EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000002144 (Gene tree)
Gene ID: -
Gene Symbol: SF3B6
Alias: CGI-110|Ht006|P14|SAP14a|SF3B14a
Full Name: splicing factor 3b subunit 6
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 1692 bases
Position: chrUn:30685718-30687409
Accession: 100014736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000002604	RRM_1	PF00076.22	8.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000002658	SF3B6-201	1418	-	ENSMODP00000002604	125 (aa)	XP_001364306	H9H5Z7

Gene Model

Click here to download ENSMODG00000002144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000002144's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000002144	SF3B6	100	92.800	ENSG00000115128	SF3B6	100	92.800	Homo_sapiens
ENSMODG00000002144	SF3B6	100	91.200	ENSAPOG00000023788	sf3b6	100	91.200	Acanthochromis_polyacanthus
ENSMODG00000002144	SF3B6	100	92.800	ENSAMEG00000002786	SF3B6	100	92.800	Ailuropoda_melanoleuca
ENSMODG00000002144	SF3B6	100	91.200	ENSACIG00000012608	sf3b6	100	91.200	Amphilophus_citrinellus
ENSMODG00000002144	SF3B6	100	91.200	ENSAOCG00000013394	sf3b6	100	91.200	Amphiprion_ocellaris
ENSMODG00000002144	SF3B6	100	91.200	ENSAPEG00000015311	sf3b6	100	91.200	Amphiprion_percula
ENSMODG00000002144	SF3B6	100	91.200	ENSATEG00000016569	sf3b6	100	91.200	Anabas_testudineus
ENSMODG00000002144	SF3B6	100	92.800	ENSACAG00000011677	SF3B6	100	92.800	Anolis_carolinensis
ENSMODG00000002144	SF3B6	100	92.800	ENSANAG00000027284	SF3B6	95	92.800	Aotus_nancymaae
ENSMODG00000002144	SF3B6	100	91.200	ENSACLG00000007793	sf3b6	100	91.200	Astatotilapia_calliptera
ENSMODG00000002144	SF3B6	100	92.800	ENSAMXG00000034888	sf3b6	100	92.800	Astyanax_mexicanus
ENSMODG00000002144	SF3B6	100	92.800	ENSBTAG00000003407	SF3B6	100	92.800	Bos_taurus
ENSMODG00000002144	SF3B6	100	91.200	ENSBTAG00000049128	-	100	91.200	Bos_taurus
ENSMODG00000002144	SF3B6	100	63.200	WBGene00016808	C50D2.5	91	63.200	Caenorhabditis_elegans
ENSMODG00000002144	SF3B6	100	92.800	ENSCJAG00000007716	SF3B6	100	92.800	Callithrix_jacchus
ENSMODG00000002144	SF3B6	100	92.800	ENSCAFG00000003957	SF3B6	100	92.800	Canis_familiaris
ENSMODG00000002144	SF3B6	100	92.800	ENSCAFG00020025576	SF3B6	100	92.800	Canis_lupus_dingo
ENSMODG00000002144	SF3B6	100	92.800	ENSCHIG00000009902	SF3B6	100	92.800	Capra_hircus
ENSMODG00000002144	SF3B6	100	92.800	ENSTSYG00000013978	SF3B6	100	92.800	Carlito_syrichta
ENSMODG00000002144	SF3B6	97	89.256	ENSCAPG00000016302	SF3B6	99	89.256	Cavia_aperea
ENSMODG00000002144	SF3B6	100	92.800	ENSCPOG00000008016	SF3B6	100	92.800	Cavia_porcellus
ENSMODG00000002144	SF3B6	100	92.800	ENSCCAG00000036653	SF3B6	100	92.800	Cebus_capucinus
ENSMODG00000002144	SF3B6	99	87.097	ENSCCAG00000018894	-	96	87.097	Cebus_capucinus
