	ENSCAFG00000007812	SMN	98	70.979	Canis_familiaris
ENSMODG00000001436	-	95	72.242	ENSCAFG00020019229	-	91	70.877	Canis_lupus_dingo
ENSMODG00000001436	-	95	68.551	ENSCHIG00000015559	-	97	68.403	Capra_hircus
ENSMODG00000001436	-	98	69.550	ENSTSYG00000012058	-	99	68.421	Carlito_syrichta
ENSMODG00000001436	-	70	57.561	ENSCAPG00000011021	-	83	52.941	Cavia_aperea
ENSMODG00000001436	-	97	65.854	ENSCPOG00000036973	-	97	65.035	Cavia_porcellus
ENSMODG00000001436	-	97	65.636	ENSCPOG00000012328	-	98	65.292	Cavia_porcellus
ENSMODG00000001436	-	95	69.258	ENSCCAG00000018127	-	96	68.421	Cebus_capucinus
ENSMODG00000001436	-	95	69.366	ENSCATG00000037002	-	85	83.333	Cercocebus_atys
ENSMODG00000001436	-	97	65.517	ENSCLAG00000000284	-	97	65.517	Chinchilla_lanigera
ENSMODG00000001436	-	95	69.366	ENSCSAG00000015688	-	96	68.881	Chlorocebus_sabaeus
ENSMODG00000001436	-	85	64.173	ENSCHOG00000007346	-	76	91.667	Choloepus_hoffmanni
ENSMODG00000001436	-	97	71.631	ENSCPBG00000010968	-	96	71.984	Chrysemys_picta_bellii
ENSMODG00000001436	-	92	64.000	ENSCANG00000033324	-	92	64.364	Colobus_angolensis_palliatus
ENSMODG00000001436	-	95	70.213	ENSCANG00000038242	-	85	83.333	Colobus_angolensis_palliatus
ENSMODG00000001436	-	98	50.694	ENSCGRG00001016998	-	99	51.220	Cricetulus_griseus_chok1gshd
ENSMODG00000001436	-	97	65.734	ENSCGRG00001017959	-	100	65.068	Cricetulus_griseus_chok1gshd
ENSMODG00000001436	-	97	65.734	ENSCGRG00000007698	Smn1	100	65.068	Cricetulus_griseus_crigri
ENSMODG00000001436	-	91	49.638	ENSCSEG00000015227	smn1	96	49.474	Cynoglossus_semilaevis
ENSMODG00000001436	-	57	55.758	ENSCVAG00000007498	smn1	94	49.296	Cyprinodon_variegatus
ENSMODG00000001436	-	92	54.745	ENSDARG00000018494	smn1	95	56.089	Danio_rerio
ENSMODG00000001436	-	82	68.595	ENSDNOG00000007283	-	99	67.220	Dasypus_novemcinctus
ENSMODG00000001436	-	78	55.652	ENSDNOG00000045949	-	97	55.217	Dasypus_novemcinctus
ENSMODG00000001436	-	96	62.191	ENSDORG00000007082	Smn1	97	61.404	Dipodomys_ordii
ENSMODG00000001436	-	66	60.847	ENSETEG00000001406	-	90	60.847	Echinops_telfairi
ENSMODG00000001436	-	89	40.339	ENSEBUG00000011902	smn1	93	39.777	Eptatretus_burgeri
ENSMODG00000001436	-	89	65.660	ENSEASG00005018000	-	96	63.406	Equus_asinus_asinus
ENSMODG00000001436	-	95	71.025	ENSECAG00000015215	-	98	70.383	Equus_caballus
ENSMODG00000001436	-	85	67.460	ENSEEUG00000015777	-	100	66.135	Erinaceus_europaeus
ENSMODG00000001436	-	93	56.522	ENSELUG00000018067	smn1	96	52.899	Esox_lucius
ENSMODG00000001436	-	99	69.521	ENSFCAG00000028292	SMN	89	82.540	Felis_catus
ENSMODG00000001436	-	90	70.076	ENSFALG00000012320	-	94	64.773	Ficedula_albicollis
ENSMODG00000001436	-	97	67.698	ENSFDAG00000017683	-	97	67.241	Fukomys_damarensis
ENSMODG00000001436	-	91	52.747	ENSFHEG00000018508	smn1	97	53.986	Fundulus_heteroclitus
ENSMODG00000001436	-	95	52.174	ENSGMOG00000017279	smn1	95	54.945	Gadus_morhua
ENSMODG00000001436	-	92	69.811	ENSGALG00000002430	SMN	95	65.556	Gallus_gallus
ENSMODG00000001436	-	95	53.521	ENSGAFG00000009501	smn1	97	51.379	Gambusia_affinis
