EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000002275 (Gene tree)
Gene ID: 100017417
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 245691 bases
Position: chr4:64176624-64422314
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000002778	CMS1	PF14617.6	1.7e-33	1	1
ENSMODP00000002778	DEAD	PF00270.29	5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000002833	CMSS1-201	1865	-	ENSMODP00000002778	265 (aa)	-	F7CVV8

Gene Model

Click here to download ENSMODG00000002275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000002275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000002275	CMSS1	98	71.756	ENSG00000184220	CMSS1	99	79.012	Homo_sapiens
ENSMODG00000002275	CMSS1	76	64.356	ENSAPOG00000010604	cmss1	82	64.356	Acanthochromis_polyacanthus
ENSMODG00000002275	CMSS1	95	74.510	ENSAMEG00000004092	CMSS1	98	74.510	Ailuropoda_melanoleuca
ENSMODG00000002275	CMSS1	76	54.455	ENSACIG00000021854	cmss1	99	48.106	Amphilophus_citrinellus
ENSMODG00000002275	CMSS1	83	57.511	ENSAOCG00000013361	cmss1	91	55.472	Amphiprion_ocellaris
ENSMODG00000002275	CMSS1	76	63.366	ENSAPEG00000005829	cmss1	91	54.717	Amphiprion_percula
ENSMODG00000002275	CMSS1	85	62.719	ENSATEG00000008209	cmss1	85	60.408	Anabas_testudineus
ENSMODG00000002275	CMSS1	86	72.174	ENSAPLG00000010542	CMSS1	100	72.174	Anas_platyrhynchos
ENSMODG00000002275	CMSS1	90	73.140	ENSACAG00000011065	CMSS1	88	73.140	Anolis_carolinensis
ENSMODG00000002275	CMSS1	98	72.901	ENSANAG00000023565	CMSS1	98	73.846	Aotus_nancymaae
ENSMODG00000002275	CMSS1	76	61.881	ENSACLG00000027294	cmss1	82	53.968	Astatotilapia_calliptera
ENSMODG00000002275	CMSS1	85	52.609	ENSAMXG00000002046	cmss1	90	48.872	Astyanax_mexicanus
ENSMODG00000002275	CMSS1	92	74.899	ENSBTAG00000013663	CMSS1	94	71.756	Bos_taurus
ENSMODG00000002275	CMSS1	97	74.615	ENSCJAG00000000610	CMSS1	98	74.615	Callithrix_jacchus
ENSMODG00000002275	CMSS1	95	76.772	ENSCAFG00000009230	CMSS1	92	76.772	Canis_familiaris
ENSMODG00000002275	CMSS1	99	75.472	ENSCAFG00020009464	-	95	75.472	Canis_lupus_dingo
ENSMODG00000002275	CMSS1	85	73.894	ENSCAFG00020024156	-	71	73.894	Canis_lupus_dingo
ENSMODG00000002275	CMSS1	98	72.348	ENSCHIG00000013003	CMSS1	94	72.348	Capra_hircus
ENSMODG00000002275	CMSS1	98	72.901	ENSTSYG00000009266	CMSS1	98	73.077	Carlito_syrichta
ENSMODG00000002275	CMSS1	84	59.649	ENSCAPG00000013584	CMSS1	88	64.583	Cavia_aperea
ENSMODG00000002275	CMSS1	97	73.152	ENSCPOG00000014680	CMSS1	92	73.152	Cavia_porcellus
ENSMODG00000002275	CMSS1	97	75.385	ENSCCAG00000034685	CMSS1	98	75.385	Cebus_capucinus
ENSMODG00000002275	CMSS1	97	72.308	ENSCATG00000031980	CMSS1	97	73.622	Cercocebus_atys
ENSMODG00000002275	CMSS1	87	77.826	ENSCLAG00000011241	CMSS1	99	77.826	Chinchilla_lanigera
