EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000002884 (Gene tree)
Gene ID: 100018587
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 32036 bases
Position: chr6:29095835-29127870
Accession: 100018587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000003504	RNA_pol_I_A49	PF06870.12	4.1e-108	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000003581	POLR1E-201	2555	-	ENSMODP00000003504	408 (aa)	XP_007498064	F7B649

Gene Model

Click here to download ENSMODG00000002884's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000002884's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000002884	POLR1E	97	73.485	ENSG00000137054	POLR1E	95	73.485	Homo_sapiens
ENSMODG00000002884	POLR1E	98	44.279	ENSAPOG00000012452	polr1e	96	44.279	Acanthochromis_polyacanthus
ENSMODG00000002884	POLR1E	99	66.667	ENSAMEG00000010193	POLR1E	94	66.667	Ailuropoda_melanoleuca
ENSMODG00000002884	POLR1E	92	45.383	ENSACIG00000009884	polr1e	95	45.383	Amphilophus_citrinellus
ENSMODG00000002884	POLR1E	98	46.667	ENSAOCG00000005665	polr1e	96	46.667	Amphiprion_ocellaris
ENSMODG00000002884	POLR1E	98	46.420	ENSAPEG00000020581	polr1e	96	46.420	Amphiprion_percula
ENSMODG00000002884	POLR1E	98	47.015	ENSATEG00000020609	polr1e	96	47.015	Anabas_testudineus
ENSMODG00000002884	POLR1E	79	56.131	ENSAPLG00000010340	POLR1E	96	56.131	Anas_platyrhynchos
ENSMODG00000002884	POLR1E	97	74.242	ENSANAG00000038046	POLR1E	95	74.242	Aotus_nancymaae
ENSMODG00000002884	POLR1E	92	46.825	ENSACLG00000013685	polr1e	90	46.825	Astatotilapia_calliptera
ENSMODG00000002884	POLR1E	98	44.913	ENSAMXG00000018181	polr1e	96	44.913	Astyanax_mexicanus
ENSMODG00000002884	POLR1E	97	76.010	ENSBTAG00000012243	POLR1E	95	76.010	Bos_taurus
ENSMODG00000002884	POLR1E	90	73.497	ENSCJAG00000010512	POLR1E	91	73.497	Callithrix_jacchus
ENSMODG00000002884	POLR1E	97	74.495	ENSCAFG00000002377	POLR1E	95	74.495	Canis_familiaris
ENSMODG00000002884	POLR1E	97	74.747	ENSCAFG00020017851	POLR1E	95	74.747	Canis_lupus_dingo
ENSMODG00000002884	POLR1E	97	75.253	ENSCHIG00000019479	POLR1E	95	75.253	Capra_hircus
ENSMODG00000002884	POLR1E	97	74.242	ENSTSYG00000002075	POLR1E	95	74.242	Carlito_syrichta
ENSMODG00000002884	POLR1E	67	75.092	ENSCAPG00000015653	POLR1E	94	75.092	Cavia_aperea
ENSMODG00000002884	POLR1E	97	74.242	ENSCPOG00000009965	POLR1E	95	74.242	Cavia_porcellus
ENSMODG00000002884	POLR1E	97	67.424	ENSCCAG00000029460	POLR1E	94	67.424	Cebus_capucinus
ENSMODG00000002884	POLR1E	97	73.485	ENSCATG00000031732	POLR1E	93	75.926	Cercocebus_atys
ENSMODG00000002884	POLR1E	88	75.140	ENSCLAG00000012701	POLR1E	94	75.140	Chinchilla_lanigera