ENSMODG00000001436	-	92	51.331	ENSGACG00000010584	smn1	91	55.597	Gasterosteus_aculeatus
ENSMODG00000001436	-	97	71.071	ENSGAGG00000011374	-	97	70.000	Gopherus_agassizii
ENSMODG00000001436	-	63	42.342	ENSGAGG00000013639	-	90	40.104	Gopherus_agassizii
ENSMODG00000001436	-	91	63.878	ENSGGOG00000003872	-	97	61.887	Gorilla_gorilla
ENSMODG00000001436	-	64	68.984	ENSGGOG00000026704	-	87	67.725	Gorilla_gorilla
ENSMODG00000001436	-	95	50.352	ENSHBUG00000013987	smn1	97	54.448	Haplochromis_burtoni
ENSMODG00000001436	-	97	66.207	ENSHGLG00000001018	-	97	65.398	Heterocephalus_glaber_female
ENSMODG00000001436	-	98	63.763	ENSHGLG00000001905	-	100	63.763	Heterocephalus_glaber_female
ENSMODG00000001436	-	93	63.370	ENSHGLG00100018676	-	100	62.774	Heterocephalus_glaber_male
ENSMODG00000001436	-	97	66.207	ENSHGLG00100011252	-	97	65.398	Heterocephalus_glaber_male
ENSMODG00000001436	-	89	47.955	ENSHCOG00000017136	smn1	87	49.632	Hippocampus_comes
ENSMODG00000001436	-	91	52.239	ENSIPUG00000012580	smn1	83	50.725	Ictalurus_punctatus
ENSMODG00000001436	-	90	69.925	ENSSTOG00000012288	-	100	64.388	Ictidomys_tridecemlineatus
ENSMODG00000001436	-	61	57.714	ENSJJAG00000014853	-	89	57.386	Jaculus_jaculus
ENSMODG00000001436	-	92	49.458	ENSKMAG00000007239	smn1	96	51.111	Kryptolebias_marmoratus
ENSMODG00000001436	-	92	55.435	ENSLBEG00000022550	smn1	94	52.857	Labrus_bergylta
ENSMODG00000001436	-	92	38.628	ENSLACG00000009808	-	94	36.824	Latimeria_chalumnae
ENSMODG00000001436	-	91	52.555	ENSLOCG00000011339	smn1	94	53.480	Lepisosteus_oculatus
ENSMODG00000001436	-	99	70.508	ENSLAFG00000003425	-	97	69.728	Loxodonta_africana
ENSMODG00000001436	-	95	69.366	ENSMFAG00000031523	SMN1	85	83.333	Macaca_fascicularis
ENSMODG00000001436	-	95	66.197	ENSMFAG00000008812	-	96	65.385	Macaca_fascicularis
ENSMODG00000001436	-	95	69.366	ENSMMUG00000020214	SMN1	85	83.333	Macaca_mulatta
ENSMODG00000001436	-	95	65.493	ENSMMUG00000030594	-	96	64.685	Macaca_mulatta
ENSMODG00000001436	-	94	69.751	ENSMNEG00000035094	-	84	83.333	Macaca_nemestrina
ENSMODG00000001436	-	73	57.798	ENSMNEG00000036423	-	72	64.674	Macaca_nemestrina
ENSMODG00000001436	-	94	69.395	ENSMLEG00000041902	-	85	81.667	Mandrillus_leucophaeus
ENSMODG00000001436	-	95	50.526	ENSMAMG00000011034	smn1	96	51.408	Mastacembelus_armatus
ENSMODG00000001436	-	95	50.175	ENSMZEG00005013634	smn1	97	54.093	Maylandia_zebra
ENSMODG00000001436	-	67	64.583	ENSMGAG00000008889	-	95	61.929	Meleagris_gallopavo
ENSMODG00000001436	-	99	63.356	ENSMAUG00000010262	Smn1	100	63.356	Mesocricetus_auratus
ENSMODG00000001436	-	77	68.534	ENSMICG00000034708	-	99	68.539	Microcebus_murinus
ENSMODG00000001436	-	97	65.157	ENSMOCG00000017833	Smn1	100	64.505	Microtus_ochrogaster
ENSMODG00000001436	-	92	50.379	ENSMMOG00000005504	smn1	96	50.545	Mola_mola
ENSMODG00000001436	-	91	49.451	ENSMALG00000008025	smn1	94	50.694	Monopterus_albus
ENSMODG00000001436	-	99	63.481	MGP_CAROLIEiJ_G0018836	Smn1	100	64.505	Mus_caroli
ENSMODG00000001436	-	99	63.481	ENSMUSG00000021645	Smn1	100	64.164	Mus_musculus
