EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000002042 (Gene tree)
Gene ID: 100014121
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 23872 bases
Position: chr1:218814313-218838184
Accession: 100014121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000002490	Beta-Casp	PF10996.8	2e-20	1	1
ENSMODP00000002490	Lactamase_B	PF00753.27	1.1e-06	1	1
ENSMODP00000002490	RMMBL	PF07521.12	8.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000002542	CPSF2-201	5034	-	ENSMODP00000002490	782 (aa)	XP_001365312	F6QCB9

Gene Model

Click here to download ENSMODG00000002042's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000002042's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000002042	CPSF2	100	98.849	ENSG00000165934	CPSF2	100	98.849	Homo_sapiens
ENSMODG00000002042	CPSF2	100	86.058	ENSAPOG00000001242	cpsf2	100	86.058	Acanthochromis_polyacanthus
ENSMODG00000002042	CPSF2	100	86.076	ENSACIG00000009331	cpsf2	100	86.203	Amphilophus_citrinellus
ENSMODG00000002042	CPSF2	100	86.185	ENSAOCG00000014095	cpsf2	100	86.185	Amphiprion_ocellaris
ENSMODG00000002042	CPSF2	100	86.185	ENSAPEG00000009158	cpsf2	100	86.185	Amphiprion_percula
ENSMODG00000002042	CPSF2	96	86.184	ENSATEG00000017644	cpsf2	100	84.140	Anabas_testudineus
ENSMODG00000002042	CPSF2	100	96.688	ENSAPLG00000006330	CPSF2	100	96.688	Anas_platyrhynchos
ENSMODG00000002042	CPSF2	100	95.402	ENSACAG00000009245	CPSF2	100	95.402	Anolis_carolinensis
ENSMODG00000002042	CPSF2	100	99.105	ENSANAG00000022915	CPSF2	100	99.105	Aotus_nancymaae
ENSMODG00000002042	CPSF2	100	85.896	ENSAMXG00000018696	cpsf2	100	85.896	Astyanax_mexicanus
ENSMODG00000002042	CPSF2	100	98.849	ENSBTAG00000010227	CPSF2	100	98.849	Bos_taurus
ENSMODG00000002042	CPSF2	100	41.335	WBGene00017313	cpsf-2	100	40.797	Caenorhabditis_elegans
ENSMODG00000002042	CPSF2	100	99.105	ENSCJAG00000018069	CPSF2	100	99.105	Callithrix_jacchus
ENSMODG00000002042	CPSF2	100	98.977	ENSCAFG00000010909	CPSF2	100	98.977	Canis_familiaris
ENSMODG00000002042	CPSF2	100	98.977	ENSCAFG00020020670	CPSF2	100	98.977	Canis_lupus_dingo
ENSMODG00000002042	CPSF2	100	98.849	ENSCHIG00000023848	CPSF2	100	98.849	Capra_hircus
ENSMODG00000002042	CPSF2	100	98.210	ENSTSYG00000009036	CPSF2	100	98.210	Carlito_syrichta
ENSMODG00000002042	CPSF2	100	99.105	ENSCPOG00000010899	CPSF2	100	99.105	Cavia_porcellus
ENSMODG00000002042	CPSF2	100	99.105	ENSCCAG00000028088	CPSF2	100	99.105	Cebus_capucinus
ENSMODG00000002042	CPSF2	100	98.977	ENSCATG00000030132	CPSF2	100	98.977	Cercocebus_atys
ENSMODG00000002042	CPSF2	100	98.977	ENSCLAG00000012404	CPSF2	100	98.977	Chinchilla_lanigera
ENSMODG00000002042	CPSF2	100	98.977	ENSCSAG00000011300	CPSF2	100	98.977	Chlorocebus_sabaeus