ENSMODG00000002144	SF3B6	100	92.800	ENSCATG00000030936	SF3B6	100	92.800	Cercocebus_atys
ENSMODG00000002144	SF3B6	100	92.800	ENSCLAG00000014512	SF3B6	100	92.800	Chinchilla_lanigera
ENSMODG00000002144	SF3B6	100	92.800	ENSCSAG00000008390	SF3B6	100	92.800	Chlorocebus_sabaeus
ENSMODG00000002144	SF3B6	99	66.935	ENSCHOG00000013886	-	99	66.935	Choloepus_hoffmanni
ENSMODG00000002144	SF3B6	100	92.800	ENSCHOG00000000689	SF3B6	100	92.800	Choloepus_hoffmanni
ENSMODG00000002144	SF3B6	100	92.800	ENSCPBG00000020042	SF3B6	100	92.800	Chrysemys_picta_bellii
ENSMODG00000002144	SF3B6	98	73.984	ENSCING00000012689	-	97	73.984	Ciona_intestinalis
ENSMODG00000002144	SF3B6	100	92.800	ENSCANG00000030559	SF3B6	100	92.800	Colobus_angolensis_palliatus
ENSMODG00000002144	SF3B6	100	92.800	ENSCGRG00001014595	Sf3b6	100	92.800	Cricetulus_griseus_chok1gshd
ENSMODG00000002144	SF3B6	100	92.800	ENSCGRG00000005272	Sf3b6	100	92.800	Cricetulus_griseus_crigri
ENSMODG00000002144	SF3B6	100	90.400	ENSCSEG00000019017	sf3b6	100	90.400	Cynoglossus_semilaevis
ENSMODG00000002144	SF3B6	100	92.000	ENSCVAG00000005055	sf3b6	100	92.000	Cyprinodon_variegatus
ENSMODG00000002144	SF3B6	100	92.800	ENSDARG00000009753	sf3b6	100	92.800	Danio_rerio
ENSMODG00000002144	SF3B6	100	92.800	ENSDNOG00000007148	SF3B6	100	92.800	Dasypus_novemcinctus
ENSMODG00000002144	SF3B6	99	80.952	ENSDORG00000027390	-	98	80.952	Dipodomys_ordii
ENSMODG00000002144	SF3B6	99	80.952	ENSDORG00000029761	-	98	80.952	Dipodomys_ordii
ENSMODG00000002144	SF3B6	100	92.800	ENSDORG00000009772	Sf3b6	100	92.800	Dipodomys_ordii
ENSMODG00000002144	SF3B6	92	72.174	FBgn0035692	Sf3b6	95	72.174	Drosophila_melanogaster
ENSMODG00000002144	SF3B6	92	85.217	ENSEBUG00000004424	sf3b6	91	85.217	Eptatretus_burgeri
ENSMODG00000002144	SF3B6	100	83.200	ENSEASG00005008061	-	100	83.200	Equus_asinus_asinus
ENSMODG00000002144	SF3B6	100	92.800	ENSEASG00005009993	SF3B6	100	92.800	Equus_asinus_asinus
ENSMODG00000002144	SF3B6	69	100.000	ENSECAG00000015618	SF3B6	79	100.000	Equus_caballus
ENSMODG00000002144	SF3B6	69	90.698	ENSECAG00000027755	-	74	90.698	Equus_caballus
ENSMODG00000002144	SF3B6	100	91.200	ENSELUG00000010379	sf3b6	100	91.200	Esox_lucius
ENSMODG00000002144	SF3B6	100	92.800	ENSFCAG00000031365	SF3B6	100	92.800	Felis_catus
ENSMODG00000002144	SF3B6	100	92.800	ENSFALG00000001651	SF3B6	100	92.800	Ficedula_albicollis
ENSMODG00000002144	SF3B6	100	92.800	ENSFDAG00000007864	SF3B6	100	92.800	Fukomys_damarensis
ENSMODG00000002144	SF3B6	100	92.000	ENSFHEG00000000685	sf3b6	100	92.000	Fundulus_heteroclitus
ENSMODG00000002144	SF3B6	100	90.400	ENSGMOG00000005123	sf3b6	100	90.400	Gadus_morhua
ENSMODG00000002144	SF3B6	73	90.110	ENSGALG00000016501	SF3B6	100	90.110	Gallus_gallus