ENSMODG00000001436	-	99	62.543	MGP_PahariEiJ_G0015911	Smn1	100	62.543	Mus_pahari
ENSMODG00000001436	-	99	63.140	MGP_SPRETEiJ_G0019718	Smn1	100	63.823	Mus_spretus
ENSMODG00000001436	-	93	71.739	ENSMPUG00000014470	-	97	70.545	Mustela_putorius_furo
ENSMODG00000001436	-	96	68.151	ENSMLUG00000010603	-	94	67.347	Myotis_lucifugus
ENSMODG00000001436	-	99	66.894	ENSNGAG00000019833	Smn1	100	66.894	Nannospalax_galili
ENSMODG00000001436	-	95	50.000	ENSNBRG00000023000	smn1	97	54.930	Neolamprologus_brichardi
ENSMODG00000001436	-	97	69.338	ENSNLEG00000004454	-	87	83.333	Nomascus_leucogenys
ENSMODG00000001436	-	77	89.593	ENSMEUG00000011393	-	100	89.593	Notamacropus_eugenii
ENSMODG00000001436	-	85	68.750	ENSOPRG00000002015	-	100	68.235	Ochotona_princeps
ENSMODG00000001436	-	92	67.626	ENSODEG00000015976	-	95	66.912	Octodon_degus
ENSMODG00000001436	-	92	51.254	ENSONIG00000011799	smn1	95	56.364	Oreochromis_niloticus
ENSMODG00000001436	-	98	73.776	ENSOANG00000001626	-	99	74.825	Ornithorhynchus_anatinus
ENSMODG00000001436	-	99	70.979	ENSOCUG00000017097	-	99	70.526	Oryctolagus_cuniculus
ENSMODG00000001436	-	99	60.943	ENSOCUG00000025183	-	100	60.943	Oryctolagus_cuniculus
ENSMODG00000001436	-	99	68.512	ENSOCUG00000026649	-	99	68.621	Oryctolagus_cuniculus
ENSMODG00000001436	-	59	60.588	ENSORLG00000010552	smn1	94	53.480	Oryzias_latipes
ENSMODG00000001436	-	95	52.727	ENSORLG00020007936	smn1	94	50.951	Oryzias_latipes_hni
ENSMODG00000001436	-	59	56.805	ENSORLG00015022425	smn1	94	53.846	Oryzias_latipes_hsok
ENSMODG00000001436	-	51	60.135	ENSOMEG00000007824	smn1	94	54.380	Oryzias_melastigma
ENSMODG00000001436	-	91	63.636	ENSOGAG00000031414	-	95	62.816	Otolemur_garnettii
ENSMODG00000001436	-	94	67.391	ENSOARG00000005425	-	100	67.391	Ovis_aries
ENSMODG00000001436	-	95	69.014	ENSPPAG00000036640	-	87	83.333	Pan_paniscus
ENSMODG00000001436	-	99	69.863	ENSPPRG00000005575	-	90	82.812	Panthera_pardus
ENSMODG00000001436	-	99	69.625	ENSPTIG00000007745	-	90	82.812	Panthera_tigris_altaica
ENSMODG00000001436	-	95	68.293	ENSPTRG00000016955	-	87	83.333	Pan_troglodytes
ENSMODG00000001436	-	95	67.254	ENSPANG00000000253	-	96	66.783	Papio_anubis
ENSMODG00000001436	-	97	69.686	ENSPANG00000013601	-	85	83.333	Papio_anubis
ENSMODG00000001436	-	91	53.585	ENSPKIG00000011096	smn1	94	51.673	Paramormyrops_kingsleyae
ENSMODG00000001436	-	91	67.528	ENSPSIG00000014787	-	91	63.380	Pelodiscus_sinensis
ENSMODG00000001436	-	93	49.821	ENSPMGG00000012285	smn1	94	53.232	Periophthalmus_magnuspinnatus
ENSMODG00000001436	-	89	43.130	ENSPMAG00000005004	smn1	95	39.643	Petromyzon_marinus
ENSMODG00000001436	-	99	96.113	ENSPCIG00000025764	-	100	96.113	Phascolarctos_cinereus
ENSMODG00000001436	-	95	53.873	ENSPFOG00000007786	smn1	97	51.379	Poecilia_formosa
ENSMODG00000001436	-	95	54.225	ENSPLAG00000012071	smn1	94	53.047	Poecilia_latipinna
ENSMODG00000001436	-	95	53.873	ENSPMEG00000017085	smn1	97	51.379	Poecilia_mexicana
ENSMODG00000001436	-	95	54.577	ENSPREG00000005824	smn1	97	52.414	Poecilia_reticulata
