EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000001695 (Gene tree)
Gene ID: 100011818
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 43485 bases
Position: chr3:46217612-46261096
Accession: 100011818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000002073	MRP-S27	PF10037.9	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000002116	PTCD2-201	5153	-	ENSMODP00000002073	384 (aa)	XP_007486569	F6S7F6

Gene Model

Click here to download ENSMODG00000001695's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000001695's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000001695	PTCD2	100	57.031	ENSG00000049883	PTCD2	99	57.031	Homo_sapiens
ENSMODG00000001695	PTCD2	100	44.271	ENSAPOG00000020682	ptcd2	99	44.271	Acanthochromis_polyacanthus
ENSMODG00000001695	PTCD2	92	59.207	ENSAMEG00000007194	PTCD2	91	59.207	Ailuropoda_melanoleuca
ENSMODG00000001695	PTCD2	90	43.553	ENSACIG00000002053	ptcd2	100	43.553	Amphilophus_citrinellus
ENSMODG00000001695	PTCD2	100	44.792	ENSAOCG00000006616	ptcd2	98	44.792	Amphiprion_ocellaris
ENSMODG00000001695	PTCD2	100	44.792	ENSAPEG00000022926	ptcd2	98	44.792	Amphiprion_percula
ENSMODG00000001695	PTCD2	98	54.521	ENSACAG00000009747	PTCD2	96	54.521	Anolis_carolinensis
ENSMODG00000001695	PTCD2	100	56.777	ENSANAG00000029353	PTCD2	99	56.777	Aotus_nancymaae
ENSMODG00000001695	PTCD2	100	43.636	ENSACLG00000027742	ptcd2	98	43.636	Astatotilapia_calliptera
ENSMODG00000001695	PTCD2	89	42.486	ENSAMXG00000029404	ptcd2	92	42.486	Astyanax_mexicanus
ENSMODG00000001695	PTCD2	100	56.250	ENSBTAG00000014675	PTCD2	100	56.250	Bos_taurus
ENSMODG00000001695	PTCD2	100	57.031	ENSCJAG00000016364	PTCD2	99	57.031	Callithrix_jacchus
ENSMODG00000001695	PTCD2	100	58.594	ENSCAFG00000007982	PTCD2	90	58.594	Canis_familiaris
ENSMODG00000001695	PTCD2	90	60.983	ENSCAFG00020019147	PTCD2	97	60.983	Canis_lupus_dingo
ENSMODG00000001695	PTCD2	100	56.510	ENSCHIG00000017118	PTCD2	100	56.510	Capra_hircus
ENSMODG00000001695	PTCD2	92	56.941	ENSCPOG00000040168	PTCD2	92	56.941	Cavia_porcellus
ENSMODG00000001695	PTCD2	100	57.031	ENSCCAG00000029389	-	99	57.031	Cebus_capucinus
ENSMODG00000001695	PTCD2	75	59.722	ENSCCAG00000021996	-	88	59.722	Cebus_capucinus
ENSMODG00000001695	PTCD2	100	57.292	ENSCATG00000019069	PTCD2	100	57.292	Cercocebus_atys
ENSMODG00000001695	PTCD2	92	58.640	ENSCLAG00000000072	PTCD2	92	58.640	Chinchilla_lanigera
ENSMODG00000001695	PTCD2	100	58.594	ENSCSAG00000015623	PTCD2	100	58.594	Chlorocebus_sabaeus
ENSMODG00000001695	PTCD2	90	46.839	ENSCHOG00000010634	PTCD2	100	46.839	Choloepus_hoffmanni
ENSMODG00000001695	PTCD2	99	51.958	ENSCPBG00000000216	PTCD2	98	51.958	Chrysemys_picta_bellii
ENSMODG00000001695	PTCD2	100	58.333	ENSCANG00000035636	PTCD2	99	58.333	Colobus_angolensis_palliatus
ENSMODG00000001695	PTCD2	100	54.688	ENSCGRG00001015289	Ptcd2	84	54.688	Cricetulus_griseus_chok1gshd
