EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000002238 (Gene tree)
Gene ID: 100029003
Gene Symbol: -
Alias: -
Full Name: lysine--tRNA ligase-like
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 28148 bases
Position: chr1:703569937-703598084
Accession: 100029003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000002726	tRNA_anti-codon	PF01336.25	2e-14	1	1
ENSMODP00000002726	tRNA-synt_2	PF00152.20	4.8e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000002781	-	1827	-	ENSMODP00000002726	608 (aa)	XP_001378881	F7DFS1

Gene Model

Click here to download ENSMODG00000002238's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000002238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000002238	-	91	85.891	ENSMODG00000002215	-	99	85.891

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000002238	-	99	80.096	ENSG00000065427	KARS	99	93.069	Homo_sapiens
ENSMODG00000002238	-	92	75.177	ENSAPOG00000010997	kars	98	75.000	Acanthochromis_polyacanthus
ENSMODG00000002238	-	98	80.424	ENSAMEG00000005347	KARS	98	81.240	Ailuropoda_melanoleuca
ENSMODG00000002238	-	97	67.047	ENSACIG00000000304	kars	99	67.047	Amphilophus_citrinellus
ENSMODG00000002238	-	88	78.424	ENSAOCG00000012971	kars	95	75.963	Amphiprion_ocellaris
ENSMODG00000002238	-	88	78.236	ENSAPEG00000011144	kars	96	76.259	Amphiprion_percula
ENSMODG00000002238	-	98	71.429	ENSATEG00000004954	kars	99	74.479	Anabas_testudineus
ENSMODG00000002238	-	86	78.731	ENSAPLG00000012705	KARS	97	78.731	Anas_platyrhynchos
ENSMODG00000002238	-	87	80.303	ENSACAG00000007577	KARS	88	77.102	Anolis_carolinensis
ENSMODG00000002238	-	99	80.738	ENSANAG00000030403	-	99	80.738	Aotus_nancymaae
ENSMODG00000002238	-	94	69.618	ENSANAG00000031739	-	95	69.965	Aotus_nancymaae
ENSMODG00000002238	-	92	75.395	ENSACLG00000001613	kars	96	75.220	Astatotilapia_calliptera
ENSMODG00000002238	-	90	75.936	ENSAMXG00000030719	kars	97	75.758	Astyanax_mexicanus
ENSMODG00000002238	-	91	84.683	ENSBTAG00000015677	KARS	73	84.683	Bos_taurus
ENSMODG00000002238	-	85	61.583	WBGene00002238	kars-1	99	61.840	Caenorhabditis_elegans
ENSMODG00000002238	-	99	79.775	ENSCJAG00000014213	KARS	97	83.363	Callithrix_jacchus
ENSMODG00000002238	-	97	82.043	ENSCAFG00000020069	KARS	97	82.867	Canis_familiaris
ENSMODG00000002238	-	97	82.043	ENSCAFG00020001721	KARS	97	82.867	Canis_lupus_dingo
ENSMODG00000002238	-	93	82.862	ENSCHIG00000016073	-	94	82.862	Capra_hircus
ENSMODG00000002238	-	99	82.201	ENSCHIG00000014108	-	99	82.201	Capra_hircus
ENSMODG00000002238	-	98	82.459	ENSTSYG00000001643	KARS	97	83.601	Carlito_syrichta
ENSMODG00000002238	-	99	75.723	ENSCAPG00000016234	KARS	99	75.850	Cavia_aperea
ENSMODG00000002238	-	99	81.350	ENSCPOG00000012036	KARS	99	81.350	Cavia_porcellus
ENSMODG00000002238	-	99	80.257	ENSCCAG00000034307	-	99	81.059	Cebus_capucinus
ENSMODG00000002238	-	89	66.545	ENSCCAG00000030337	-	98	68.704	Cebus_capucinus
ENSMODG00000002238	-	99	80.128	ENSCATG00000038129	KARS	99	80.128	Cercocebus_atys