ENSMODG00000002884	POLR1E	97	73.485	ENSCSAG00000010782	POLR1E	95	73.485	Chlorocebus_sabaeus
ENSMODG00000002884	POLR1E	93	66.491	ENSCHOG00000013024	POLR1E	79	66.491	Choloepus_hoffmanni
ENSMODG00000002884	POLR1E	100	67.476	ENSCPBG00000006923	POLR1E	99	68.689	Chrysemys_picta_bellii
ENSMODG00000002884	POLR1E	97	73.485	ENSCANG00000036112	POLR1E	95	73.485	Colobus_angolensis_palliatus
ENSMODG00000002884	POLR1E	97	70.455	ENSCGRG00001006197	Polr1e	91	70.455	Cricetulus_griseus_chok1gshd
ENSMODG00000002884	POLR1E	97	69.949	ENSCGRG00000006430	Polr1e	91	69.949	Cricetulus_griseus_crigri
ENSMODG00000002884	POLR1E	98	43.035	ENSCSEG00000005121	polr1e	96	43.035	Cynoglossus_semilaevis
ENSMODG00000002884	POLR1E	98	43.812	ENSCVAG00000019759	polr1e	96	43.564	Cyprinodon_variegatus
ENSMODG00000002884	POLR1E	98	43.921	ENSDARG00000006434	polr1e	98	43.447	Danio_rerio
ENSMODG00000002884	POLR1E	97	66.966	ENSDNOG00000010257	POLR1E	95	66.966	Dasypus_novemcinctus
ENSMODG00000002884	POLR1E	84	69.971	ENSETEG00000018204	POLR1E	96	69.971	Echinops_telfairi
ENSMODG00000002884	POLR1E	61	38.346	ENSEBUG00000010635	-	94	38.519	Eptatretus_burgeri
ENSMODG00000002884	POLR1E	97	75.000	ENSEASG00005000675	POLR1E	95	75.000	Equus_asinus_asinus
ENSMODG00000002884	POLR1E	97	75.000	ENSECAG00000014669	POLR1E	95	75.000	Equus_caballus
ENSMODG00000002884	POLR1E	93	62.269	ENSEEUG00000011928	POLR1E	81	62.269	Erinaceus_europaeus
ENSMODG00000002884	POLR1E	98	46.269	ENSELUG00000008150	polr1e	95	46.269	Esox_lucius
ENSMODG00000002884	POLR1E	97	73.485	ENSFCAG00000013081	POLR1E	95	73.485	Felis_catus
ENSMODG00000002884	POLR1E	95	63.265	ENSFALG00000012950	POLR1E	98	63.265	Ficedula_albicollis
ENSMODG00000002884	POLR1E	97	74.242	ENSFDAG00000016917	POLR1E	95	74.242	Fukomys_damarensis
ENSMODG00000002884	POLR1E	98	44.279	ENSFHEG00000009801	polr1e	96	44.279	Fundulus_heteroclitus
ENSMODG00000002884	POLR1E	98	37.284	ENSGMOG00000003336	POLR1E	95	37.284	Gadus_morhua
ENSMODG00000002884	POLR1E	98	63.568	ENSGALG00000005395	POLR1E	96	63.568	Gallus_gallus
ENSMODG00000002884	POLR1E	98	44.030	ENSGAFG00000004850	polr1e	96	44.030	Gambusia_affinis
ENSMODG00000002884	POLR1E	98	42.469	ENSGACG00000016087	polr1e	96	42.469	Gasterosteus_aculeatus
ENSMODG00000002884	POLR1E	97	62.374	ENSGAGG00000001659	POLR1E	95	62.189	Gopherus_agassizii
ENSMODG00000002884	POLR1E	97	73.485	ENSGGOG00000001882	POLR1E	93	75.926	Gorilla_gorilla
ENSMODG00000002884	POLR1E	92	47.354	ENSHBUG00000002559	polr1e	90	47.354	Haplochromis_burtoni
ENSMODG00000002884	POLR1E	97	73.485	ENSHGLG00000002036	POLR1E	95	73.485	Heterocephalus_glaber_female
ENSMODG00000002884	POLR1E	97	73.737	ENSHGLG00100012784	POLR1E	95	73.737	Heterocephalus_glaber_male