ENSMODG00000002275	CMSS1	91	75.510	ENSCSAG00000006024	CMSS1	100	75.510	Chlorocebus_sabaeus
ENSMODG00000002275	CMSS1	95	58.268	ENSCHOG00000012098	CMSS1	92	58.268	Choloepus_hoffmanni
ENSMODG00000002275	CMSS1	66	44.886	ENSCING00000014848	-	94	44.886	Ciona_intestinalis
ENSMODG00000002275	CMSS1	97	72.308	ENSCANG00000031337	CMSS1	97	73.622	Colobus_angolensis_palliatus
ENSMODG00000002275	CMSS1	97	71.264	ENSCGRG00001014305	Cmss1	92	71.264	Cricetulus_griseus_chok1gshd
ENSMODG00000002275	CMSS1	97	71.648	ENSCGRG00000006722	Cmss1	100	71.648	Cricetulus_griseus_crigri
ENSMODG00000002275	CMSS1	76	63.861	ENSCSEG00000004958	cmss1	69	63.861	Cynoglossus_semilaevis
ENSMODG00000002275	CMSS1	76	62.376	ENSCVAG00000005039	cmss1	86	55.870	Cyprinodon_variegatus
ENSMODG00000002275	CMSS1	85	51.931	ENSDARG00000112579	cmss1	92	47.232	Danio_rerio
ENSMODG00000002275	CMSS1	100	73.208	ENSDNOG00000040418	CMSS1	93	73.563	Dasypus_novemcinctus
ENSMODG00000002275	CMSS1	97	77.308	ENSDORG00000010461	Cmss1	92	77.308	Dipodomys_ordii
ENSMODG00000002275	CMSS1	50	52.273	ENSEBUG00000002156	-	96	52.273	Eptatretus_burgeri
ENSMODG00000002275	CMSS1	90	75.833	ENSEASG00005010966	CMSS1	99	78.995	Equus_asinus_asinus
ENSMODG00000002275	CMSS1	100	71.698	ENSECAG00000015662	CMSS1	99	77.434	Equus_caballus
ENSMODG00000002275	CMSS1	86	53.947	ENSEEUG00000007624	-	82	55.263	Erinaceus_europaeus
ENSMODG00000002275	CMSS1	76	59.901	ENSELUG00000019459	cmss1	75	58.850	Esox_lucius
ENSMODG00000002275	CMSS1	98	75.954	ENSFCAG00000044577	CMSS1	94	75.954	Felis_catus
ENSMODG00000002275	CMSS1	87	68.696	ENSFALG00000005816	CMSS1	97	68.696	Ficedula_albicollis
ENSMODG00000002275	CMSS1	86	76.754	ENSFDAG00000012577	CMSS1	100	76.754	Fukomys_damarensis
ENSMODG00000002275	CMSS1	86	59.307	ENSFHEG00000012008	cmss1	95	59.307	Fundulus_heteroclitus
ENSMODG00000002275	CMSS1	76	59.901	ENSGMOG00000016729	cmss1	72	59.901	Gadus_morhua
ENSMODG00000002275	CMSS1	89	71.186	ENSGALG00000015267	CMSS1	90	71.186	Gallus_gallus
ENSMODG00000002275	CMSS1	80	62.085	ENSGAFG00000021217	cmss1	77	63.366	Gambusia_affinis
ENSMODG00000002275	CMSS1	76	59.406	ENSGACG00000002798	cmss1	72	59.406	Gasterosteus_aculeatus
ENSMODG00000002275	CMSS1	97	70.342	ENSGAGG00000019861	CMSS1	99	70.342	Gopherus_agassizii
ENSMODG00000002275	CMSS1	95	74.016	ENSGGOG00000014125	CMSS1	97	74.016	Gorilla_gorilla
ENSMODG00000002275	CMSS1	76	61.881	ENSHBUG00000008431	cmss1	84	54.365	Haplochromis_burtoni
ENSMODG00000002275	CMSS1	92	74.486	ENSHGLG00000019481	CMSS1	97	74.486	Heterocephalus_glaber_female
ENSMODG00000002275	CMSS1	97	71.984	ENSHGLG00100010314	CMSS1	99	71.984	Heterocephalus_glaber_male
ENSMODG00000002275	CMSS1	94	58.333	ENSHCOG00000003222	cmss1	85	58.333	Hippocampus_comes