ENSMODG00000002042	CPSF2	100	91.944	ENSCHOG00000012904	CPSF2	100	91.944	Choloepus_hoffmanni
ENSMODG00000002042	CPSF2	100	97.063	ENSCPBG00000008766	CPSF2	97	97.063	Chrysemys_picta_bellii
ENSMODG00000002042	CPSF2	100	54.875	ENSCING00000007881	-	100	54.500	Ciona_intestinalis
ENSMODG00000002042	CPSF2	94	98.907	ENSCANG00000041651	CPSF2	100	98.907	Colobus_angolensis_palliatus
ENSMODG00000002042	CPSF2	100	98.465	ENSCGRG00001006901	Cpsf2	100	98.465	Cricetulus_griseus_chok1gshd
ENSMODG00000002042	CPSF2	100	98.465	ENSCGRG00000012416	Cpsf2	100	98.465	Cricetulus_griseus_crigri
ENSMODG00000002042	CPSF2	100	84.030	ENSCSEG00000004116	cpsf2	100	84.030	Cynoglossus_semilaevis
ENSMODG00000002042	CPSF2	100	85.298	ENSCVAG00000000095	cpsf2	100	85.425	Cyprinodon_variegatus
ENSMODG00000002042	CPSF2	100	85.823	ENSDARG00000028971	cpsf2	100	85.823	Danio_rerio
ENSMODG00000002042	CPSF2	100	99.233	ENSDNOG00000042757	CPSF2	100	99.233	Dasypus_novemcinctus
ENSMODG00000002042	CPSF2	100	98.721	ENSDORG00000013709	Cpsf2	100	98.721	Dipodomys_ordii
ENSMODG00000002042	CPSF2	100	54.047	FBgn0027873	Cpsf100	100	53.933	Drosophila_melanogaster
ENSMODG00000002042	CPSF2	100	89.783	ENSETEG00000012123	CPSF2	100	89.783	Echinops_telfairi
ENSMODG00000002042	CPSF2	52	76.716	ENSEBUG00000012098	cpsf2	93	76.716	Eptatretus_burgeri
ENSMODG00000002042	CPSF2	91	97.270	ENSEASG00005021193	CPSF2	100	97.270	Equus_asinus_asinus
ENSMODG00000002042	CPSF2	100	98.849	ENSECAG00000023935	CPSF2	100	98.849	Equus_caballus
ENSMODG00000002042	CPSF2	100	84.567	ENSELUG00000008442	cpsf2	100	84.567	Esox_lucius
ENSMODG00000002042	CPSF2	100	98.849	ENSFCAG00000007886	CPSF2	100	98.849	Felis_catus
ENSMODG00000002042	CPSF2	100	96.935	ENSFALG00000002412	CPSF2	100	96.935	Ficedula_albicollis
ENSMODG00000002042	CPSF2	100	98.977	ENSFDAG00000006327	CPSF2	100	98.977	Fukomys_damarensis
ENSMODG00000002042	CPSF2	96	84.706	ENSFHEG00000015465	cpsf2	98	85.229	Fundulus_heteroclitus
ENSMODG00000002042	CPSF2	100	83.586	ENSGMOG00000008761	cpsf2	100	83.586	Gadus_morhua
ENSMODG00000002042	CPSF2	100	96.041	ENSGALG00000010783	CPSF2	100	96.552	Gallus_gallus
ENSMODG00000002042	CPSF2	100	85.551	ENSGAFG00000001407	cpsf2	100	85.551	Gambusia_affinis
ENSMODG00000002042	CPSF2	100	84.664	ENSGACG00000008418	cpsf2	100	84.664	Gasterosteus_aculeatus
ENSMODG00000002042	CPSF2	100	97.190	ENSGAGG00000008287	CPSF2	100	97.190	Gopherus_agassizii
ENSMODG00000002042	CPSF2	100	98.849	ENSGGOG00000011799	CPSF2	100	98.849	Gorilla_gorilla
ENSMODG00000002042	CPSF2	100	85.298	ENSHBUG00000023466	cpsf2	100	85.298	Haplochromis_burtoni
ENSMODG00000002042	CPSF2	100	98.849	ENSHGLG00000018311	CPSF2	100	98.849	Heterocephalus_glaber_female
