EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000001785 (Gene tree)
Gene ID: 100031123
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 265015 bases
Position: chr2:239902177-240167191
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000032086	Ago_hook	PF10427.9	8.9e-20	1	1
ENSMODP00000032086	RRM_1	PF00076.22	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000033662	TNRC6C-201	9103	-	ENSMODP00000032086	1896 (aa)	-	F7FMK0

Gene Model

Click here to download ENSMODG00000001785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000001785's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000001785	TNRC6C	99	43.567	ENSMODG00000016348	TNRC6A	96	43.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000001785	TNRC6C	99	85.395	ENSG00000078687	TNRC6C	100	87.243	Homo_sapiens
ENSMODG00000001785	TNRC6C	71	55.761	ENSAPOG00000019749	tnrc6c1	100	48.932	Acanthochromis_polyacanthus
ENSMODG00000001785	TNRC6C	93	82.027	ENSAMEG00000013756	TNRC6C	100	82.740	Ailuropoda_melanoleuca
ENSMODG00000001785	TNRC6C	93	46.489	ENSACIG00000008075	tnrc6c1	79	53.095	Amphilophus_citrinellus
ENSMODG00000001785	TNRC6C	67	69.280	ENSAOCG00000023968	tnrc6c1	100	49.142	Amphiprion_ocellaris
ENSMODG00000001785	TNRC6C	71	55.187	ENSAPEG00000009020	tnrc6c1	99	50.292	Amphiprion_percula
ENSMODG00000001785	TNRC6C	99	84.969	ENSAPLG00000005456	TNRC6C	100	85.434	Anas_platyrhynchos
ENSMODG00000001785	TNRC6C	99	84.501	ENSACAG00000016198	TNRC6C	98	85.692	Anolis_carolinensis
ENSMODG00000001785	TNRC6C	99	85.120	ENSANAG00000021554	TNRC6C	100	86.816	Aotus_nancymaae
ENSMODG00000001785	TNRC6C	93	46.966	ENSACLG00000000424	tnrc6c1	99	47.632	Astatotilapia_calliptera
ENSMODG00000001785	TNRC6C	96	84.598	ENSBTAG00000018658	TNRC6C	100	83.637	Bos_taurus
ENSMODG00000001785	TNRC6C	99	84.919	ENSCJAG00000019431	TNRC6C	100	86.647	Callithrix_jacchus
ENSMODG00000001785	TNRC6C	99	84.347	ENSCAFG00000005224	TNRC6C	99	84.555	Canis_familiaris
ENSMODG00000001785	TNRC6C	99	85.950	ENSCAFG00020006661	TNRC6C	100	85.798	Canis_lupus_dingo
ENSMODG00000001785	TNRC6C	99	81.896	ENSCHIG00000026004	TNRC6C	100	82.273	Capra_hircus
ENSMODG00000001785	TNRC6C	89	85.303	ENSTSYG00000005403	TNRC6C	100	85.648	Carlito_syrichta
ENSMODG00000001785	TNRC6C	98	79.200	ENSCAPG00000007307	TNRC6C	99	79.647	Cavia_aperea
ENSMODG00000001785	TNRC6C	99	83.431	ENSCPOG00000000467	TNRC6C	100	84.364	Cavia_porcellus
ENSMODG00000001785	TNRC6C	99	85.231	ENSCCAG00000030524	TNRC6C	100	87.176	Cebus_capucinus
ENSMODG00000001785	TNRC6C	99	85.231	ENSCATG00000033135	TNRC6C	100	87.118	Cercocebus_atys
ENSMODG00000001785	TNRC6C	99	84.987	ENSCLAG00000011139	TNRC6C	99	85.289	Chinchilla_lanigera
ENSMODG00000001785	TNRC6C	99	84.815	ENSCSAG00000005167	TNRC6C	99	85.127	Chlorocebus_sabaeus
ENSMODG00000001785	TNRC6C	70	87.717	ENSCHOG00000000088	TNRC6C	75	87.758	Choloepus_hoffmanni
ENSMODG00000001785	TNRC6C	92	88.499	ENSCPBG00000027960	TNRC6C	100	89.353	Chrysemys_picta_bellii
ENSMODG00000001785	TNRC6C	99	84.867	ENSCANG00000041771	TNRC6C	100	86.765	Colobus_angolensis_palliatus