ENSMODG00000002275	CMSS1	83	57.534	ENSIPUG00000011591	cmss1	90	53.053	Ictalurus_punctatus
ENSMODG00000002275	CMSS1	97	74.231	ENSSTOG00000019366	CMSS1	93	74.231	Ictidomys_tridecemlineatus
ENSMODG00000002275	CMSS1	98	72.137	ENSJJAG00000014894	Cmss1	90	79.703	Jaculus_jaculus
ENSMODG00000002275	CMSS1	76	55.446	ENSKMAG00000002390	cmss1	81	55.446	Kryptolebias_marmoratus
ENSMODG00000002275	CMSS1	88	52.869	ENSLBEG00000006298	cmss1	99	52.869	Labrus_bergylta
ENSMODG00000002275	CMSS1	86	67.826	ENSLACG00000009293	CMSS1	100	67.826	Latimeria_chalumnae
ENSMODG00000002275	CMSS1	87	60.345	ENSLOCG00000009391	cmss1	94	56.296	Lepisosteus_oculatus
ENSMODG00000002275	CMSS1	86	79.825	ENSLAFG00000017509	CMSS1	100	79.825	Loxodonta_africana
ENSMODG00000002275	CMSS1	97	72.692	ENSMFAG00000045006	CMSS1	97	74.016	Macaca_fascicularis
ENSMODG00000002275	CMSS1	97	72.308	ENSMMUG00000002939	CMSS1	97	78.539	Macaca_mulatta
ENSMODG00000002275	CMSS1	97	72.692	ENSMNEG00000031315	CMSS1	97	74.016	Macaca_nemestrina
ENSMODG00000002275	CMSS1	97	71.923	ENSMLEG00000033660	CMSS1	97	73.228	Mandrillus_leucophaeus
ENSMODG00000002275	CMSS1	76	63.861	ENSMAMG00000017176	cmss1	92	53.933	Mastacembelus_armatus
ENSMODG00000002275	CMSS1	76	61.881	ENSMZEG00005021886	cmss1	82	53.968	Maylandia_zebra
ENSMODG00000002275	CMSS1	86	71.930	ENSMGAG00000014360	CMSS1	100	71.930	Meleagris_gallopavo
ENSMODG00000002275	CMSS1	98	51.527	ENSMAUG00000020609	Cmss1	91	51.724	Mesocricetus_auratus
ENSMODG00000002275	CMSS1	98	72.519	ENSMICG00000048977	CMSS1	99	72.973	Microcebus_murinus
ENSMODG00000002275	CMSS1	97	72.093	ENSMOCG00000021937	Cmss1	92	72.093	Microtus_ochrogaster
ENSMODG00000002275	CMSS1	76	62.871	ENSMMOG00000019794	cmss1	84	62.871	Mola_mola
ENSMODG00000002275	CMSS1	76	64.356	ENSMALG00000004250	cmss1	86	54.924	Monopterus_albus
ENSMODG00000002275	CMSS1	98	70.769	MGP_CAROLIEiJ_G0020824	Cmss1	94	70.769	Mus_caroli
ENSMODG00000002275	CMSS1	98	71.923	ENSMUSG00000022748	Cmss1	94	71.923	Mus_musculus
ENSMODG00000002275	CMSS1	98	71.154	MGP_PahariEiJ_G0016524	Cmss1	94	71.154	Mus_pahari
ENSMODG00000002275	CMSS1	98	71.538	MGP_SPRETEiJ_G0021724	Cmss1	94	71.538	Mus_spretus
ENSMODG00000002275	CMSS1	91	77.869	ENSMPUG00000011324	CMSS1	97	75.794	Mustela_putorius_furo
ENSMODG00000002275	CMSS1	95	75.000	ENSMLUG00000001131	CMSS1	97	75.000	Myotis_lucifugus
ENSMODG00000002275	CMSS1	97	72.308	ENSNGAG00000020316	Cmss1	92	72.308	Nannospalax_galili
ENSMODG00000002275	CMSS1	76	61.386	ENSNBRG00000003095	cmss1	82	53.571	Neolamprologus_brichardi
ENSMODG00000002275	CMSS1	98	73.282	ENSNLEG00000034172	CMSS1	97	75.197	Nomascus_leucogenys
ENSMODG00000002275	CMSS1	86	78.070	ENSMEUG00000014505	CMSS1	100	78.070	Notamacropus_eugenii
