EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000002946 (Gene tree)
Gene ID: 100032985
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 22799 bases
Position: chr2:471138215-471161013
Accession: 100032985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000003584	RRM_1	PF00076.22	4.7e-18	1	2
ENSMODP00000003584	RRM_1	PF00076.22	4.7e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000003662	RNPC3-201	1950	-	ENSMODP00000003584	510 (aa)	XP_001381889	F6PKA9

Gene Model

Click here to download ENSMODG00000002946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000002946's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000002946	RNPC3	99	78.682	ENSG00000185946	RNPC3	100	81.622	Homo_sapiens
ENSMODG00000002946	RNPC3	95	56.795	ENSAPOG00000017371	rnpc3	97	56.795	Acanthochromis_polyacanthus
ENSMODG00000002946	RNPC3	98	78.543	ENSAMEG00000001694	RNPC3	99	77.842	Ailuropoda_melanoleuca
ENSMODG00000002946	RNPC3	95	53.280	ENSACIG00000021043	rnpc3	97	53.280	Amphilophus_citrinellus
ENSMODG00000002946	RNPC3	95	56.338	ENSAOCG00000014052	rnpc3	95	56.338	Amphiprion_ocellaris
ENSMODG00000002946	RNPC3	95	56.137	ENSAPEG00000008739	rnpc3	95	56.137	Amphiprion_percula
ENSMODG00000002946	RNPC3	95	55.666	ENSATEG00000021263	rnpc3	97	55.666	Anabas_testudineus
ENSMODG00000002946	RNPC3	88	71.556	ENSAPLG00000015605	RNPC3	100	72.222	Anas_platyrhynchos
ENSMODG00000002946	RNPC3	94	70.270	ENSACAG00000002029	RNPC3	96	70.287	Anolis_carolinensis
ENSMODG00000002946	RNPC3	99	77.713	ENSANAG00000019950	RNPC3	99	77.713	Aotus_nancymaae
ENSMODG00000002946	RNPC3	95	55.828	ENSACLG00000014702	rnpc3	97	55.828	Astatotilapia_calliptera
ENSMODG00000002946	RNPC3	95	53.768	ENSAMXG00000033372	rnpc3	97	55.804	Astyanax_mexicanus
ENSMODG00000002946	RNPC3	99	78.488	ENSBTAG00000019091	RNPC3	99	78.488	Bos_taurus
ENSMODG00000002946	RNPC3	99	75.969	ENSCJAG00000035686	RNPC3	99	76.550	Callithrix_jacchus
ENSMODG00000002946	RNPC3	99	78.337	ENSCAFG00000019972	RNPC3	99	78.337	Canis_familiaris
ENSMODG00000002946	RNPC3	99	78.530	ENSCAFG00020011300	RNPC3	99	78.530	Canis_lupus_dingo
ENSMODG00000002946	RNPC3	99	77.907	ENSCHIG00000020361	RNPC3	99	77.907	Capra_hircus
ENSMODG00000002946	RNPC3	99	76.550	ENSTSYG00000030256	RNPC3	99	76.550	Carlito_syrichta
ENSMODG00000002946	RNPC3	84	68.349	ENSCAPG00000013600	RNPC3	97	68.531	Cavia_aperea
ENSMODG00000002946	RNPC3	99	76.357	ENSCPOG00000031638	RNPC3	98	76.817	Cavia_porcellus
ENSMODG00000002946	RNPC3	99	77.907	ENSCCAG00000024301	RNPC3	99	77.907	Cebus_capucinus
ENSMODG00000002946	RNPC3	98	62.076	ENSCATG00000035930	-	98	61.078	Cercocebus_atys
ENSMODG00000002946	RNPC3	99	78.835	ENSCATG00000002086	RNPC3	99	78.835	Cercocebus_atys
ENSMODG00000002946	RNPC3	99	75.388	ENSCLAG00000005169	RNPC3	99	73.837	Chinchilla_lanigera
ENSMODG00000002946	RNPC3	99	78.835	ENSCSAG00000001519	RNPC3	99	78.835	Chlorocebus_sabaeus
ENSMODG00000002946	RNPC3	96	73.834	ENSCPBG00000028311	RNPC3	96	74.239	Chrysemys_picta_bellii
ENSMODG00000002946	RNPC3	94	37.773	ENSCING00000021276	-	99	38.277	Ciona_intestinalis
ENSMODG00000002946	RNPC3	99	78.447	ENSCANG00000031444	RNPC3	99	78.447	Colobus_angolensis_palliatus