ENSMODG00000002042	CPSF2	100	98.849	ENSHGLG00100016460	CPSF2	100	98.849	Heterocephalus_glaber_male
ENSMODG00000002042	CPSF2	100	85.171	ENSHCOG00000019527	cpsf2	98	85.171	Hippocampus_comes
ENSMODG00000002042	CPSF2	100	86.023	ENSIPUG00000020857	cpsf2	100	86.023	Ictalurus_punctatus
ENSMODG00000002042	CPSF2	100	99.233	ENSSTOG00000009528	CPSF2	100	99.233	Ictidomys_tridecemlineatus
ENSMODG00000002042	CPSF2	100	98.593	ENSJJAG00000017925	Cpsf2	100	98.593	Jaculus_jaculus
ENSMODG00000002042	CPSF2	100	84.791	ENSKMAG00000019429	cpsf2	100	84.791	Kryptolebias_marmoratus
ENSMODG00000002042	CPSF2	95	84.225	ENSLBEG00000011585	cpsf2	100	84.492	Labrus_bergylta
ENSMODG00000002042	CPSF2	100	89.655	ENSLACG00000019024	CPSF2	100	90.166	Latimeria_chalumnae
ENSMODG00000002042	CPSF2	100	87.706	ENSLOCG00000014102	cpsf2	100	87.706	Lepisosteus_oculatus
ENSMODG00000002042	CPSF2	100	98.597	ENSLAFG00000004891	CPSF2	100	98.597	Loxodonta_africana
ENSMODG00000002042	CPSF2	100	98.977	ENSMFAG00000041212	CPSF2	100	98.977	Macaca_fascicularis
ENSMODG00000002042	CPSF2	100	98.977	ENSMMUG00000000699	CPSF2	100	98.977	Macaca_mulatta
ENSMODG00000002042	CPSF2	100	98.977	ENSMNEG00000031584	CPSF2	100	98.977	Macaca_nemestrina
ENSMODG00000002042	CPSF2	100	98.977	ENSMLEG00000029394	CPSF2	100	98.977	Mandrillus_leucophaeus
ENSMODG00000002042	CPSF2	100	85.932	ENSMAMG00000004235	cpsf2	100	85.932	Mastacembelus_armatus
ENSMODG00000002042	CPSF2	100	85.425	ENSMZEG00005001769	cpsf2	100	85.425	Maylandia_zebra
ENSMODG00000002042	CPSF2	100	96.046	ENSMGAG00000013122	CPSF2	100	96.556	Meleagris_gallopavo
ENSMODG00000002042	CPSF2	100	98.465	ENSMAUG00000015160	Cpsf2	100	98.465	Mesocricetus_auratus
ENSMODG00000002042	CPSF2	100	99.105	ENSMICG00000016441	CPSF2	100	99.105	Microcebus_murinus
ENSMODG00000002042	CPSF2	100	98.465	ENSMOCG00000015372	Cpsf2	100	98.465	Microtus_ochrogaster
ENSMODG00000002042	CPSF2	100	81.496	ENSMMOG00000015590	cpsf2	100	81.496	Mola_mola
ENSMODG00000002042	CPSF2	100	83.016	ENSMALG00000022275	cpsf2	100	83.016	Monopterus_albus
ENSMODG00000002042	CPSF2	100	97.570	ENSMUSG00000041781	Cpsf2	100	97.570	Mus_musculus
ENSMODG00000002042	CPSF2	100	97.826	MGP_PahariEiJ_G0029791	Cpsf2	100	97.826	Mus_pahari
ENSMODG00000002042	CPSF2	100	97.570	MGP_SPRETEiJ_G0018877	Cpsf2	100	97.570	Mus_spretus
ENSMODG00000002042	CPSF2	100	98.977	ENSMPUG00000007617	CPSF2	98	98.977	Mustela_putorius_furo
ENSMODG00000002042	CPSF2	100	98.465	ENSMLUG00000005570	CPSF2	100	98.465	Myotis_lucifugus
ENSMODG00000002042	CPSF2	100	98.593	ENSNGAG00000020312	Cpsf2	100	98.593	Nannospalax_galili
ENSMODG00000002042	CPSF2	100	85.805	ENSNBRG00000022402	cpsf2	100	85.805	Neolamprologus_brichardi