ENSMODG00000001695	PTCD2	100	54.688	ENSCGRG00000006193	Ptcd2	84	54.688	Cricetulus_griseus_crigri
ENSMODG00000001695	PTCD2	97	46.859	ENSCVAG00000001285	ptcd2	98	46.859	Cyprinodon_variegatus
ENSMODG00000001695	PTCD2	97	46.933	ENSDARG00000035391	ptcd2	97	46.933	Danio_rerio
ENSMODG00000001695	PTCD2	100	58.333	ENSDNOG00000008719	PTCD2	100	58.333	Dasypus_novemcinctus
ENSMODG00000001695	PTCD2	100	56.701	ENSDORG00000004921	Ptcd2	100	56.701	Dipodomys_ordii
ENSMODG00000001695	PTCD2	100	53.109	ENSETEG00000016542	PTCD2	99	53.109	Echinops_telfairi
ENSMODG00000001695	PTCD2	92	60.169	ENSEASG00005018038	PTCD2	93	60.169	Equus_asinus_asinus
ENSMODG00000001695	PTCD2	96	59.128	ENSECAG00000007022	PTCD2	95	59.128	Equus_caballus
ENSMODG00000001695	PTCD2	92	58.287	ENSEEUG00000014031	PTCD2	94	58.287	Erinaceus_europaeus
ENSMODG00000001695	PTCD2	92	47.042	ENSELUG00000003584	ptcd2	92	47.042	Esox_lucius
ENSMODG00000001695	PTCD2	82	59.744	ENSFCAG00000045432	PTCD2	73	59.744	Felis_catus
ENSMODG00000001695	PTCD2	85	50.459	ENSFALG00000010299	PTCD2	99	50.459	Ficedula_albicollis
ENSMODG00000001695	PTCD2	92	60.563	ENSFDAG00000018461	PTCD2	93	60.563	Fukomys_damarensis
ENSMODG00000001695	PTCD2	91	46.591	ENSGMOG00000003637	ptcd2	91	46.591	Gadus_morhua
ENSMODG00000001695	PTCD2	93	50.980	ENSGALG00000038260	PTCD2	99	49.608	Gallus_gallus
ENSMODG00000001695	PTCD2	98	57.181	ENSGAGG00000021952	PTCD2	96	57.181	Gopherus_agassizii
ENSMODG00000001695	PTCD2	100	57.031	ENSGGOG00000010695	PTCD2	99	57.031	Gorilla_gorilla
ENSMODG00000001695	PTCD2	100	43.377	ENSHBUG00000009191	ptcd2	98	43.377	Haplochromis_burtoni
ENSMODG00000001695	PTCD2	93	58.380	ENSHGLG00000001234	PTCD2	93	58.380	Heterocephalus_glaber_female
ENSMODG00000001695	PTCD2	93	58.380	ENSHGLG00100015419	PTCD2	93	58.380	Heterocephalus_glaber_male
ENSMODG00000001695	PTCD2	92	46.910	ENSHCOG00000001703	ptcd2	92	46.910	Hippocampus_comes
ENSMODG00000001695	PTCD2	87	46.246	ENSIPUG00000006080	ptcd2	91	46.875	Ictalurus_punctatus
ENSMODG00000001695	PTCD2	96	56.349	ENSSTOG00000006596	PTCD2	99	56.349	Ictidomys_tridecemlineatus
ENSMODG00000001695	PTCD2	100	58.333	ENSJJAG00000024388	Ptcd2	100	58.333	Jaculus_jaculus
ENSMODG00000001695	PTCD2	91	44.444	ENSKMAG00000009329	ptcd2	92	44.444	Kryptolebias_marmoratus
ENSMODG00000001695	PTCD2	91	45.892	ENSLBEG00000024871	ptcd2	90	45.892	Labrus_bergylta
ENSMODG00000001695	PTCD2	92	52.260	ENSLOCG00000011122	ptcd2	92	52.260	Lepisosteus_oculatus
ENSMODG00000001695	PTCD2	81	61.538	ENSLAFG00000004115	PTCD2	100	61.538	Loxodonta_africana
ENSMODG00000001695	PTCD2	100	57.812	ENSMFAG00000031516	PTCD2	99	57.812	Macaca_fascicularis
ENSMODG00000001695	PTCD2	100	58.073	ENSMNEG00000007537	PTCD2	100	58.073	Macaca_nemestrina
ENSMODG00000001695	PTCD2	100	57.552	ENSMLEG00000031093	PTCD2	99	57.552	Mandrillus_leucophaeus
ENSMODG00000001695	PTCD2	96	47.425	ENSMAMG00000018529	ptcd2	97	47.425	Mastacembelus_armatus