ENSMODG00000002238	-	98	81.566	ENSCLAG00000007905	KARS	98	81.566	Chinchilla_lanigera
ENSMODG00000002238	-	99	80.417	ENSCSAG00000003664	KARS	99	80.417	Chlorocebus_sabaeus
ENSMODG00000002238	-	84	87.527	ENSCHOG00000013447	KARS	82	87.527	Choloepus_hoffmanni
ENSMODG00000002238	-	98	75.693	ENSCPBG00000026969	KARS	99	75.693	Chrysemys_picta_bellii
ENSMODG00000002238	-	84	72.461	ENSCPBG00000002553	-	93	72.461	Chrysemys_picta_bellii
ENSMODG00000002238	-	84	69.922	ENSCING00000009513	-	96	65.942	Ciona_intestinalis
ENSMODG00000002238	-	52	68.339	ENSCSAVG00000001136	-	96	72.000	Ciona_savignyi
ENSMODG00000002238	-	84	70.117	ENSCSAVG00000007684	-	97	65.832	Ciona_savignyi
ENSMODG00000002238	-	99	76.404	ENSCANG00000032813	KARS	99	76.404	Colobus_angolensis_palliatus
ENSMODG00000002238	-	98	81.107	ENSCGRG00001004055	KARS	98	81.107	Cricetulus_griseus_chok1gshd
ENSMODG00000002238	-	98	81.107	ENSCGRG00000014242	KARS	98	81.107	Cricetulus_griseus_crigri
ENSMODG00000002238	-	96	71.849	ENSCSEG00000008324	kars	96	75.936	Cynoglossus_semilaevis
ENSMODG00000002238	-	87	77.083	ENSCVAG00000019686	kars	98	73.158	Cyprinodon_variegatus
ENSMODG00000002238	-	88	80.000	ENSDARG00000103799	kars	98	82.772	Danio_rerio
ENSMODG00000002238	-	99	81.220	ENSDNOG00000002241	KARS	99	82.022	Dasypus_novemcinctus
ENSMODG00000002238	-	88	64.899	ENSDORG00000024214	-	90	67.170	Dipodomys_ordii
ENSMODG00000002238	-	97	83.196	ENSDORG00000004780	-	97	83.196	Dipodomys_ordii
ENSMODG00000002238	-	86	69.025	FBgn0027084	LysRS	98	65.893	Drosophila_melanogaster
ENSMODG00000002238	-	100	79.840	ENSETEG00000008353	KARS	99	79.840	Echinops_telfairi
ENSMODG00000002238	-	89	69.581	ENSEBUG00000001284	-	90	71.374	Eptatretus_burgeri
ENSMODG00000002238	-	97	82.479	ENSEASG00005013497	KARS	97	82.479	Equus_asinus_asinus
ENSMODG00000002238	-	89	84.409	ENSECAG00000013424	KARS	93	84.409	Equus_caballus
ENSMODG00000002238	-	97	75.822	ENSEEUG00000007042	KARS	98	75.490	Erinaceus_europaeus
ENSMODG00000002238	-	90	70.384	ENSELUG00000014575	kars	97	68.893	Esox_lucius
ENSMODG00000002238	-	97	82.043	ENSFCAG00000008573	KARS	99	81.220	Felis_catus
ENSMODG00000002238	-	89	81.250	ENSFALG00000002543	KARS	92	81.250	Ficedula_albicollis
ENSMODG00000002238	-	99	80.578	ENSFDAG00000007155	KARS	99	80.899	Fukomys_damarensis
ENSMODG00000002238	-	86	78.053	ENSFHEG00000006172	kars	98	73.860	Fundulus_heteroclitus
ENSMODG00000002238	-	91	73.333	ENSGMOG00000002633	kars	93	73.509	Gadus_morhua
ENSMODG00000002238	-	89	81.516	ENSGALG00000000907	KARS	94	81.516	Gallus_gallus
ENSMODG00000002238	-	93	73.565	ENSGAFG00000017252	kars	99	73.913	Gambusia_affinis
ENSMODG00000002238	-	92	74.286	ENSGACG00000015749	kars	93	74.286	Gasterosteus_aculeatus
ENSMODG00000002238	-	84	72.461	ENSGAGG00000011960	-	95	72.781	Gopherus_agassizii
ENSMODG00000002238	-	92	79.893	ENSGAGG00000023836	KARS	99	75.856	Gopherus_agassizii
ENSMODG00000002238	-	99	79.936	ENSGGOG00000005515	KARS	99	80.738	Gorilla_gorilla
ENSMODG00000002238	-	92	75.395	ENSHBUG00000013619	kars	96	75.220	Haplochromis_burtoni