ENSMODG00000001436	-	85	45.492	ENSPPYG00000019189	-	99	42.623	Pongo_abelii
ENSMODG00000001436	-	91	68.148	ENSPPYG00000015533	-	96	66.914	Pongo_abelii
ENSMODG00000001436	-	91	69.403	ENSPCAG00000004187	-	100	70.149	Procavia_capensis
ENSMODG00000001436	-	65	66.845	ENSPCOG00000022307	-	100	52.941	Propithecus_coquereli
ENSMODG00000001436	-	95	72.242	ENSPVAG00000005977	-	97	71.228	Pteropus_vampyrus
ENSMODG00000001436	-	95	50.000	ENSPNYG00000014148	smn1	97	54.930	Pundamilia_nyererei
ENSMODG00000001436	-	92	51.661	ENSPNAG00000014007	smn1	82	51.301	Pygocentrus_nattereri
ENSMODG00000001436	-	95	65.125	ENSRNOG00000018067	Smn1	98	64.460	Rattus_norvegicus
ENSMODG00000001436	-	95	69.718	ENSRBIG00000037052	-	85	83.333	Rhinopithecus_bieti
ENSMODG00000001436	-	92	61.940	ENSRBIG00000036775	-	92	58.759	Rhinopithecus_bieti
ENSMODG00000001436	-	95	69.718	ENSRROG00000039399	-	85	83.333	Rhinopithecus_roxellana
ENSMODG00000001436	-	97	60.000	ENSRROG00000031088	-	96	56.993	Rhinopithecus_roxellana
ENSMODG00000001436	-	83	64.822	ENSSBOG00000020112	-	94	60.073	Saimiri_boliviensis_boliviensis
ENSMODG00000001436	-	95	70.107	ENSSBOG00000011665	-	85	83.333	Saimiri_boliviensis_boliviensis
ENSMODG00000001436	-	99	96.140	ENSSHAG00000001499	-	100	93.309	Sarcophilus_harrisii
ENSMODG00000001436	-	92	56.180	ENSSFOG00015015507	smn1	94	56.827	Scleropages_formosus
ENSMODG00000001436	-	95	50.360	ENSSMAG00000007922	smn1	97	51.590	Scophthalmus_maximus
ENSMODG00000001436	-	95	48.097	ENSSDUG00000018533	smn1	96	54.737	Seriola_dumerili
ENSMODG00000001436	-	95	48.443	ENSSLDG00000021135	smn1	94	56.569	Seriola_lalandi_dorsalis
ENSMODG00000001436	-	97	70.251	ENSSPUG00000000373	-	96	67.266	Sphenodon_punctatus
ENSMODG00000001436	-	92	51.698	ENSSPAG00000004345	smn1	94	54.212	Stegastes_partitus
ENSMODG00000001436	-	96	69.611	ENSSSCG00000016970	-	100	69.492	Sus_scrofa
ENSMODG00000001436	-	95	54.015	ENSSSCG00000029127	-	96	54.643	Sus_scrofa
ENSMODG00000001436	-	69	49.751	ENSSSCG00000033865	-	90	51.256	Sus_scrofa
ENSMODG00000001436	-	93	63.345	ENSTGUG00000001548	-	99	60.702	Taeniopygia_guttata
ENSMODG00000001436	-	92	48.540	ENSTRUG00000000736	smn	96	46.316	Takifugu_rubripes
ENSMODG00000001436	-	92	46.071	ENSTNIG00000009892	smn1	95	51.613	Tetraodon_nigroviridis
ENSMODG00000001436	-	64	71.277	ENSTBEG00000002399	-	90	70.000	Tupaia_belangeri
ENSMODG00000001436	-	96	71.530	ENSTTRG00000005080	-	100	68.942	Tursiops_truncatus
ENSMODG00000001436	-	64	70.968	ENSUAMG00000024947	-	72	68.528	Ursus_americanus
ENSMODG00000001436	-	96	71.831	ENSUMAG00000007842	-	76	70.169	Ursus_maritimus
ENSMODG00000001436	-	91	60.075	ENSVPAG00000009887	-	97	60.000	Vicugna_pacos
ENSMODG00000001436	-	95	72.340	ENSVVUG00000006934	-	98	70.979	Vulpes_vulpes
ENSMODG00000001436	-	97	58.099	ENSXETG00000018189	smn2	91	59.176	Xenopus_tropicalis
ENSMODG00000001436	-	90	34.783	ENSXETG00000004912	-	81	57.377	Xenopus_tropicalis
ENSMODG00000001436	-	92	56.364	ENSXMAG00000001521	smn1	95	53.025	Xiphophorus_maculatus