ENSMODG00000001785	TNRC6C	99	83.484	ENSCGRG00001022686	Tnrc6c	100	84.198	Cricetulus_griseus_chok1gshd
ENSMODG00000001785	TNRC6C	99	83.484	ENSCGRG00000018041	Tnrc6c	100	84.198	Cricetulus_griseus_crigri
ENSMODG00000001785	TNRC6C	61	38.389	ENSCSEG00000012744	tnrc6c1	98	47.020	Cynoglossus_semilaevis
ENSMODG00000001785	TNRC6C	99	51.978	ENSDARG00000076847	tnrc6c1	96	56.067	Danio_rerio
ENSMODG00000001785	TNRC6C	99	82.909	ENSDNOG00000003247	TNRC6C	99	83.221	Dasypus_novemcinctus
ENSMODG00000001785	TNRC6C	98	81.203	ENSDORG00000004558	Tnrc6c	100	82.734	Dipodomys_ordii
ENSMODG00000001785	TNRC6C	82	78.720	ENSETEG00000005527	TNRC6C	90	78.979	Echinops_telfairi
ENSMODG00000001785	TNRC6C	89	85.554	ENSEASG00005004799	TNRC6C	100	86.262	Equus_asinus_asinus
ENSMODG00000001785	TNRC6C	99	85.037	ENSECAG00000012486	TNRC6C	99	85.676	Equus_caballus
ENSMODG00000001785	TNRC6C	88	84.680	ENSEEUG00000010008	TNRC6C	96	85.017	Erinaceus_europaeus
ENSMODG00000001785	TNRC6C	99	81.662	ENSFCAG00000028358	TNRC6C	100	84.254	Felis_catus
ENSMODG00000001785	TNRC6C	89	84.320	ENSFALG00000000848	TNRC6C	100	84.997	Ficedula_albicollis
ENSMODG00000001785	TNRC6C	92	84.937	ENSFDAG00000010368	TNRC6C	100	85.567	Fukomys_damarensis
ENSMODG00000001785	TNRC6C	96	46.238	ENSFHEG00000002936	tnrc6c1	99	46.416	Fundulus_heteroclitus
ENSMODG00000001785	TNRC6C	93	85.927	ENSGALG00000001725	TNRC6C	100	88.745	Gallus_gallus
ENSMODG00000001785	TNRC6C	99	47.967	ENSGAFG00000019019	tnrc6c1	99	48.849	Gambusia_affinis
ENSMODG00000001785	TNRC6C	71	54.623	ENSGACG00000012320	tnrc6c1	97	49.175	Gasterosteus_aculeatus
ENSMODG00000001785	TNRC6C	92	88.222	ENSGAGG00000022043	TNRC6C	99	88.689	Gopherus_agassizii
ENSMODG00000001785	TNRC6C	99	84.615	ENSGGOG00000011304	TNRC6C	100	86.302	Gorilla_gorilla
ENSMODG00000001785	TNRC6C	97	51.436	ENSHBUG00000010846	tnrc6c1	99	47.909	Haplochromis_burtoni
ENSMODG00000001785	TNRC6C	99	85.085	ENSHGLG00000004809	TNRC6C	99	85.403	Heterocephalus_glaber_female
ENSMODG00000001785	TNRC6C	99	85.191	ENSHGLG00100012597	TNRC6C	99	85.722	Heterocephalus_glaber_male
ENSMODG00000001785	TNRC6C	99	52.148	ENSIPUG00000000818	tnrc6c1	98	53.299	Ictalurus_punctatus
ENSMODG00000001785	TNRC6C	99	84.889	ENSSTOG00000009101	TNRC6C	100	85.249	Ictidomys_tridecemlineatus
ENSMODG00000001785	TNRC6C	99	82.440	ENSJJAG00000017055	Tnrc6c	99	82.599	Jaculus_jaculus
ENSMODG00000001785	TNRC6C	71	54.290	ENSKMAG00000021023	tnrc6c1	97	51.474	Kryptolebias_marmoratus
ENSMODG00000001785	TNRC6C	92	75.850	ENSLACG00000015283	TNRC6C	100	76.134	Latimeria_chalumnae
ENSMODG00000001785	TNRC6C	99	56.188	ENSLOCG00000013377	tnrc6c1	99	56.773	Lepisosteus_oculatus
ENSMODG00000001785	TNRC6C	99	85.684	ENSLAFG00000011122	TNRC6C	99	86.352	Loxodonta_africana
ENSMODG00000001785	TNRC6C	99	85.149	ENSMFAG00000043943	TNRC6C	100	87.176	Macaca_fascicularis
ENSMODG00000001785	TNRC6C	99	84.935	ENSMMUG00000011924	TNRC6C	100	87.176	Macaca_mulatta
ENSMODG00000001785	TNRC6C	99	85.231	ENSMNEG00000030405	TNRC6C	100	87.176	Macaca_nemestrina
ENSMODG00000001785	TNRC6C	99	85.231	ENSMLEG00000033436	TNRC6C	100	87.176	Mandrillus_leucophaeus
