EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000001880 (Gene tree)
Gene ID: 100014233
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 84-like
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 12579 bases
Position: chr8:213308335-213320913
Accession: 100014233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	1	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	2	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	3	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	4	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	5	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	6	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	7	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	8	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	9	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	10	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	11	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	12	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	13	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	14	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	15	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	16	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	17	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	18	19
ENSMODP00000033693	zf-C2H2	PF00096.26	3e-98	19	19
ENSMODP00000033693	zf-met	PF12874.7	1.2e-07	1	2
ENSMODP00000033693	zf-met	PF12874.7	1.2e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000035274	-	4881	-	ENSMODP00000033693	857 (aa)	XP_007504591	F6V0G1

Gene Model

Click here to download ENSMODG00000001880's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000001880's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000001880	-	99	41.117	ENSMODG00000024585	-	75	41.117
ENSMODG00000001880	-	79	43.871	ENSMODG00000008516	-	100	43.871
ENSMODG00000001880	-	80	39.220	ENSMODG00000018942	PRDM5	74	39.220
ENSMODG00000001880	-	79	35.163	ENSMODG00000017494	ZNF628	63	32.725
ENSMODG00000001880	-	79	45.276	ENSMODG00000027841	ZNF768	70	45.276
ENSMODG00000001880	-	99	44.944	ENSMODG00000028916	-	88	44.944
ENSMODG00000001880	-	99	52.305	ENSMODG00000010532	-	98	50.678
ENSMODG00000001880	-	81	47.569	ENSMODG00000018622	-	98	47.569
ENSMODG00000001880	-	99	44.983	ENSMODG00000023146	-	99	44.983
ENSMODG00000001880	-	80	38.235	ENSMODG00000014052	-	99	38.235
ENSMODG00000001880	-	81	35.135	ENSMODG00000006238	GZF1	100	36.163

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000001880	-	99	46.954	ENSACAG00000024956	-	99	46.954	Anolis_carolinensis
ENSMODG00000001880	-	80	48.425	ENSACAG00000024898	-	98	48.425	Anolis_carolinensis
ENSMODG00000001880	-	81	43.109	ENSACAG00000008664	-	69	43.109	Anolis_carolinensis
ENSMODG00000001880	-	80	48.518	ENSAMXG00000038536	-	87	48.518	Astyanax_mexicanus
ENSMODG00000001880	-	79	48.077	ENSAMXG00000034344	-	79	48.077	Astyanax_mexicanus
ENSMODG00000001880	-	80	47.439	ENSAMXG00000042746	-	87	47.439	Astyanax_mexicanus
ENSMODG00000001880	-	79	48.837	ENSAMXG00000038636	-	97	48.837	Astyanax_mexicanus
ENSMODG00000001880	-	80	47.267	ENSAMXG00000038325	-	92	47.267	Astyanax_mexicanus
ENSMODG00000001880	-	77	47.414	ENSAMXG00000042784	-	83	45.188	Astyanax_mexicanus
ENSMODG00000001880	-	80	49.248	ENSAMXG00000036233	-	85	49.248	Astyanax_mexicanus
ENSMODG00000001880	-	79	49.254	ENSAMXG00000032841	-	78	49.254	Astyanax_mexicanus
ENSMODG00000001880	-	79	48.693	ENSAMXG00000025452	-	99	48.693	Astyanax_mexicanus