ENSMODG00000002238	-	92	74.597	ENSHGLG00000015235	-	94	74.955	Heterocephalus_glaber_female
ENSMODG00000002238	-	97	82.372	ENSHGLG00000011898	KARS	96	84.505	Heterocephalus_glaber_female
ENSMODG00000002238	-	94	67.764	ENSHGLG00000001298	-	95	67.764	Heterocephalus_glaber_female
ENSMODG00000002238	-	94	67.591	ENSHGLG00100006466	-	95	67.591	Heterocephalus_glaber_male
ENSMODG00000002238	-	92	73.264	ENSHGLG00100012523	-	93	79.596	Heterocephalus_glaber_male
ENSMODG00000002238	-	97	82.372	ENSHGLG00100012264	KARS	97	82.372	Heterocephalus_glaber_male
ENSMODG00000002238	-	92	73.997	ENSHCOG00000002900	kars	95	73.997	Hippocampus_comes
ENSMODG00000002238	-	89	77.407	ENSIPUG00000009862	kars	98	74.735	Ictalurus_punctatus
ENSMODG00000002238	-	99	80.738	ENSSTOG00000004205	KARS	99	81.541	Ictidomys_tridecemlineatus
ENSMODG00000002238	-	98	80.813	ENSJJAG00000020406	Kars	99	81.789	Jaculus_jaculus
ENSMODG00000002238	-	92	75.401	ENSKMAG00000006434	kars	96	75.401	Kryptolebias_marmoratus
ENSMODG00000002238	-	92	75.448	ENSLBEG00000026537	kars	92	75.448	Labrus_bergylta
ENSMODG00000002238	-	83	72.925	ENSLACG00000016399	-	99	72.925	Latimeria_chalumnae
ENSMODG00000002238	-	98	74.225	ENSLACG00000006667	KARS	99	74.225	Latimeria_chalumnae
ENSMODG00000002238	-	91	77.193	ENSLOCG00000004002	kars	98	77.193	Lepisosteus_oculatus
ENSMODG00000002238	-	87	70.019	ENSLOCG00000013608	-	95	70.019	Lepisosteus_oculatus
ENSMODG00000002238	-	97	81.281	ENSLAFG00000015340	KARS	98	81.281	Loxodonta_africana
ENSMODG00000002238	-	99	80.257	ENSMFAG00000040024	KARS	99	80.257	Macaca_fascicularis
ENSMODG00000002238	-	99	79.294	ENSMNEG00000042879	-	99	79.294	Macaca_nemestrina
ENSMODG00000002238	-	79	82.258	ENSMNEG00000035832	-	95	82.258	Macaca_nemestrina
ENSMODG00000002238	-	99	80.257	ENSMLEG00000034947	KARS	99	80.257	Mandrillus_leucophaeus
ENSMODG00000002238	-	95	72.500	ENSMAMG00000021559	kars	98	72.500	Mastacembelus_armatus
ENSMODG00000002238	-	92	75.395	ENSMZEG00005014382	kars	96	75.220	Maylandia_zebra
ENSMODG00000002238	-	98	72.698	ENSMGAG00000009000	KARS	97	79.228	Meleagris_gallopavo
ENSMODG00000002238	-	99	80.578	ENSMICG00000011997	KARS	99	80.578	Microcebus_murinus
ENSMODG00000002238	-	99	80.937	ENSMOCG00000011829	Kars	99	80.937	Microtus_ochrogaster
ENSMODG00000002238	-	91	82.130	ENSMOCG00000019029	-	93	82.130	Microtus_ochrogaster
ENSMODG00000002238	-	89	78.108	ENSMMOG00000016934	kars	100	75.972	Mola_mola
ENSMODG00000002238	-	94	72.896	ENSMALG00000020858	kars	97	75.536	Monopterus_albus
ENSMODG00000002238	-	83	86.992	MGP_CAROLIEiJ_G0031588	Kars	98	86.992	Mus_caroli
ENSMODG00000002238	-	99	81.981	ENSMUSG00000031948	Kars	99	81.981	Mus_musculus
ENSMODG00000002238	-	93	83.894	MGP_PahariEiJ_G0023186	Kars	95	83.894	Mus_pahari
ENSMODG00000002238	-	99	81.981	MGP_SPRETEiJ_G0032706	Kars	99	81.981	Mus_spretus
ENSMODG00000002238	-	99	79.936	ENSMPUG00000009871	KARS	99	80.738	Mustela_putorius_furo
ENSMODG00000002238	-	61	55.968	ENSMLUG00000026871	-	76	55.968	Myotis_lucifugus