ENSMODG00000002144	SF3B6	100	91.200	ENSGAFG00000009334	sf3b6	100	91.200	Gambusia_affinis
ENSMODG00000002144	SF3B6	100	90.400	ENSGACG00000004803	sf3b6	100	90.400	Gasterosteus_aculeatus
ENSMODG00000002144	SF3B6	100	92.800	ENSGAGG00000012240	SF3B6	100	92.800	Gopherus_agassizii
ENSMODG00000002144	SF3B6	100	92.800	ENSGGOG00000040806	SF3B6	100	92.800	Gorilla_gorilla
ENSMODG00000002144	SF3B6	100	91.200	ENSHBUG00000012556	sf3b6	100	91.200	Haplochromis_burtoni
ENSMODG00000002144	SF3B6	100	92.800	ENSHGLG00000014895	SF3B14	100	92.800	Heterocephalus_glaber_female
ENSMODG00000002144	SF3B6	100	92.800	ENSHGLG00100008639	SF3B14	100	92.800	Heterocephalus_glaber_male
ENSMODG00000002144	SF3B6	100	92.000	ENSHCOG00000019962	sf3b6	100	92.000	Hippocampus_comes
ENSMODG00000002144	SF3B6	100	92.800	ENSIPUG00000023800	sf3b6	100	92.800	Ictalurus_punctatus
ENSMODG00000002144	SF3B6	100	92.800	ENSJJAG00000021819	Sf3b6	100	92.800	Jaculus_jaculus
ENSMODG00000002144	SF3B6	100	91.200	ENSKMAG00000004000	sf3b6	100	91.200	Kryptolebias_marmoratus
ENSMODG00000002144	SF3B6	100	91.200	ENSLBEG00000022937	sf3b6	100	91.200	Labrus_bergylta
ENSMODG00000002144	SF3B6	100	92.800	ENSLACG00000014326	SF3B6	100	92.800	Latimeria_chalumnae
ENSMODG00000002144	SF3B6	100	92.800	ENSLOCG00000016481	sf3b6	100	92.800	Lepisosteus_oculatus
ENSMODG00000002144	SF3B6	100	92.800	ENSLAFG00000029423	SF3B6	100	92.800	Loxodonta_africana
ENSMODG00000002144	SF3B6	100	92.800	ENSMFAG00000038178	SF3B6	100	92.800	Macaca_fascicularis
ENSMODG00000002144	SF3B6	100	92.800	ENSMMUG00000001282	SF3B6	100	92.800	Macaca_mulatta
ENSMODG00000002144	SF3B6	100	92.800	ENSMNEG00000029050	SF3B6	100	92.800	Macaca_nemestrina
ENSMODG00000002144	SF3B6	100	92.800	ENSMLEG00000019896	SF3B6	100	92.800	Mandrillus_leucophaeus
ENSMODG00000002144	SF3B6	69	97.674	ENSMAMG00000007713	sf3b6	78	97.674	Mastacembelus_armatus
ENSMODG00000002144	SF3B6	100	91.200	ENSMZEG00005003557	sf3b6	100	91.200	Maylandia_zebra
ENSMODG00000002144	SF3B6	100	92.800	ENSMGAG00000014057	SF3B6	100	92.800	Meleagris_gallopavo
ENSMODG00000002144	SF3B6	100	92.800	ENSMAUG00000000586	-	100	92.800	Mesocricetus_auratus
ENSMODG00000002144	SF3B6	100	92.800	ENSMICG00000032874	SF3B6	100	92.800	Microcebus_murinus
ENSMODG00000002144	SF3B6	100	92.800	ENSMOCG00000014338	Sf3b6	100	92.800	Microtus_ochrogaster
ENSMODG00000002144	SF3B6	100	92.000	ENSMMOG00000015653	sf3b6	100	92.000	Mola_mola
ENSMODG00000002144	SF3B6	100	92.000	ENSMALG00000019642	sf3b6	67	92.000	Monopterus_albus
ENSMODG00000002144	SF3B6	100	92.800	MGP_CAROLIEiJ_G0017590	Sf3b6	100	92.800	Mus_caroli
ENSMODG00000002144	SF3B6	100	92.800	ENSMUSG00000037361	Sf3b6	100	92.800	Mus_musculus
ENSMODG00000002144	SF3B6	100	92.800	MGP_PahariEiJ_G0029348	Sf3b6	100	92.800	Mus_pahari