ENSMODG00000001880	-	81	50.998	ENSAMXG00000010805	-	98	49.478	Astyanax_mexicanus
ENSMODG00000001880	-	79	40.291	ENSAMXG00000035246	-	73	40.291	Astyanax_mexicanus
ENSMODG00000001880	-	82	47.607	ENSAMXG00000034847	-	90	47.607	Astyanax_mexicanus
ENSMODG00000001880	-	79	40.594	ENSBTAG00000038322	-	78	40.594	Bos_taurus
ENSMODG00000001880	-	79	42.123	ENSCPBG00000013652	-	81	42.123	Chrysemys_picta_bellii
ENSMODG00000001880	-	80	42.574	ENSCPBG00000001526	-	83	42.574	Chrysemys_picta_bellii
ENSMODG00000001880	-	95	45.161	ENSCPBG00000008580	-	100	45.455	Chrysemys_picta_bellii
ENSMODG00000001880	-	80	40.995	ENSCSAVG00000010960	-	100	37.251	Ciona_savignyi
ENSMODG00000001880	-	80	41.694	ENSDNOG00000047495	-	99	41.694	Dasypus_novemcinctus
ENSMODG00000001880	-	78	37.156	ENSEBUG00000005264	-	77	37.156	Eptatretus_burgeri
ENSMODG00000001880	-	79	39.721	ENSEBUG00000008306	-	79	39.721	Eptatretus_burgeri
ENSMODG00000001880	-	94	38.868	ENSEBUG00000014717	-	94	38.868	Eptatretus_burgeri
ENSMODG00000001880	-	80	42.670	ENSEBUG00000011694	-	97	42.585	Eptatretus_burgeri
ENSMODG00000001880	-	79	41.758	ENSEBUG00000012919	-	77	40.084	Eptatretus_burgeri
ENSMODG00000001880	-	81	41.704	ENSEBUG00000011435	-	83	39.614	Eptatretus_burgeri
ENSMODG00000001880	-	79	39.089	ENSEBUG00000002075	-	81	38.902	Eptatretus_burgeri
ENSMODG00000001880	-	79	40.141	ENSEBUG00000015837	-	80	38.871	Eptatretus_burgeri
ENSMODG00000001880	-	79	36.181	ENSEBUG00000013875	-	87	36.181	Eptatretus_burgeri
ENSMODG00000001880	-	79	40.924	ENSEASG00005004469	-	73	40.924	Equus_asinus_asinus
ENSMODG00000001880	-	88	42.857	ENSFHEG00000004382	-	66	42.857	Fundulus_heteroclitus
ENSMODG00000001880	-	84	36.712	ENSGMOG00000018506	-	100	36.712	Gadus_morhua
ENSMODG00000001880	-	84	51.155	ENSGALG00000046336	-	98	51.155	Gallus_gallus
ENSMODG00000001880	-	82	43.099	ENSGALG00000053507	-	78	43.099	Gallus_gallus
ENSMODG00000001880	-	79	44.118	ENSGALG00000055127	-	72	44.118	Gallus_gallus
ENSMODG00000001880	-	87	46.875	ENSGALG00000054325	-	97	46.875	Gallus_gallus
ENSMODG00000001880	-	79	43.234	ENSGALG00000049609	-	64	43.234	Gallus_gallus
ENSMODG00000001880	-	99	49.394	ENSGALG00000044069	-	81	49.394	Gallus_gallus
ENSMODG00000001880	-	73	48.855	ENSGACG00000006283	-	99	48.855	Gasterosteus_aculeatus
ENSMODG00000001880	-	80	44.724	ENSGAGG00000011399	-	86	43.825	Gopherus_agassizii
ENSMODG00000001880	-	81	51.186	ENSGAGG00000018885	-	70	51.186	Gopherus_agassizii
ENSMODG00000001880	-	80	44.277	ENSGAGG00000011366	-	94	44.277	Gopherus_agassizii
ENSMODG00000001880	-	80	40.767	ENSHCOG00000018201	-	81	40.767	Hippocampus_comes
ENSMODG00000001880	-	79	48.654	ENSIPUG00000021515	-	87	46.441	Ictalurus_punctatus
ENSMODG00000001880	-	98	48.201	ENSIPUG00000015468	-	92	44.907	Ictalurus_punctatus
ENSMODG00000001880	-	81	35.185	ENSIPUG00000012109	ZN12	52	35.185	Ictalurus_punctatus
ENSMODG00000001880	-	80	37.793	ENSJJAG00000023633	Zfp672	92	38.537	Jaculus_jaculus
ENSMODG00000001880	-	79	36.071	ENSLACG00000005264	-	98	36.071	Latimeria_chalumnae
ENSMODG00000001880	-	98	45.693	ENSLACG00000022211	-	98	45.693	Latimeria_chalumnae
ENSMODG00000001880	-	80	36.860	ENSLACG00000009005	-	100	36.860	Latimeria_chalumnae
ENSMODG00000001880	-	79	42.434	ENSLOCG00000017864	-	99	42.434	Lepisosteus_oculatus
ENSMODG00000001880	-	79	44.560	ENSLOCG00000014210	-	50	44.560	Lepisosteus_oculatus
ENSMODG00000001880	-	82	44.152	ENSMGAG00000013362	-	100	44.152	Meleagris_gallopavo