ENSMODG00000001695	PTCD2	100	43.636	ENSMZEG00005003625	ptcd2	98	43.636	Maylandia_zebra
ENSMODG00000001695	PTCD2	91	51.724	ENSMGAG00000005033	PTCD2	100	51.724	Meleagris_gallopavo
ENSMODG00000001695	PTCD2	93	44.231	ENSMAUG00000020253	Ptcd2	95	44.231	Mesocricetus_auratus
ENSMODG00000001695	PTCD2	95	59.043	ENSMICG00000004535	PTCD2	97	59.043	Microcebus_murinus
ENSMODG00000001695	PTCD2	92	56.497	ENSMOCG00000019985	Ptcd2	93	56.497	Microtus_ochrogaster
ENSMODG00000001695	PTCD2	92	49.153	ENSMALG00000022372	ptcd2	92	49.153	Monopterus_albus
ENSMODG00000001695	PTCD2	100	54.145	MGP_CAROLIEiJ_G0018829	Ptcd2	100	54.145	Mus_caroli
ENSMODG00000001695	PTCD2	100	53.886	ENSMUSG00000021650	Ptcd2	100	53.886	Mus_musculus
ENSMODG00000001695	PTCD2	92	57.910	MGP_PahariEiJ_G0015904	Ptcd2	93	57.910	Mus_pahari
ENSMODG00000001695	PTCD2	100	54.404	MGP_SPRETEiJ_G0019711	Ptcd2	100	54.404	Mus_spretus
ENSMODG00000001695	PTCD2	100	58.073	ENSMPUG00000014401	PTCD2	100	58.073	Mustela_putorius_furo
ENSMODG00000001695	PTCD2	91	59.829	ENSMLUG00000007374	PTCD2	99	56.771	Myotis_lucifugus
ENSMODG00000001695	PTCD2	100	52.850	ENSNGAG00000005027	Ptcd2	100	52.850	Nannospalax_galili
ENSMODG00000001695	PTCD2	100	43.896	ENSNBRG00000008174	ptcd2	99	43.896	Neolamprologus_brichardi
ENSMODG00000001695	PTCD2	86	45.015	ENSNBRG00000000092	-	100	45.015	Neolamprologus_brichardi
ENSMODG00000001695	PTCD2	100	57.552	ENSNLEG00000004516	PTCD2	99	57.552	Nomascus_leucogenys
ENSMODG00000001695	PTCD2	100	59.635	ENSMEUG00000014012	-	99	59.635	Notamacropus_eugenii
ENSMODG00000001695	PTCD2	96	53.989	ENSOPRG00000007290	PTCD2	97	53.989	Ochotona_princeps
ENSMODG00000001695	PTCD2	93	59.270	ENSODEG00000016417	PTCD2	93	59.270	Octodon_degus
ENSMODG00000001695	PTCD2	84	45.062	ENSONIG00000011269	ptcd2	94	45.062	Oreochromis_niloticus
ENSMODG00000001695	PTCD2	93	58.989	ENSOCUG00000007970	PTCD2	100	57.031	Oryctolagus_cuniculus
ENSMODG00000001695	PTCD2	92	44.225	ENSORLG00000003851	ptcd2	91	44.225	Oryzias_latipes
ENSMODG00000001695	PTCD2	92	43.662	ENSORLG00020009823	ptcd2	92	43.662	Oryzias_latipes_hni
ENSMODG00000001695	PTCD2	90	44.413	ENSORLG00015016777	ptcd2	99	44.413	Oryzias_latipes_hsok
ENSMODG00000001695	PTCD2	99	43.421	ENSOMEG00000012396	ptcd2	91	43.421	Oryzias_melastigma
ENSMODG00000001695	PTCD2	92	60.623	ENSOGAG00000008390	PTCD2	91	60.623	Otolemur_garnettii
ENSMODG00000001695	PTCD2	100	55.729	ENSOARG00000005087	PTCD2	99	55.729	Ovis_aries
ENSMODG00000001695	PTCD2	100	57.031	ENSPPAG00000028480	PTCD2	99	57.031	Pan_paniscus
ENSMODG00000001695	PTCD2	100	57.031	ENSPTRG00000016968	PTCD2	99	57.031	Pan_troglodytes
ENSMODG00000001695	PTCD2	90	60.580	ENSPANG00000006611	PTCD2	89	60.580	Papio_anubis
ENSMODG00000001695	PTCD2	92	48.023	ENSPKIG00000019896	ptcd2	92	48.023	Paramormyrops_kingsleyae