ENSMODG00000002275	CMSS1	98	73.745	ENSOPRG00000002986	CMSS1	93	73.745	Ochotona_princeps
ENSMODG00000002275	CMSS1	98	71.374	ENSODEG00000005226	-	94	71.374	Octodon_degus
ENSMODG00000002275	CMSS1	89	73.617	ENSODEG00000003558	-	87	73.617	Octodon_degus
ENSMODG00000002275	CMSS1	89	63.136	ENSODEG00000009446	-	91	63.136	Octodon_degus
ENSMODG00000002275	CMSS1	99	59.176	ENSODEG00000001853	-	96	59.176	Octodon_degus
ENSMODG00000002275	CMSS1	83	60.000	ENSONIG00000006678	cmss1	92	53.968	Oreochromis_niloticus
ENSMODG00000002275	CMSS1	97	76.265	ENSOANG00000007529	CMSS1	100	78.112	Ornithorhynchus_anatinus
ENSMODG00000002275	CMSS1	95	75.197	ENSOCUG00000025366	CMSS1	92	75.197	Oryctolagus_cuniculus
ENSMODG00000002275	CMSS1	88	60.256	ENSORLG00000020340	cmss1	87	56.226	Oryzias_latipes
ENSMODG00000002275	CMSS1	86	54.585	ENSORLG00020012235	cmss1	97	55.022	Oryzias_latipes_hni
ENSMODG00000002275	CMSS1	76	57.426	ENSORLG00015015551	cmss1	75	57.426	Oryzias_latipes_hsok
ENSMODG00000002275	CMSS1	86	61.842	ENSOMEG00000012555	cmss1	81	60.256	Oryzias_melastigma
ENSMODG00000002275	CMSS1	86	77.632	ENSOGAG00000002045	CMSS1	100	77.632	Otolemur_garnettii
ENSMODG00000002275	CMSS1	95	73.725	ENSOARG00000017899	CMSS1	88	73.725	Ovis_aries
ENSMODG00000002275	CMSS1	97	73.563	ENSPPAG00000038515	CMSS1	96	73.563	Pan_paniscus
ENSMODG00000002275	CMSS1	98	75.954	ENSPPRG00000016767	CMSS1	94	75.954	Panthera_pardus
ENSMODG00000002275	CMSS1	98	75.573	ENSPTIG00000018274	CMSS1	94	75.573	Panthera_tigris_altaica
ENSMODG00000002275	CMSS1	98	72.137	ENSPTRG00000015157	CMSS1	100	75.510	Pan_troglodytes
ENSMODG00000002275	CMSS1	96	73.541	ENSPANG00000019980	CMSS1	98	74.104	Papio_anubis
ENSMODG00000002275	CMSS1	85	63.913	ENSPKIG00000012609	cmss1	98	58.672	Paramormyrops_kingsleyae
ENSMODG00000002275	CMSS1	86	76.419	ENSPSIG00000003849	CMSS1	100	76.419	Pelodiscus_sinensis
ENSMODG00000002275	CMSS1	76	63.054	ENSPMGG00000010286	cmss1	87	63.054	Periophthalmus_magnuspinnatus
ENSMODG00000002275	CMSS1	97	71.264	ENSPEMG00000016384	Cmss1	92	71.264	Peromyscus_maniculatus_bairdii
ENSMODG00000002275	CMSS1	77	53.922	ENSPMAG00000001146	cmss1	99	54.455	Petromyzon_marinus
ENSMODG00000002275	CMSS1	98	86.312	ENSPCIG00000015656	CMSS1	98	86.923	Phascolarctos_cinereus
ENSMODG00000002275	CMSS1	76	63.861	ENSPFOG00000016849	cmss1	95	54.044	Poecilia_formosa
ENSMODG00000002275	CMSS1	76	63.366	ENSPLAG00000008323	cmss1	95	53.676	Poecilia_latipinna
ENSMODG00000002275	CMSS1	76	63.861	ENSPMEG00000021020	cmss1	94	54.044	Poecilia_mexicana
ENSMODG00000002275	CMSS1	76	63.366	ENSPREG00000007618	cmss1	93	53.480	Poecilia_reticulata
ENSMODG00000002275	CMSS1	97	74.615	ENSPPYG00000013606	CMSS1	94	74.615	Pongo_abelii
