EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000002470 (Gene tree)
Gene ID: 100020734
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 7997 bases
Position: chr2:536432084-536440080
Accession: 100020734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000003000	RRM_1	PF00076.22	1.8e-62	1	4
ENSMODP00000003000	RRM_1	PF00076.22	1.8e-62	2	4
ENSMODP00000003000	RRM_1	PF00076.22	1.8e-62	3	4
ENSMODP00000003000	RRM_1	PF00076.22	1.8e-62	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000003063	-	2109	-	ENSMODP00000003000	702 (aa)	XP_007486139	F7BWB5

Gene Model

Click here to download ENSMODG00000002470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000002470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000002470	-	56	59.406	ENSAPOG00000023888	ncl	55	59.406	Acanthochromis_polyacanthus
ENSMODG00000002470	-	61	40.590	ENSAPOG00000014534	-	66	41.451	Acanthochromis_polyacanthus
ENSMODG00000002470	-	72	36.416	ENSAOCG00000014792	-	60	40.921	Amphiprion_ocellaris
ENSMODG00000002470	-	72	36.609	ENSAPEG00000013612	-	60	41.176	Amphiprion_percula
ENSMODG00000002470	-	60	42.627	ENSATEG00000019862	-	79	42.308	Anabas_testudineus
ENSMODG00000002470	-	54	57.922	ENSATEG00000013343	ncl	65	52.878	Anabas_testudineus
ENSMODG00000002470	-	54	66.412	ENSAPLG00000012897	-	63	66.582	Anas_platyrhynchos
ENSMODG00000002470	-	85	58.703	ENSACAG00000001006	-	52	66.067	Anolis_carolinensis
ENSMODG00000002470	-	54	55.699	ENSAMXG00000001647	ncl	81	58.306	Astyanax_mexicanus
ENSMODG00000002470	-	52	62.069	ENSCHIG00000003401	-	85	61.538	Capra_hircus
ENSMODG00000002470	-	55	51.515	ENSCHIG00000012665	-	53	53.786	Capra_hircus
ENSMODG00000002470	-	91	58.595	ENSCPBG00000016444	-	90	58.234	Chrysemys_picta_bellii
ENSMODG00000002470	-	67	58.182	ENSCSEG00000015089	ncl	56	58.586	Cynoglossus_semilaevis
ENSMODG00000002470	-	54	56.443	ENSCVAG00000012600	ncl	55	56.566	Cyprinodon_variegatus
ENSMODG00000002470	-	54	60.062	ENSDARG00000002710	ncl	88	60.125	Danio_rerio
ENSMODG00000002470	-	57	55.583	ENSDNOG00000040257	-	60	59.178	Dasypus_novemcinctus
ENSMODG00000002470	-	64	44.934	ENSELUG00000022826	-	81	46.736	Esox_lucius
ENSMODG00000002470	-	54	62.183	ENSFALG00000007592	-	55	62.245	Ficedula_albicollis
ENSMODG00000002470	-	58	49.522	ENSFHEG00000018000	ncl	60	55.211	Fundulus_heteroclitus
ENSMODG00000002470	-	55	54.082	ENSGMOG00000001341	ncl	59	54.211	Gadus_morhua
ENSMODG00000002470	-	54	65.990	ENSGALG00000032930	NCL	55	66.071	Gallus_gallus
ENSMODG00000002470	-	54	55.844	ENSGAFG00000015375	ncl	50	55.875	Gambusia_affinis
ENSMODG00000002470	-	54	55.641	ENSGACG00000008970	ncl	60	55.497	Gasterosteus_aculeatus
ENSMODG00000002470	-	91	58.780	ENSGAGG00000013330	-	56	67.692	Gopherus_agassizii
ENSMODG00000002470	-	54	58.290	ENSHCOG00000010234	ncl	88	49.175	Hippocampus_comes
ENSMODG00000002470	-	50	57.402	ENSIPUG00000024556	ncl	84	58.133	Ictalurus_punctatus
ENSMODG00000002470	-	54	58.182	ENSKMAG00000008111	ncl	53	58.225	Kryptolebias_marmoratus
ENSMODG00000002470	-	53	56.397	ENSLBEG00000019073	ncl	55	56.430	Labrus_bergylta
ENSMODG00000002470	-	56	40.686	ENSLBEG00000007915	-	65	40.921	Labrus_bergylta
ENSMODG00000002470	-	52	40.526	ENSLBEG00000014278	-	81	40.984	Labrus_bergylta
ENSMODG00000002470	-	54	62.916	ENSLACG00000009328	ncl	56	62.982	Latimeria_chalumnae
ENSMODG00000002470	-	70	48.768	ENSLACG00000022167	-	79	49.871	Latimeria_chalumnae
ENSMODG00000002470	-	52	56.989	ENSLOCG00000004828	ncl	50	56.736	Lepisosteus_oculatus
ENSMODG00000002470	-	63	36.876	ENSMAMG00000003479	-	69	38.303	Mastacembelus_armatus