ENSMODG00000001785	TNRC6C	95	52.749	ENSMAMG00000023613	tnrc6c1	100	48.797	Mastacembelus_armatus
ENSMODG00000001785	TNRC6C	97	51.057	ENSMZEG00005010920	tnrc6c1	99	47.632	Maylandia_zebra
ENSMODG00000001785	TNRC6C	99	79.201	ENSMGAG00000003906	TNRC6C	100	79.512	Meleagris_gallopavo
ENSMODG00000001785	TNRC6C	89	84.375	ENSMAUG00000021618	Tnrc6c	100	84.847	Mesocricetus_auratus
ENSMODG00000001785	TNRC6C	99	85.187	ENSMICG00000003952	TNRC6C	100	87.066	Microcebus_murinus
ENSMODG00000001785	TNRC6C	99	85.343	ENSMOCG00000015879	Tnrc6c	100	85.911	Microtus_ochrogaster
ENSMODG00000001785	TNRC6C	70	55.740	ENSMMOG00000005203	tnrc6c1	97	51.654	Mola_mola
ENSMODG00000001785	TNRC6C	99	84.758	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	85.338	Mus_caroli
ENSMODG00000001785	TNRC6C	99	84.387	ENSMUSG00000025571	Tnrc6c	100	84.994	Mus_musculus
ENSMODG00000001785	TNRC6C	99	84.599	MGP_PahariEiJ_G0018593	Tnrc6c	100	85.166	Mus_pahari
ENSMODG00000001785	TNRC6C	99	84.546	MGP_SPRETEiJ_G0018309	Tnrc6c	100	85.166	Mus_spretus
ENSMODG00000001785	TNRC6C	99	81.247	ENSMPUG00000013348	TNRC6C	98	81.383	Mustela_putorius_furo
ENSMODG00000001785	TNRC6C	99	76.340	ENSMLUG00000014431	TNRC6C	98	77.296	Myotis_lucifugus
ENSMODG00000001785	TNRC6C	99	84.113	ENSNGAG00000012203	Tnrc6c	99	84.272	Nannospalax_galili
ENSMODG00000001785	TNRC6C	93	51.738	ENSNBRG00000005344	tnrc6c1	99	48.305	Neolamprologus_brichardi
ENSMODG00000001785	TNRC6C	98	83.090	ENSNLEG00000000047	TNRC6C	99	83.351	Nomascus_leucogenys
ENSMODG00000001785	TNRC6C	89	88.087	ENSMEUG00000005104	TNRC6C	100	88.380	Notamacropus_eugenii
ENSMODG00000001785	TNRC6C	89	85.849	ENSODEG00000012499	TNRC6C	100	86.439	Octodon_degus
ENSMODG00000001785	TNRC6C	83	51.875	ENSONIG00000002210	tnrc6c1	97	51.763	Oreochromis_niloticus
ENSMODG00000001785	TNRC6C	99	63.622	ENSOANG00000009758	-	100	63.994	Ornithorhynchus_anatinus
ENSMODG00000001785	TNRC6C	52	70.289	ENSOCUG00000006122	TNRC6C	95	70.352	Oryctolagus_cuniculus
ENSMODG00000001785	TNRC6C	93	46.913	ENSORLG00000009837	tnrc6c1	100	69.145	Oryzias_latipes
ENSMODG00000001785	TNRC6C	93	45.637	ENSORLG00020016510	tnrc6c1	100	46.493	Oryzias_latipes_hni
ENSMODG00000001785	TNRC6C	76	41.426	ENSORLG00015000171	tnrc6c1	98	42.382	Oryzias_latipes_hsok
ENSMODG00000001785	TNRC6C	93	47.197	ENSOMEG00000000357	tnrc6c1	100	47.649	Oryzias_melastigma
ENSMODG00000001785	TNRC6C	89	83.170	ENSOGAG00000007197	TNRC6C	100	83.573	Otolemur_garnettii
ENSMODG00000001785	TNRC6C	95	77.543	ENSOARG00000006041	TNRC6C	98	78.030	Ovis_aries
ENSMODG00000001785	TNRC6C	99	84.984	ENSPPAG00000027160	TNRC6C	100	86.882	Pan_paniscus
ENSMODG00000001785	TNRC6C	99	81.610	ENSPPRG00000018881	TNRC6C	100	84.195	Panthera_pardus
ENSMODG00000001785	TNRC6C	88	79.189	ENSPTIG00000008791	TNRC6C	70	72.921	Panthera_tigris_altaica
ENSMODG00000001785	TNRC6C	99	85.127	ENSPTRG00000009699	TNRC6C	100	86.941	Pan_troglodytes
ENSMODG00000001785	TNRC6C	99	85.231	ENSPANG00000019994	TNRC6C	100	87.331	Papio_anubis