ENSMODG00000002042	CPSF2	100	97.954	ENSNLEG00000017132	CPSF2	100	97.954	Nomascus_leucogenys
ENSMODG00000002042	CPSF2	91	100.000	ENSMEUG00000008138	CPSF2	91	100.000	Notamacropus_eugenii
ENSMODG00000002042	CPSF2	94	91.257	ENSOPRG00000008484	-	100	91.257	Ochotona_princeps
ENSMODG00000002042	CPSF2	100	98.977	ENSODEG00000008682	CPSF2	100	98.977	Octodon_degus
ENSMODG00000002042	CPSF2	100	86.185	ENSONIG00000005901	cpsf2	100	86.185	Oreochromis_niloticus
ENSMODG00000002042	CPSF2	100	98.721	ENSOANG00000003822	CPSF2	100	98.721	Ornithorhynchus_anatinus
ENSMODG00000002042	CPSF2	100	98.593	ENSOCUG00000005713	CPSF2	100	98.593	Oryctolagus_cuniculus
ENSMODG00000002042	CPSF2	100	80.228	ENSORLG00000011628	cpsf2	100	80.228	Oryzias_latipes
ENSMODG00000002042	CPSF2	100	85.171	ENSORLG00020016980	cpsf2	100	85.171	Oryzias_latipes_hni
ENSMODG00000002042	CPSF2	100	85.171	ENSORLG00015011910	cpsf2	100	85.171	Oryzias_latipes_hsok
ENSMODG00000002042	CPSF2	100	84.284	ENSOMEG00000022876	cpsf2	100	84.284	Oryzias_melastigma
ENSMODG00000002042	CPSF2	100	95.791	ENSOARG00000012889	CPSF2	100	95.791	Ovis_aries
ENSMODG00000002042	CPSF2	100	98.849	ENSPPAG00000039666	CPSF2	100	98.849	Pan_paniscus
ENSMODG00000002042	CPSF2	99	98.848	ENSPPRG00000010869	CPSF2	100	98.848	Panthera_pardus
ENSMODG00000002042	CPSF2	100	98.849	ENSPTIG00000021202	CPSF2	100	98.849	Panthera_tigris_altaica
ENSMODG00000002042	CPSF2	100	98.849	ENSPTRG00000006651	CPSF2	100	98.849	Pan_troglodytes
ENSMODG00000002042	CPSF2	100	98.977	ENSPANG00000017417	CPSF2	100	98.977	Papio_anubis
ENSMODG00000002042	CPSF2	100	81.576	ENSPKIG00000021453	cpsf2	100	81.576	Paramormyrops_kingsleyae
ENSMODG00000002042	CPSF2	100	96.296	ENSPSIG00000006289	CPSF2	100	96.296	Pelodiscus_sinensis
ENSMODG00000002042	CPSF2	76	79.568	ENSPMGG00000002511	cpsf2	100	79.900	Periophthalmus_magnuspinnatus
ENSMODG00000002042	CPSF2	100	98.593	ENSPEMG00000007917	Cpsf2	100	98.593	Peromyscus_maniculatus_bairdii
ENSMODG00000002042	CPSF2	100	74.083	ENSPMAG00000006205	cpsf2	100	74.083	Petromyzon_marinus
ENSMODG00000002042	CPSF2	100	100.000	ENSPCIG00000011393	CPSF2	100	100.000	Phascolarctos_cinereus
ENSMODG00000002042	CPSF2	100	85.425	ENSPFOG00000018648	cpsf2	100	85.425	Poecilia_formosa
ENSMODG00000002042	CPSF2	100	85.425	ENSPLAG00000019199	cpsf2	99	85.425	Poecilia_latipinna
ENSMODG00000002042	CPSF2	96	85.789	ENSPMEG00000012100	cpsf2	100	85.160	Poecilia_mexicana
ENSMODG00000002042	CPSF2	100	85.551	ENSPREG00000008960	cpsf2	100	85.551	Poecilia_reticulata
ENSMODG00000002042	CPSF2	63	98.387	ENSPPYG00000029685	-	100	98.387	Pongo_abelii