ENSMODG00000002144	SF3B6	100	92.800	MGP_SPRETEiJ_G0018434	Sf3b6	100	92.800	Mus_spretus
ENSMODG00000002144	SF3B6	100	92.800	ENSMPUG00000013957	SF3B6	100	92.800	Mustela_putorius_furo
ENSMODG00000002144	SF3B6	100	91.200	ENSMLUG00000002473	SF3B6	100	91.200	Myotis_lucifugus
ENSMODG00000002144	SF3B6	100	92.800	ENSNGAG00000020256	Sf3b6	100	92.800	Nannospalax_galili
ENSMODG00000002144	SF3B6	100	91.200	ENSNBRG00000018244	sf3b6	100	91.200	Neolamprologus_brichardi
ENSMODG00000002144	SF3B6	100	92.800	ENSNLEG00000000815	-	100	92.800	Nomascus_leucogenys
ENSMODG00000002144	SF3B6	87	91.743	ENSODEG00000009547	SF3B6	92	91.743	Octodon_degus
ENSMODG00000002144	SF3B6	100	91.200	ENSONIG00000001219	sf3b6	100	91.200	Oreochromis_niloticus
ENSMODG00000002144	SF3B6	100	92.800	ENSOANG00000007627	SF3B6	100	92.800	Ornithorhynchus_anatinus
ENSMODG00000002144	SF3B6	100	92.800	ENSOCUG00000022008	SF3B6	100	92.800	Oryctolagus_cuniculus
ENSMODG00000002144	SF3B6	100	91.200	ENSORLG00000015955	sf3b6	100	91.200	Oryzias_latipes
ENSMODG00000002144	SF3B6	100	91.200	ENSORLG00020005875	sf3b6	100	91.200	Oryzias_latipes_hni
ENSMODG00000002144	SF3B6	100	91.200	ENSORLG00015001347	sf3b6	100	91.200	Oryzias_latipes_hsok
ENSMODG00000002144	SF3B6	100	91.200	ENSOMEG00000014506	sf3b6	100	91.200	Oryzias_melastigma
ENSMODG00000002144	SF3B6	100	92.800	ENSOGAG00000004468	SF3B6	100	92.800	Otolemur_garnettii
ENSMODG00000002144	SF3B6	100	92.800	ENSOARG00000017819	SF3B6	100	92.800	Ovis_aries
ENSMODG00000002144	SF3B6	100	92.800	ENSPPAG00000027816	SF3B6	100	92.800	Pan_paniscus
ENSMODG00000002144	SF3B6	100	92.800	ENSPPRG00000023257	SF3B6	100	92.800	Panthera_pardus
ENSMODG00000002144	SF3B6	100	92.800	ENSPTIG00000013322	SF3B6	100	92.800	Panthera_tigris_altaica
ENSMODG00000002144	SF3B6	100	92.800	ENSPTRG00000011709	SF3B6	100	92.800	Pan_troglodytes
ENSMODG00000002144	SF3B6	100	92.800	ENSPANG00000021963	SF3B6	100	92.800	Papio_anubis
ENSMODG00000002144	SF3B6	100	92.800	ENSPKIG00000012311	sf3b6	100	92.800	Paramormyrops_kingsleyae
ENSMODG00000002144	SF3B6	92	92.174	ENSPSIG00000017115	SF3B6	100	92.174	Pelodiscus_sinensis
ENSMODG00000002144	SF3B6	69	97.674	ENSPMGG00000014621	sf3b6	72	97.674	Periophthalmus_magnuspinnatus
ENSMODG00000002144	SF3B6	100	92.800	ENSPEMG00000010308	Sf3b6	100	92.800	Peromyscus_maniculatus_bairdii
ENSMODG00000002144	SF3B6	94	81.356	ENSPMAG00000006008	sf3b6	94	81.356	Petromyzon_marinus
ENSMODG00000002144	SF3B6	99	74.194	ENSPCIG00000015858	-	99	74.194	Phascolarctos_cinereus
ENSMODG00000002144	SF3B6	100	92.800	ENSPCIG00000022128	-	100	92.800	Phascolarctos_cinereus
ENSMODG00000002144	SF3B6	100	91.200	ENSPFOG00000012494	sf3b6	100	91.200	Poecilia_formosa
ENSMODG00000002144	SF3B6	100	91.200	ENSPLAG00000020460	sf3b6	100	91.200	Poecilia_latipinna