ENSMODG00000002238	-	98	80.976	ENSMLUG00000015119	-	99	80.976	Myotis_lucifugus
ENSMODG00000002238	-	87	82.752	ENSNGAG00000022944	-	93	82.752	Nannospalax_galili
ENSMODG00000002238	-	92	82.261	ENSNGAG00000018820	-	97	82.261	Nannospalax_galili
ENSMODG00000002238	-	90	77.106	ENSNBRG00000011098	kars	96	75.220	Neolamprologus_brichardi
ENSMODG00000002238	-	99	79.615	ENSNLEG00000013072	KARS	99	80.417	Nomascus_leucogenys
ENSMODG00000002238	-	99	89.109	ENSMEUG00000008684	KARS	99	89.109	Notamacropus_eugenii
ENSMODG00000002238	-	98	81.475	ENSOPRG00000012544	KARS	99	81.475	Ochotona_princeps
ENSMODG00000002238	-	99	80.578	ENSODEG00000013099	-	99	82.087	Octodon_degus
ENSMODG00000002238	-	92	59.612	ENSODEG00000009464	-	99	59.612	Octodon_degus
ENSMODG00000002238	-	87	78.977	ENSONIG00000005937	kars	97	75.220	Oreochromis_niloticus
ENSMODG00000002238	-	95	82.353	ENSOANG00000008179	KARS	97	82.353	Ornithorhynchus_anatinus
ENSMODG00000002238	-	92	74.306	ENSOCUG00000015553	KARS	96	75.000	Oryctolagus_cuniculus
ENSMODG00000002238	-	89	76.697	ENSORLG00000007627	kars	91	75.045	Oryzias_latipes
ENSMODG00000002238	-	89	76.330	ENSORLG00020010056	kars	91	74.688	Oryzias_latipes_hni
ENSMODG00000002238	-	86	79.079	ENSORLG00015008179	kars	91	74.510	Oryzias_latipes_hsok
ENSMODG00000002238	-	84	79.922	ENSOMEG00000001710	kars	95	75.407	Oryzias_melastigma
ENSMODG00000002238	-	99	74.799	ENSOGAG00000005903	KARS	99	74.799	Otolemur_garnettii
ENSMODG00000002238	-	86	84.924	ENSOARG00000006928	KARS	92	84.924	Ovis_aries
ENSMODG00000002238	-	99	79.615	ENSPPAG00000036192	KARS	99	80.417	Pan_paniscus
ENSMODG00000002238	-	97	81.713	ENSPPRG00000003027	KARS	99	80.899	Panthera_pardus
ENSMODG00000002238	-	97	81.878	ENSPTIG00000008011	KARS	99	81.059	Panthera_tigris_altaica
ENSMODG00000002238	-	99	79.936	ENSPTRG00000008364	KARS	99	80.738	Pan_troglodytes
ENSMODG00000002238	-	99	80.417	ENSPANG00000024106	KARS	99	80.417	Papio_anubis
ENSMODG00000002238	-	85	80.620	ENSPKIG00000009896	kars	98	75.571	Paramormyrops_kingsleyae
ENSMODG00000002238	-	84	73.489	ENSPSIG00000003041	-	94	73.489	Pelodiscus_sinensis
ENSMODG00000002238	-	89	79.892	ENSPSIG00000009294	KARS	96	80.251	Pelodiscus_sinensis
ENSMODG00000002238	-	85	80.388	ENSPMGG00000006117	kars	98	76.036	Periophthalmus_magnuspinnatus
ENSMODG00000002238	-	99	80.968	ENSPEMG00000012277	Kars	99	80.968	Peromyscus_maniculatus_bairdii
ENSMODG00000002238	-	99	66.828	ENSPMAG00000008360	-	99	66.345	Petromyzon_marinus
ENSMODG00000002238	-	99	89.034	ENSPCIG00000025469	-	99	89.034	Phascolarctos_cinereus
ENSMODG00000002238	-	92	84.896	ENSPCIG00000010761	-	97	84.896	Phascolarctos_cinereus
ENSMODG00000002238	-	89	77.122	ENSPFOG00000013253	kars	92	75.000	Poecilia_formosa
ENSMODG00000002238	-	89	77.122	ENSPLAG00000004189	kars	99	73.288	Poecilia_latipinna
ENSMODG00000002238	-	89	77.306	ENSPMEG00000015698	kars	99	73.459	Poecilia_mexicana
ENSMODG00000002238	-	85	79.151	ENSPREG00000023179	kars	99	73.391	Poecilia_reticulata
ENSMODG00000002238	-	99	79.775	ENSPPYG00000007567	KARS	99	80.578	Pongo_abelii