ENSMODG00000002042	CPSF2	100	98.465	ENSPCAG00000012477	CPSF2	100	98.465	Procavia_capensis
ENSMODG00000002042	CPSF2	100	98.849	ENSPCOG00000026387	CPSF2	100	98.849	Propithecus_coquereli
ENSMODG00000002042	CPSF2	65	99.490	ENSPVAG00000004223	CPSF2	65	99.490	Pteropus_vampyrus
ENSMODG00000002042	CPSF2	100	85.443	ENSPNYG00000023356	cpsf2	100	85.443	Pundamilia_nyererei
ENSMODG00000002042	CPSF2	100	87.039	ENSPNAG00000001849	cpsf2	100	87.039	Pygocentrus_nattereri
ENSMODG00000002042	CPSF2	100	97.954	ENSRNOG00000005733	Cpsf2	100	97.954	Rattus_norvegicus
ENSMODG00000002042	CPSF2	100	98.977	ENSRBIG00000044792	CPSF2	100	98.977	Rhinopithecus_bieti
ENSMODG00000002042	CPSF2	100	98.977	ENSRROG00000034875	CPSF2	100	98.977	Rhinopithecus_roxellana
ENSMODG00000002042	CPSF2	100	99.105	ENSSBOG00000024571	CPSF2	100	99.105	Saimiri_boliviensis_boliviensis
ENSMODG00000002042	CPSF2	100	99.872	ENSSHAG00000010458	CPSF2	100	99.872	Sarcophilus_harrisii
ENSMODG00000002042	CPSF2	100	87.421	ENSSFOG00015002117	cpsf2	100	87.421	Scleropages_formosus
ENSMODG00000002042	CPSF2	100	84.411	ENSSMAG00000002001	cpsf2	100	84.411	Scophthalmus_maximus
ENSMODG00000002042	CPSF2	100	86.312	ENSSDUG00000004084	cpsf2	100	86.312	Seriola_dumerili
ENSMODG00000002042	CPSF2	100	85.805	ENSSLDG00000024330	cpsf2	100	85.805	Seriola_lalandi_dorsalis
ENSMODG00000002042	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSMODG00000002042	CPSF2	100	96.424	ENSSPUG00000013485	CPSF2	100	96.424	Sphenodon_punctatus
ENSMODG00000002042	CPSF2	100	85.425	ENSSPAG00000013284	cpsf2	100	85.425	Stegastes_partitus
ENSMODG00000002042	CPSF2	100	98.849	ENSSSCG00000002447	CPSF2	100	98.849	Sus_scrofa
ENSMODG00000002042	CPSF2	100	97.063	ENSTGUG00000012571	-	100	97.063	Taeniopygia_guttata
ENSMODG00000002042	CPSF2	100	84.791	ENSTRUG00000003742	cpsf2	100	84.791	Takifugu_rubripes
ENSMODG00000002042	CPSF2	100	83.565	ENSTNIG00000012228	cpsf2	100	84.324	Tetraodon_nigroviridis
ENSMODG00000002042	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSMODG00000002042	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSMODG00000002042	CPSF2	100	99.105	ENSUAMG00000028071	CPSF2	100	99.105	Ursus_americanus
ENSMODG00000002042	CPSF2	100	99.105	ENSUMAG00000005029	CPSF2	100	99.105	Ursus_maritimus
ENSMODG00000002042	CPSF2	99	98.976	ENSVPAG00000003503	CPSF2	100	98.976	Vicugna_pacos
ENSMODG00000002042	CPSF2	100	98.977	ENSVVUG00000024642	CPSF2	100	98.977	Vulpes_vulpes
ENSMODG00000002042	CPSF2	100	92.720	ENSXETG00000010289	cpsf2	100	92.720	Xenopus_tropicalis
ENSMODG00000002042	CPSF2	100	85.805	ENSXCOG00000001764	cpsf2	100	85.805	Xiphophorus_couchianus
ENSMODG00000002042	CPSF2	100	85.932	ENSXMAG00000017048	cpsf2	100	85.932	Xiphophorus_maculatus