ENSMODG00000002470	-	53	65.354	ENSMGAG00000008147	-	85	65.526	Meleagris_gallopavo
ENSMODG00000002470	-	51	58.282	ENSMMOG00000008553	ncl	82	59.236	Mola_mola
ENSMODG00000002470	-	55	58.840	ENSMALG00000014827	ncl	52	32.867	Monopterus_albus
ENSMODG00000002470	-	79	49.117	ENSMPUG00000001663	-	66	54.403	Mustela_putorius_furo
ENSMODG00000002470	-	90	78.505	ENSMEUG00000012335	-	90	78.505	Notamacropus_eugenii
ENSMODG00000002470	-	54	56.443	ENSONIG00000012508	ncl	52	57.520	Oreochromis_niloticus
ENSMODG00000002470	-	54	37.824	ENSONIG00000010631	-	95	37.760	Oreochromis_niloticus
ENSMODG00000002470	-	50	58.543	ENSORLG00000007055	ncl	62	53.333	Oryzias_latipes
ENSMODG00000002470	-	57	33.254	ENSORLG00000004645	-	84	34.422	Oryzias_latipes
ENSMODG00000002470	-	54	56.701	ENSORLG00020017943	ncl	51	57.106	Oryzias_latipes_hni
ENSMODG00000002470	-	56	33.413	ENSORLG00020003497	-	74	34.606	Oryzias_latipes_hni
ENSMODG00000002470	-	54	55.497	ENSORLG00015013815	ncl	89	58.991	Oryzias_latipes_hsok
ENSMODG00000002470	-	57	33.967	ENSORLG00015006613	-	78	34.925	Oryzias_latipes_hsok
ENSMODG00000002470	-	56	34.719	ENSOMEG00000015864	-	82	34.518	Oryzias_melastigma
ENSMODG00000002470	-	54	57.922	ENSOMEG00000020786	ncl	50	57.623	Oryzias_melastigma
ENSMODG00000002470	-	67	56.667	ENSPKIG00000002604	ncl	52	57.031	Paramormyrops_kingsleyae
ENSMODG00000002470	-	55	68.112	ENSPSIG00000002361	-	54	68.299	Pelodiscus_sinensis
ENSMODG00000002470	-	56	57.500	ENSPMGG00000004709	ncl	78	58.147	Periophthalmus_magnuspinnatus
ENSMODG00000002470	-	59	46.622	ENSPMAG00000003855	ncl	53	45.172	Petromyzon_marinus
ENSMODG00000002470	-	91	85.385	ENSPCIG00000003293	-	91	85.714	Phascolarctos_cinereus
ENSMODG00000002470	-	54	55.128	ENSPFOG00000024205	ncl	51	56.298	Poecilia_formosa
ENSMODG00000002470	-	54	54.359	ENSPLAG00000024026	ncl	51	55.527	Poecilia_latipinna
ENSMODG00000002470	-	54	55.128	ENSPMEG00000006000	ncl	63	56.298	Poecilia_mexicana
ENSMODG00000002470	-	54	56.443	ENSPNYG00000020494	ncl	52	57.520	Pundamilia_nyererei
ENSMODG00000002470	-	54	57.662	ENSPNAG00000006192	ncl	90	46.175	Pygocentrus_nattereri
ENSMODG00000002470	-	54	85.079	ENSSHAG00000002702	-	96	74.068	Sarcophilus_harrisii
ENSMODG00000002470	-	94	80.712	ENSSHAG00000007489	-	100	84.130	Sarcophilus_harrisii
ENSMODG00000002470	-	59	56.840	ENSSFOG00015008583	ncl	57	60.156	Scleropages_formosus
ENSMODG00000002470	-	73	36.604	ENSSMAG00000007582	-	63	40.909	Scophthalmus_maximus
ENSMODG00000002470	-	55	57.398	ENSSDUG00000006128	ncl	84	57.702	Seriola_dumerili
ENSMODG00000002470	-	70	36.614	ENSSDUG00000010922	-	82	40.561	Seriola_dumerili
ENSMODG00000002470	-	61	39.953	ENSSLDG00000015784	-	82	39.896	Seriola_lalandi_dorsalis
ENSMODG00000002470	-	54	57.403	ENSSLDG00000002012	ncl	52	57.702	Seriola_lalandi_dorsalis
ENSMODG00000002470	-	69	71.552	ENSSARG00000010007	-	63	70.968	Sorex_araneus
ENSMODG00000002470	-	64	62.208	ENSSPUG00000008244	-	89	55.976	Sphenodon_punctatus
ENSMODG00000002470	-	51	58.784	ENSSPAG00000002637	ncl	83	58.966	Stegastes_partitus
ENSMODG00000002470	-	58	41.190	ENSSPAG00000001859	-	61	41.282	Stegastes_partitus
ENSMODG00000002470	-	67	51.775	ENSTRUG00000008185	ncl	54	55.091	Takifugu_rubripes
ENSMODG00000002470	-	54	61.917	ENSXETG00000009517	ncl	53	62.402	Xenopus_tropicalis
ENSMODG00000002470	-	56	41.846	ENSXCOG00000003524	ncl	87	46.203	Xiphophorus_couchianus
ENSMODG00000002470	-	53	35.677	ENSXCOG00000007369	-	89	35.602	Xiphophorus_couchianus
ENSMODG00000002470	-	54	56.923	ENSXMAG00000005914	ncl	51	56.812	Xiphophorus_maculatus