ENSMODG00000002884	POLR1E	98	44.030	ENSHCOG00000002774	polr1e	96	44.554	Hippocampus_comes
ENSMODG00000002884	POLR1E	98	44.089	ENSIPUG00000003019	polr1e	96	44.089	Ictalurus_punctatus
ENSMODG00000002884	POLR1E	98	73.116	ENSSTOG00000009810	POLR1E	95	73.116	Ictidomys_tridecemlineatus
ENSMODG00000002884	POLR1E	97	71.717	ENSJJAG00000020731	Polr1e	91	71.717	Jaculus_jaculus
ENSMODG00000002884	POLR1E	98	43.176	ENSKMAG00000000046	polr1e	96	43.176	Kryptolebias_marmoratus
ENSMODG00000002884	POLR1E	98	45.865	ENSLBEG00000003104	polr1e	95	46.366	Labrus_bergylta
ENSMODG00000002884	POLR1E	84	63.977	ENSLACG00000003416	POLR1E	96	63.977	Latimeria_chalumnae
ENSMODG00000002884	POLR1E	98	52.868	ENSLOCG00000012859	polr1e	95	52.868	Lepisosteus_oculatus
ENSMODG00000002884	POLR1E	97	74.747	ENSLAFG00000012831	POLR1E	94	74.747	Loxodonta_africana
ENSMODG00000002884	POLR1E	97	73.737	ENSMFAG00000045465	POLR1E	93	75.926	Macaca_fascicularis
ENSMODG00000002884	POLR1E	97	73.737	ENSMMUG00000017892	POLR1E	93	75.926	Macaca_mulatta
ENSMODG00000002884	POLR1E	97	67.901	ENSMNEG00000040283	POLR1E	93	74.408	Macaca_nemestrina
ENSMODG00000002884	POLR1E	97	73.737	ENSMLEG00000031135	POLR1E	93	75.926	Mandrillus_leucophaeus
ENSMODG00000002884	POLR1E	98	43.781	ENSMAMG00000001260	polr1e	95	43.781	Mastacembelus_armatus
ENSMODG00000002884	POLR1E	92	46.825	ENSMZEG00005021536	polr1e	90	46.825	Maylandia_zebra
ENSMODG00000002884	POLR1E	97	69.697	ENSMAUG00000021044	Polr1e	91	69.697	Mesocricetus_auratus
ENSMODG00000002884	POLR1E	97	76.322	ENSMICG00000003673	POLR1E	95	76.322	Microcebus_murinus
ENSMODG00000002884	POLR1E	97	70.202	ENSMOCG00000012920	Polr1e	91	70.202	Microtus_ochrogaster
ENSMODG00000002884	POLR1E	92	44.882	ENSMMOG00000007391	polr1e	93	44.882	Mola_mola
ENSMODG00000002884	POLR1E	98	45.274	ENSMALG00000002665	polr1e	95	45.274	Monopterus_albus
ENSMODG00000002884	POLR1E	97	67.677	MGP_CAROLIEiJ_G0025967	Polr1e	93	68.074	Mus_caroli
ENSMODG00000002884	POLR1E	97	68.434	ENSMUSG00000028318	Polr1e	93	68.865	Mus_musculus
ENSMODG00000002884	POLR1E	97	69.697	MGP_PahariEiJ_G0024114	Polr1e	93	70.185	Mus_pahari
ENSMODG00000002884	POLR1E	97	68.182	MGP_SPRETEiJ_G0026930	Polr1e	93	68.602	Mus_spretus
ENSMODG00000002884	POLR1E	97	67.265	ENSMPUG00000006040	POLR1E	95	67.040	Mustela_putorius_furo
ENSMODG00000002884	POLR1E	97	74.242	ENSMLUG00000012688	POLR1E	91	74.242	Myotis_lucifugus
ENSMODG00000002884	POLR1E	97	72.727	ENSNGAG00000002520	Polr1e	91	72.727	Nannospalax_galili
ENSMODG00000002884	POLR1E	92	47.354	ENSNBRG00000016822	polr1e	90	47.354	Neolamprologus_brichardi
ENSMODG00000002884	POLR1E	97	73.737	ENSNLEG00000003616	POLR1E	93	75.926	Nomascus_leucogenys