ENSMODG00000001880	-	80	38.350	ENSMAUG00000009945	Zfp672	91	38.929	Mesocricetus_auratus
ENSMODG00000001880	-	76	45.865	ENSMMOG00000003923	-	90	45.865	Mola_mola
ENSMODG00000001880	-	99	45.344	MGP_CAROLIEiJ_G0030502	-	92	45.344	Mus_caroli
ENSMODG00000001880	-	79	38.107	MGP_CAROLIEiJ_G0016391	Zfp672	96	51.220	Mus_caroli
ENSMODG00000001880	-	99	44.097	ENSMUSG00000030823	9130019O22Rik	90	44.156	Mus_musculus
ENSMODG00000001880	-	79	37.864	ENSMUSG00000049755	Zfp672	99	41.026	Mus_musculus
ENSMODG00000001880	-	80	45.344	MGP_SPRETEiJ_G0031613	-	84	45.344	Mus_spretus
ENSMODG00000001880	-	79	37.621	MGP_SPRETEiJ_G0017233	Zfp672	99	40.260	Mus_spretus
ENSMODG00000001880	-	99	41.806	ENSNGAG00000015777	Zim1	95	41.806	Nannospalax_galili
ENSMODG00000001880	-	79	38.567	ENSNBRG00000000708	-	92	38.567	Neolamprologus_brichardi
ENSMODG00000001880	-	73	42.742	ENSNBRG00000007276	-	63	42.742	Neolamprologus_brichardi
ENSMODG00000001880	-	73	46.154	ENSORLG00020001922	-	71	44.776	Oryzias_latipes_hni
ENSMODG00000001880	-	78	46.281	ENSOMEG00000001598	-	69	46.281	Oryzias_melastigma
ENSMODG00000001880	-	99	45.561	ENSPSIG00000015459	-	96	45.561	Pelodiscus_sinensis
ENSMODG00000001880	-	79	38.817	ENSPSIG00000006586	-	99	38.817	Pelodiscus_sinensis
ENSMODG00000001880	-	99	46.038	ENSPSIG00000004502	-	89	46.038	Pelodiscus_sinensis
ENSMODG00000001880	-	99	45.220	ENSPSIG00000010248	-	94	45.220	Pelodiscus_sinensis
ENSMODG00000001880	-	99	44.397	ENSPSIG00000010328	-	96	44.397	Pelodiscus_sinensis
ENSMODG00000001880	-	79	43.096	ENSPSIG00000000672	-	85	43.096	Pelodiscus_sinensis
ENSMODG00000001880	-	99	48.035	ENSPSIG00000013021	-	97	48.035	Pelodiscus_sinensis
ENSMODG00000001880	-	99	43.305	ENSPSIG00000005603	-	96	43.305	Pelodiscus_sinensis
ENSMODG00000001880	-	79	41.981	ENSPSIG00000012650	-	79	40.664	Pelodiscus_sinensis
ENSMODG00000001880	-	99	47.445	ENSPSIG00000005672	-	96	47.445	Pelodiscus_sinensis
ENSMODG00000001880	-	76	51.250	ENSPSIG00000006790	-	94	51.250	Pelodiscus_sinensis
ENSMODG00000001880	-	99	46.842	ENSPSIG00000016380	-	96	46.842	Pelodiscus_sinensis
ENSMODG00000001880	-	80	42.292	ENSPSIG00000003152	-	79	42.292	Pelodiscus_sinensis
ENSMODG00000001880	-	80	41.076	ENSPREG00000002642	-	94	41.076	Poecilia_reticulata
ENSMODG00000001880	-	83	48.333	ENSPNYG00000015486	-	60	48.333	Pundamilia_nyererei
ENSMODG00000001880	-	79	54.639	ENSPNAG00000000088	-	94	54.639	Pygocentrus_nattereri
ENSMODG00000001880	-	79	52.968	ENSPNAG00000018395	-	77	52.968	Pygocentrus_nattereri
ENSMODG00000001880	-	79	38.554	ENSRNOG00000002713	Zfp672	89	37.868	Rattus_norvegicus
ENSMODG00000001880	-	99	48.829	ENSSHAG00000018106	-	99	46.182	Sarcophilus_harrisii
ENSMODG00000001880	-	88	46.288	ENSSFOG00015019818	-	95	42.816	Scleropages_formosus
ENSMODG00000001880	-	79	38.919	ENSSMAG00000004252	-	90	38.919	Scophthalmus_maximus
ENSMODG00000001880	-	79	48.496	ENSSPUG00000004366	-	61	48.496	Sphenodon_punctatus
ENSMODG00000001880	-	80	46.118	ENSSPUG00000010016	-	94	46.118	Sphenodon_punctatus
ENSMODG00000001880	-	81	50.000	ENSSPAG00000021653	-	81	50.000	Stegastes_partitus
ENSMODG00000001880	-	79	46.269	ENSTGUG00000015210	-	100	46.269	Taeniopygia_guttata
ENSMODG00000001880	-	98	39.024	ENSTRUG00000022066	-	88	41.538	Takifugu_rubripes
ENSMODG00000001880	-	81	39.857	ENSXETG00000031192	-	100	39.100	Xenopus_tropicalis
ENSMODG00000001880	-	79	46.332	ENSXCOG00000006553	-	86	46.332	Xiphophorus_couchianus
ENSMODG00000001880	-	80	41.410	ENSXMAG00000026680	-	83	41.228	Xiphophorus_maculatus