ENSMODG00000002238	-	86	77.351	ENSPCAG00000010790	KARS	99	77.351	Procavia_capensis
ENSMODG00000002238	-	99	74.917	ENSPCOG00000003166	KARS	99	74.917	Propithecus_coquereli
ENSMODG00000002238	-	97	81.773	ENSPVAG00000006746	KARS	97	81.773	Pteropus_vampyrus
ENSMODG00000002238	-	92	75.395	ENSPNYG00000013095	kars	96	75.220	Pundamilia_nyererei
ENSMODG00000002238	-	91	77.698	ENSPNAG00000013828	kars	95	77.698	Pygocentrus_nattereri
ENSMODG00000002238	-	99	80.583	ENSRNOG00000019456	Kars	99	81.392	Rattus_norvegicus
ENSMODG00000002238	-	99	79.808	ENSRBIG00000030118	KARS	99	79.808	Rhinopithecus_bieti
ENSMODG00000002238	-	99	80.257	ENSRROG00000041418	KARS	99	80.257	Rhinopithecus_roxellana
ENSMODG00000002238	-	83	59.649	YDR037W	KRS1	96	55.712	Saccharomyces_cerevisiae
ENSMODG00000002238	-	75	33.060	YNL073W	-	83	33.060	Saccharomyces_cerevisiae
ENSMODG00000002238	-	99	80.096	ENSSBOG00000019255	KARS	99	83.363	Saimiri_boliviensis_boliviensis
ENSMODG00000002238	-	91	80.070	ENSSHAG00000001359	-	99	80.070	Sarcophilus_harrisii
ENSMODG00000002238	-	90	82.364	ENSSHAG00000009005	-	99	82.364	Sarcophilus_harrisii
ENSMODG00000002238	-	100	76.623	ENSSHAG00000002050	-	100	76.623	Sarcophilus_harrisii
ENSMODG00000002238	-	90	76.460	ENSSFOG00015014837	kars	98	76.460	Scleropages_formosus
ENSMODG00000002238	-	93	74.826	ENSSMAG00000021441	kars	99	74.826	Scophthalmus_maximus
ENSMODG00000002238	-	88	78.585	ENSSDUG00000001202	kars	99	75.000	Seriola_dumerili
ENSMODG00000002238	-	90	76.565	ENSSLDG00000021220	kars	97	76.923	Seriola_lalandi_dorsalis
ENSMODG00000002238	-	72	79.580	ENSSARG00000011493	KARS	78	81.515	Sorex_araneus
ENSMODG00000002238	-	93	76.027	ENSSPUG00000004974	KARS	98	75.680	Sphenodon_punctatus
ENSMODG00000002238	-	61	64.324	ENSSPUG00000000449	-	86	64.324	Sphenodon_punctatus
ENSMODG00000002238	-	91	75.856	ENSSPAG00000020365	kars	96	74.472	Stegastes_partitus
ENSMODG00000002238	-	99	80.323	ENSSSCG00000002704	KARS	99	81.129	Sus_scrofa
ENSMODG00000002238	-	89	80.961	ENSTGUG00000008400	KARS	96	80.961	Taeniopygia_guttata
ENSMODG00000002238	-	88	77.674	ENSTRUG00000017551	kars	93	75.806	Takifugu_rubripes
ENSMODG00000002238	-	87	78.368	ENSTNIG00000009351	kars	98	75.044	Tetraodon_nigroviridis
ENSMODG00000002238	-	94	64.273	ENSTBEG00000004610	KARS	99	64.273	Tupaia_belangeri
ENSMODG00000002238	-	98	80.424	ENSTTRG00000001221	KARS	98	80.424	Tursiops_truncatus
ENSMODG00000002238	-	98	80.587	ENSUAMG00000017557	KARS	98	80.914	Ursus_americanus
ENSMODG00000002238	-	98	80.587	ENSUMAG00000014559	KARS	98	80.914	Ursus_maritimus
ENSMODG00000002238	-	99	79.839	ENSVPAG00000003716	KARS	99	80.484	Vicugna_pacos
ENSMODG00000002238	-	97	81.878	ENSVVUG00000024338	KARS	97	84.810	Vulpes_vulpes
ENSMODG00000002238	-	96	73.187	ENSXETG00000003569	kars	97	75.089	Xenopus_tropicalis
ENSMODG00000002238	-	85	79.537	ENSXCOG00000011313	kars	99	75.448	Xiphophorus_couchianus
ENSMODG00000002238	-	93	73.217	ENSXMAG00000003191	kars	99	73.565	Xiphophorus_maculatus