ENSMODG00000002884	POLR1E	75	91.250	ENSMEUG00000015372	-	80	91.250	Notamacropus_eugenii
ENSMODG00000002884	POLR1E	85	63.768	ENSOPRG00000014206	POLR1E	96	63.768	Ochotona_princeps
ENSMODG00000002884	POLR1E	97	73.737	ENSODEG00000014565	POLR1E	92	73.737	Octodon_degus
ENSMODG00000002884	POLR1E	92	47.895	ENSONIG00000008921	polr1e	90	47.619	Oreochromis_niloticus
ENSMODG00000002884	POLR1E	97	71.212	ENSOCUG00000024773	POLR1E	95	71.212	Oryctolagus_cuniculus
ENSMODG00000002884	POLR1E	95	45.960	ENSORLG00000005143	polr1e	94	45.960	Oryzias_latipes
ENSMODG00000002884	POLR1E	90	45.238	ENSORLG00020007271	polr1e	95	45.238	Oryzias_latipes_hni
ENSMODG00000002884	POLR1E	95	45.707	ENSORLG00015000137	polr1e	94	45.707	Oryzias_latipes_hsok
ENSMODG00000002884	POLR1E	95	44.020	ENSOMEG00000013264	polr1e	92	44.020	Oryzias_melastigma
ENSMODG00000002884	POLR1E	97	75.505	ENSOGAG00000012981	POLR1E	92	75.505	Otolemur_garnettii
ENSMODG00000002884	POLR1E	97	75.253	ENSOARG00000011465	POLR1E	91	75.253	Ovis_aries
ENSMODG00000002884	POLR1E	97	73.737	ENSPPAG00000034566	POLR1E	93	75.926	Pan_paniscus
ENSMODG00000002884	POLR1E	97	73.485	ENSPPRG00000005649	POLR1E	95	73.485	Panthera_pardus
ENSMODG00000002884	POLR1E	97	73.485	ENSPTIG00000009774	POLR1E	95	73.485	Panthera_tigris_altaica
ENSMODG00000002884	POLR1E	97	73.737	ENSPTRG00000020944	POLR1E	93	75.926	Pan_troglodytes
ENSMODG00000002884	POLR1E	97	73.737	ENSPANG00000025563	POLR1E	93	75.926	Papio_anubis
ENSMODG00000002884	POLR1E	98	44.335	ENSPKIG00000003562	polr1e	96	44.335	Paramormyrops_kingsleyae
ENSMODG00000002884	POLR1E	96	63.613	ENSPSIG00000003274	POLR1E	92	63.613	Pelodiscus_sinensis
ENSMODG00000002884	POLR1E	93	45.455	ENSPMGG00000024169	polr1e	92	45.455	Periophthalmus_magnuspinnatus
ENSMODG00000002884	POLR1E	99	68.238	ENSPEMG00000019151	-	93	68.238	Peromyscus_maniculatus_bairdii
ENSMODG00000002884	POLR1E	99	55.941	ENSPEMG00000022300	-	92	55.941	Peromyscus_maniculatus_bairdii
ENSMODG00000002884	POLR1E	99	93.120	ENSPCIG00000014798	POLR1E	99	93.120	Phascolarctos_cinereus
ENSMODG00000002884	POLR1E	98	43.192	ENSPFOG00000019627	polr1e	96	43.192	Poecilia_formosa
ENSMODG00000002884	POLR1E	98	45.522	ENSPLAG00000022679	polr1e	96	45.522	Poecilia_latipinna
ENSMODG00000002884	POLR1E	84	44.638	ENSPMEG00000022123	polr1e	89	44.638	Poecilia_mexicana
ENSMODG00000002884	POLR1E	98	44.527	ENSPREG00000009470	polr1e	96	44.527	Poecilia_reticulata
ENSMODG00000002884	POLR1E	97	73.737	ENSPPYG00000019061	POLR1E	94	73.737	Pongo_abelii
ENSMODG00000002884	POLR1E	54	73.756	ENSPCAG00000004891	POLR1E	73	73.756	Procavia_capensis