ENSMODG00000001785	TNRC6C	85	62.111	ENSPKIG00000005428	tnrc6c1	98	52.454	Paramormyrops_kingsleyae
ENSMODG00000001785	TNRC6C	92	86.514	ENSPSIG00000018069	TNRC6C	100	87.200	Pelodiscus_sinensis
ENSMODG00000001785	TNRC6C	58	55.365	ENSPMGG00000022911	tnrc6c1	97	65.714	Periophthalmus_magnuspinnatus
ENSMODG00000001785	TNRC6C	99	84.758	ENSPEMG00000009785	Tnrc6c	99	85.343	Peromyscus_maniculatus_bairdii
ENSMODG00000001785	TNRC6C	51	95.773	ENSPCIG00000017421	-	99	95.773	Phascolarctos_cinereus
ENSMODG00000001785	TNRC6C	96	48.583	ENSPFOG00000012560	tnrc6c1	97	54.896	Poecilia_formosa
ENSMODG00000001785	TNRC6C	83	50.411	ENSPLAG00000021055	tnrc6c1	97	50.423	Poecilia_latipinna
ENSMODG00000001785	TNRC6C	99	85.091	ENSPPYG00000008679	TNRC6C	98	85.387	Pongo_abelii
ENSMODG00000001785	TNRC6C	86	90.521	ENSPCAG00000012510	TNRC6C	94	90.521	Procavia_capensis
ENSMODG00000001785	TNRC6C	89	86.941	ENSPCOG00000021451	TNRC6C	100	87.588	Propithecus_coquereli
ENSMODG00000001785	TNRC6C	88	85.593	ENSPVAG00000002008	TNRC6C	95	85.593	Pteropus_vampyrus
ENSMODG00000001785	TNRC6C	93	50.000	ENSPNYG00000014477	tnrc6c1	99	47.285	Pundamilia_nyererei
ENSMODG00000001785	TNRC6C	89	84.688	ENSRNOG00000022395	Tnrc6c	100	85.041	Rattus_norvegicus
ENSMODG00000001785	TNRC6C	99	85.297	ENSRBIG00000027777	TNRC6C	100	87.294	Rhinopithecus_bieti
ENSMODG00000001785	TNRC6C	99	85.283	ENSRROG00000042912	TNRC6C	100	87.235	Rhinopithecus_roxellana
ENSMODG00000001785	TNRC6C	99	84.656	ENSSBOG00000023981	TNRC6C	100	84.620	Saimiri_boliviensis_boliviensis
ENSMODG00000001785	TNRC6C	80	56.915	ENSSFOG00015004735	-	99	62.042	Scleropages_formosus
ENSMODG00000001785	TNRC6C	93	47.567	ENSSMAG00000012761	tnrc6c1	99	50.955	Scophthalmus_maximus
ENSMODG00000001785	TNRC6C	93	49.675	ENSSDUG00000002366	tnrc6c1	98	51.053	Seriola_dumerili
ENSMODG00000001785	TNRC6C	83	50.383	ENSSLDG00000025613	tnrc6c1	97	50.709	Seriola_lalandi_dorsalis
ENSMODG00000001785	TNRC6C	84	88.235	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSMODG00000001785	TNRC6C	82	84.610	ENSSPUG00000007341	TNRC6C	99	85.081	Sphenodon_punctatus
ENSMODG00000001785	TNRC6C	70	53.672	ENSSPAG00000014977	tnrc6c1	98	48.285	Stegastes_partitus
ENSMODG00000001785	TNRC6C	86	84.332	ENSSSCG00000034373	TNRC6C	100	80.542	Sus_scrofa
ENSMODG00000001785	TNRC6C	92	87.950	ENSTGUG00000007733	TNRC6C	100	88.692	Taeniopygia_guttata
ENSMODG00000001785	TNRC6C	70	53.592	ENSTRUG00000011685	tnrc6c1	97	49.660	Takifugu_rubripes
ENSMODG00000001785	TNRC6C	88	54.493	ENSTNIG00000005273	tnrc6c1	100	59.883	Tetraodon_nigroviridis
ENSMODG00000001785	TNRC6C	57	88.672	ENSTBEG00000005046	TNRC6C	100	77.710	Tupaia_belangeri
ENSMODG00000001785	TNRC6C	92	85.200	ENSTTRG00000010828	TNRC6C	99	85.429	Tursiops_truncatus
ENSMODG00000001785	TNRC6C	99	83.184	ENSUMAG00000013614	TNRC6C	99	84.032	Ursus_maritimus
ENSMODG00000001785	TNRC6C	89	86.093	ENSVVUG00000015268	TNRC6C	100	86.800	Vulpes_vulpes
ENSMODG00000001785	TNRC6C	89	75.395	ENSXETG00000019470	tnrc6c	100	75.439	Xenopus_tropicalis
ENSMODG00000001785	TNRC6C	99	47.809	ENSXMAG00000025971	tnrc6c1	99	50.521	Xiphophorus_maculatus