ENSMODG00000002275	CMSS1	98	73.106	ENSPCOG00000020035	CMSS1	99	73.745	Propithecus_coquereli
ENSMODG00000002275	CMSS1	98	65.267	ENSPVAG00000017031	CMSS1	94	65.267	Pteropus_vampyrus
ENSMODG00000002275	CMSS1	73	62.371	ENSPNYG00000013428	cmss1	79	55.752	Pundamilia_nyererei
ENSMODG00000002275	CMSS1	89	53.333	ENSPNAG00000007912	cmss1	87	51.550	Pygocentrus_nattereri
ENSMODG00000002275	CMSS1	95	72.222	ENSRNOG00000027888	Cmss1	98	72.222	Rattus_norvegicus
ENSMODG00000002275	CMSS1	97	71.923	ENSRBIG00000037931	CMSS1	97	73.228	Rhinopithecus_bieti
ENSMODG00000002275	CMSS1	97	71.923	ENSRROG00000042910	CMSS1	97	73.228	Rhinopithecus_roxellana
ENSMODG00000002275	CMSS1	97	74.615	ENSSBOG00000030980	CMSS1	98	74.615	Saimiri_boliviensis_boliviensis
ENSMODG00000002275	CMSS1	92	86.454	ENSSHAG00000009321	CMSS1	99	86.454	Sarcophilus_harrisii
ENSMODG00000002275	CMSS1	85	60.870	ENSSFOG00015001509	cmss1	93	55.720	Scleropages_formosus
ENSMODG00000002275	CMSS1	95	56.078	ENSSMAG00000001653	cmss1	92	54.104	Scophthalmus_maximus
ENSMODG00000002275	CMSS1	85	59.825	ENSSDUG00000007719	cmss1	85	58.943	Seriola_dumerili
ENSMODG00000002275	CMSS1	78	64.734	ENSSLDG00000012300	cmss1	81	58.883	Seriola_lalandi_dorsalis
ENSMODG00000002275	CMSS1	98	64.122	ENSSARG00000003584	CMSS1	94	64.122	Sorex_araneus
ENSMODG00000002275	CMSS1	85	73.894	ENSSPUG00000003865	CMSS1	100	73.894	Sphenodon_punctatus
ENSMODG00000002275	CMSS1	78	64.734	ENSSPAG00000019182	cmss1	63	65.347	Stegastes_partitus
ENSMODG00000002275	CMSS1	98	73.664	ENSSSCG00000011970	CMSS1	94	73.664	Sus_scrofa
ENSMODG00000002275	CMSS1	86	68.996	ENSTGUG00000013635	CMSS1	100	68.996	Taeniopygia_guttata
ENSMODG00000002275	CMSS1	76	62.871	ENSTRUG00000015265	cmss1	72	62.871	Takifugu_rubripes
ENSMODG00000002275	CMSS1	76	57.921	ENSTNIG00000002880	cmss1	73	57.921	Tetraodon_nigroviridis
ENSMODG00000002275	CMSS1	86	56.140	ENSTBEG00000016722	CMSS1	81	56.140	Tupaia_belangeri
ENSMODG00000002275	CMSS1	98	70.611	ENSTTRG00000001562	CMSS1	94	70.611	Tursiops_truncatus
ENSMODG00000002275	CMSS1	97	74.713	ENSUAMG00000024209	CMSS1	100	80.269	Ursus_americanus
ENSMODG00000002275	CMSS1	95	75.984	ENSUMAG00000001983	CMSS1	98	75.984	Ursus_maritimus
ENSMODG00000002275	CMSS1	86	64.912	ENSVPAG00000000263	CMSS1	82	64.912	Vicugna_pacos
ENSMODG00000002275	CMSS1	85	77.876	ENSVVUG00000007776	-	89	77.876	Vulpes_vulpes
ENSMODG00000002275	CMSS1	92	78.455	ENSVVUG00000021647	-	100	78.455	Vulpes_vulpes
ENSMODG00000002275	CMSS1	88	63.362	ENSXETG00000011858	cmss1	81	63.362	Xenopus_tropicalis
ENSMODG00000002275	CMSS1	78	63.942	ENSXCOG00000018724	cmss1	69	64.356	Xiphophorus_couchianus
ENSMODG00000002275	CMSS1	78	63.942	ENSXMAG00000011243	cmss1	76	64.356	Xiphophorus_maculatus