ENSMODG00000002144	SF3B6	100	91.200	ENSPMEG00000004426	sf3b6	100	91.200	Poecilia_mexicana
ENSMODG00000002144	SF3B6	100	92.800	ENSPPYG00000012603	SF3B6	100	92.800	Pongo_abelii
ENSMODG00000002144	SF3B6	100	92.800	ENSPVAG00000011346	SF3B6	100	92.800	Pteropus_vampyrus
ENSMODG00000002144	SF3B6	100	91.200	ENSPNYG00000021832	sf3b6	100	91.200	Pundamilia_nyererei
ENSMODG00000002144	SF3B6	100	92.800	ENSPNAG00000008845	sf3b6	100	92.800	Pygocentrus_nattereri
ENSMODG00000002144	SF3B6	100	82.400	ENSRNOG00000046172	Sf3b6	100	82.400	Rattus_norvegicus
ENSMODG00000002144	SF3B6	100	92.800	ENSRBIG00000039598	SF3B6	100	92.800	Rhinopithecus_bieti
ENSMODG00000002144	SF3B6	100	92.800	ENSRROG00000011368	SF3B6	100	92.800	Rhinopithecus_roxellana
ENSMODG00000002144	SF3B6	100	92.800	ENSSBOG00000002914	SF3B6	100	92.800	Saimiri_boliviensis_boliviensis
ENSMODG00000002144	SF3B6	100	92.800	ENSSFOG00015014370	sf3b6	100	92.800	Scleropages_formosus
ENSMODG00000002144	SF3B6	100	91.200	ENSSMAG00000004566	sf3b6	100	91.200	Scophthalmus_maximus
ENSMODG00000002144	SF3B6	100	91.200	ENSSDUG00000006538	sf3b6	100	91.200	Seriola_dumerili
ENSMODG00000002144	SF3B6	100	91.200	ENSSLDG00000004494	sf3b6	100	91.200	Seriola_lalandi_dorsalis
ENSMODG00000002144	SF3B6	100	92.800	ENSSARG00000011902	-	100	92.800	Sorex_araneus
ENSMODG00000002144	SF3B6	100	92.800	ENSSPUG00000014919	SF3B6	100	92.800	Sphenodon_punctatus
ENSMODG00000002144	SF3B6	100	91.200	ENSSPAG00000013201	sf3b6	100	91.200	Stegastes_partitus
ENSMODG00000002144	SF3B6	100	92.800	ENSSSCG00000008587	SF3B6	100	92.800	Sus_scrofa
ENSMODG00000002144	SF3B6	100	92.800	ENSTGUG00000013191	SF3B6	100	92.800	Taeniopygia_guttata
ENSMODG00000002144	SF3B6	100	91.200	ENSTRUG00000025286	sf3b6	100	91.200	Takifugu_rubripes
ENSMODG00000002144	SF3B6	100	91.200	ENSTNIG00000009719	sf3b6	100	91.200	Tetraodon_nigroviridis
ENSMODG00000002144	SF3B6	92	92.174	ENSTBEG00000012532	SF3B6	100	92.174	Tupaia_belangeri
ENSMODG00000002144	SF3B6	92	92.174	ENSTTRG00000013430	SF3B6	100	92.174	Tursiops_truncatus
ENSMODG00000002144	SF3B6	100	92.800	ENSUAMG00000025329	SF3B6	100	92.800	Ursus_americanus
ENSMODG00000002144	SF3B6	100	76.984	ENSUAMG00000000978	-	100	76.984	Ursus_americanus
ENSMODG00000002144	SF3B6	100	92.800	ENSUMAG00000022835	SF3B6	100	92.800	Ursus_maritimus
ENSMODG00000002144	SF3B6	92	92.174	ENSVPAG00000005546	SF3B6	100	92.174	Vicugna_pacos
ENSMODG00000002144	SF3B6	100	92.800	ENSVVUG00000010874	SF3B6	100	92.800	Vulpes_vulpes
ENSMODG00000002144	SF3B6	100	92.000	ENSXETG00000018204	sf3b6	100	92.000	Xenopus_tropicalis
ENSMODG00000002144	SF3B6	69	97.674	ENSXCOG00000008477	sf3b6	67	97.674	Xiphophorus_couchianus
ENSMODG00000002144	SF3B6	100	91.200	ENSXMAG00000010747	sf3b6	100	91.200	Xiphophorus_maculatus