ENSMODG00000001695	PTCD2	82	60.317	ENSPSIG00000014559	PTCD2	98	60.317	Pelodiscus_sinensis
ENSMODG00000001695	PTCD2	92	58.146	ENSPEMG00000000884	Ptcd2	93	58.146	Peromyscus_maniculatus_bairdii
ENSMODG00000001695	PTCD2	100	78.125	ENSPCIG00000029047	PTCD2	100	78.125	Phascolarctos_cinereus
ENSMODG00000001695	PTCD2	87	48.048	ENSPLAG00000010456	ptcd2	92	47.606	Poecilia_latipinna
ENSMODG00000001695	PTCD2	92	47.753	ENSPREG00000021797	ptcd2	90	47.753	Poecilia_reticulata
ENSMODG00000001695	PTCD2	100	50.521	ENSPPYG00000015543	PTCD2	99	50.521	Pongo_abelii
ENSMODG00000001695	PTCD2	73	53.763	ENSPCAG00000006806	PTCD2	89	53.763	Procavia_capensis
ENSMODG00000001695	PTCD2	100	55.208	ENSPVAG00000010935	PTCD2	99	55.208	Pteropus_vampyrus
ENSMODG00000001695	PTCD2	100	43.377	ENSPNYG00000003122	ptcd2	98	43.377	Pundamilia_nyererei
ENSMODG00000001695	PTCD2	98	49.606	ENSPNAG00000021490	ptcd2	98	49.606	Pygocentrus_nattereri
ENSMODG00000001695	PTCD2	92	58.192	ENSRNOG00000028403	Ptcd2	93	58.192	Rattus_norvegicus
ENSMODG00000001695	PTCD2	100	53.646	ENSRBIG00000032929	PTCD2	99	53.646	Rhinopithecus_bieti
ENSMODG00000001695	PTCD2	100	58.333	ENSRROG00000000080	PTCD2	100	58.333	Rhinopithecus_roxellana
ENSMODG00000001695	PTCD2	100	55.990	ENSSBOG00000018911	PTCD2	100	55.990	Saimiri_boliviensis_boliviensis
ENSMODG00000001695	PTCD2	100	77.083	ENSSHAG00000003833	PTCD2	99	77.083	Sarcophilus_harrisii
ENSMODG00000001695	PTCD2	92	47.025	ENSSFOG00015015415	ptcd2	91	47.025	Scleropages_formosus
ENSMODG00000001695	PTCD2	95	46.978	ENSSMAG00000010350	ptcd2	95	46.978	Scophthalmus_maximus
ENSMODG00000001695	PTCD2	93	46.779	ENSSDUG00000008142	ptcd2	89	46.779	Seriola_dumerili
ENSMODG00000001695	PTCD2	93	46.218	ENSSLDG00000015284	ptcd2	93	46.218	Seriola_lalandi_dorsalis
ENSMODG00000001695	PTCD2	81	52.258	ENSSARG00000004983	PTCD2	99	52.258	Sorex_araneus
ENSMODG00000001695	PTCD2	99	50.653	ENSSPUG00000000176	PTCD2	95	50.653	Sphenodon_punctatus
ENSMODG00000001695	PTCD2	92	45.070	ENSSPAG00000008591	ptcd2	91	45.070	Stegastes_partitus
ENSMODG00000001695	PTCD2	100	57.812	ENSSSCG00000016975	PTCD2	90	57.812	Sus_scrofa
ENSMODG00000001695	PTCD2	90	52.174	ENSTGUG00000005705	PTCD2	99	52.174	Taeniopygia_guttata
ENSMODG00000001695	PTCD2	92	57.507	ENSTBEG00000016559	PTCD2	91	57.507	Tupaia_belangeri
ENSMODG00000001695	PTCD2	96	58.311	ENSTTRG00000011851	PTCD2	94	58.311	Tursiops_truncatus
ENSMODG00000001695	PTCD2	100	56.995	ENSUAMG00000007583	PTCD2	90	56.995	Ursus_americanus
ENSMODG00000001695	PTCD2	100	56.010	ENSUMAG00000007666	PTCD2	100	56.010	Ursus_maritimus
ENSMODG00000001695	PTCD2	100	55.469	ENSVPAG00000009597	PTCD2	99	55.469	Vicugna_pacos
ENSMODG00000001695	PTCD2	100	58.594	ENSVVUG00000007299	-	100	58.594	Vulpes_vulpes
ENSMODG00000001695	PTCD2	91	53.429	ENSXETG00000031652	PTCD2	92	53.429	Xenopus_tropicalis
ENSMODG00000001695	PTCD2	87	47.605	ENSXMAG00000005940	ptcd2	84	47.472	Xiphophorus_maculatus