ENSMODG00000002884	POLR1E	97	75.253	ENSPCOG00000027448	POLR1E	95	75.253	Propithecus_coquereli
ENSMODG00000002884	POLR1E	93	76.517	ENSPVAG00000007940	POLR1E	80	76.517	Pteropus_vampyrus
ENSMODG00000002884	POLR1E	92	47.090	ENSPNYG00000001032	polr1e	90	47.090	Pundamilia_nyererei
ENSMODG00000002884	POLR1E	95	43.250	ENSPNAG00000006987	polr1e	94	43.250	Pygocentrus_nattereri
ENSMODG00000002884	POLR1E	97	69.192	ENSRNOG00000012664	Polr1e	91	69.192	Rattus_norvegicus
ENSMODG00000002884	POLR1E	96	73.333	ENSRBIG00000034214	POLR1E	96	74.590	Rhinopithecus_bieti
ENSMODG00000002884	POLR1E	97	73.737	ENSRROG00000031986	POLR1E	93	75.926	Rhinopithecus_roxellana
ENSMODG00000002884	POLR1E	97	74.055	ENSSBOG00000021415	POLR1E	95	74.055	Saimiri_boliviensis_boliviensis
ENSMODG00000002884	POLR1E	86	90.057	ENSSHAG00000016084	POLR1E	98	90.057	Sarcophilus_harrisii
ENSMODG00000002884	POLR1E	100	48.193	ENSSFOG00015002293	polr1e	99	48.193	Scleropages_formosus
ENSMODG00000002884	POLR1E	98	47.666	ENSSMAG00000011672	polr1e	89	47.666	Scophthalmus_maximus
ENSMODG00000002884	POLR1E	98	46.269	ENSSDUG00000022279	polr1e	95	46.269	Seriola_dumerili
ENSMODG00000002884	POLR1E	98	46.020	ENSSLDG00000024918	polr1e	95	46.020	Seriola_lalandi_dorsalis
ENSMODG00000002884	POLR1E	65	65.714	ENSSARG00000009810	-	58	63.793	Sorex_araneus
ENSMODG00000002884	POLR1E	100	65.942	ENSSPUG00000009499	POLR1E	99	65.942	Sphenodon_punctatus
ENSMODG00000002884	POLR1E	98	47.160	ENSSPAG00000021240	polr1e	96	47.160	Stegastes_partitus
ENSMODG00000002884	POLR1E	97	75.000	ENSSSCG00000005347	POLR1E	95	75.000	Sus_scrofa
ENSMODG00000002884	POLR1E	93	54.439	ENSTGUG00000007169	POLR1E	97	54.439	Taeniopygia_guttata
ENSMODG00000002884	POLR1E	98	44.089	ENSTRUG00000020779	polr1e	96	45.380	Takifugu_rubripes
ENSMODG00000002884	POLR1E	98	44.169	ENSTNIG00000017812	polr1e	96	44.169	Tetraodon_nigroviridis
ENSMODG00000002884	POLR1E	93	77.045	ENSTBEG00000013786	POLR1E	81	77.045	Tupaia_belangeri
ENSMODG00000002884	POLR1E	93	75.654	ENSTTRG00000008294	POLR1E	81	75.654	Tursiops_truncatus
ENSMODG00000002884	POLR1E	99	74.752	ENSUAMG00000012474	POLR1E	98	75.766	Ursus_americanus
ENSMODG00000002884	POLR1E	99	74.752	ENSUMAG00000011496	POLR1E	96	74.752	Ursus_maritimus
ENSMODG00000002884	POLR1E	84	70.674	ENSVPAG00000009048	POLR1E	81	70.674	Vicugna_pacos
ENSMODG00000002884	POLR1E	97	74.495	ENSVVUG00000019954	POLR1E	95	74.495	Vulpes_vulpes
ENSMODG00000002884	POLR1E	98	54.975	ENSXETG00000006533	polr1e	96	54.975	Xenopus_tropicalis
ENSMODG00000002884	POLR1E	98	44.030	ENSXCOG00000013706	polr1e	96	44.030	Xiphophorus_couchianus
ENSMODG00000002884	POLR1E	98	45.025	ENSXMAG00000012484	polr1e	96	45.025	Xiphophorus_maculatus