ENSMODG00000002946	RNPC3	99	77.713	ENSCGRG00001019276	Rnpc3	100	77.713	Cricetulus_griseus_chok1gshd
ENSMODG00000002946	RNPC3	87	78.540	ENSCGRG00000000053	Rnpc3	100	78.540	Cricetulus_griseus_crigri
ENSMODG00000002946	RNPC3	95	54.490	ENSCSEG00000013475	rnpc3	96	54.733	Cynoglossus_semilaevis
ENSMODG00000002946	RNPC3	95	53.892	ENSCVAG00000002645	rnpc3	97	53.892	Cyprinodon_variegatus
ENSMODG00000002946	RNPC3	95	56.262	ENSDARG00000011247	rnpc3	94	63.793	Danio_rerio
ENSMODG00000002946	RNPC3	99	77.519	ENSDNOG00000044555	-	99	77.519	Dasypus_novemcinctus
ENSMODG00000002946	RNPC3	99	76.938	ENSDNOG00000047498	-	99	76.938	Dasypus_novemcinctus
ENSMODG00000002946	RNPC3	100	76.402	ENSDORG00000027343	Rnpc3	100	76.402	Dipodomys_ordii
ENSMODG00000002946	RNPC3	95	47.913	ENSEBUG00000002068	rnpc3	97	48.310	Eptatretus_burgeri
ENSMODG00000002946	RNPC3	99	78.295	ENSEASG00005015957	RNPC3	99	78.295	Equus_asinus_asinus
ENSMODG00000002946	RNPC3	99	78.488	ENSECAG00000021148	RNPC3	99	78.488	Equus_caballus
ENSMODG00000002946	RNPC3	95	53.725	ENSELUG00000002264	rnpc3	97	52.353	Esox_lucius
ENSMODG00000002946	RNPC3	99	78.337	ENSFCAG00000024312	RNPC3	99	78.337	Felis_catus
ENSMODG00000002946	RNPC3	88	74.444	ENSFALG00000002580	RNPC3	100	74.000	Ficedula_albicollis
ENSMODG00000002946	RNPC3	99	77.413	ENSFDAG00000019948	RNPC3	100	77.132	Fukomys_damarensis
ENSMODG00000002946	RNPC3	96	52.342	ENSFHEG00000020647	rnpc3	98	53.024	Fundulus_heteroclitus
ENSMODG00000002946	RNPC3	96	53.984	ENSGMOG00000019213	rnpc3	96	52.525	Gadus_morhua
ENSMODG00000002946	RNPC3	96	74.745	ENSGALG00000005162	RNPC3	89	73.727	Gallus_gallus
ENSMODG00000002946	RNPC3	95	53.000	ENSGAFG00000017236	rnpc3	97	53.800	Gambusia_affinis
ENSMODG00000002946	RNPC3	95	55.668	ENSGACG00000002048	rnpc3	97	54.403	Gasterosteus_aculeatus
ENSMODG00000002946	RNPC3	96	73.631	ENSGAGG00000008438	RNPC3	95	73.834	Gopherus_agassizii
ENSMODG00000002946	RNPC3	99	66.139	ENSGGOG00000026201	-	99	66.139	Gorilla_gorilla
ENSMODG00000002946	RNPC3	79	67.500	ENSHBUG00000015966	rnpc3	83	67.500	Haplochromis_burtoni
ENSMODG00000002946	RNPC3	99	76.744	ENSHGLG00000001708	RNPC3	99	76.744	Heterocephalus_glaber_female
ENSMODG00000002946	RNPC3	99	76.744	ENSHGLG00100003005	RNPC3	99	76.744	Heterocephalus_glaber_male
ENSMODG00000002946	RNPC3	96	54.108	ENSHCOG00000017135	rnpc3	98	54.108	Hippocampus_comes
ENSMODG00000002946	RNPC3	94	56.612	ENSIPUG00000002916	rnpc3	96	56.612	Ictalurus_punctatus
ENSMODG00000002946	RNPC3	99	77.713	ENSSTOG00000025020	RNPC3	99	77.713	Ictidomys_tridecemlineatus
ENSMODG00000002946	RNPC3	99	76.117	ENSJJAG00000010203	Rnpc3	100	76.117	Jaculus_jaculus
ENSMODG00000002946	RNPC3	95	54.910	ENSKMAG00000017358	rnpc3	98	54.637	Kryptolebias_marmoratus
ENSMODG00000002946	RNPC3	95	55.622	ENSLBEG00000024901	rnpc3	95	55.242	Labrus_bergylta
ENSMODG00000002946	RNPC3	95	63.618	ENSLACG00000005720	RNPC3	90	61.992	Latimeria_chalumnae
ENSMODG00000002946	RNPC3	96	58.586	ENSLOCG00000007986	rnpc3	97	58.788	Lepisosteus_oculatus
ENSMODG00000002946	RNPC3	99	77.907	ENSLAFG00000032342	RNPC3	100	77.907	Loxodonta_africana
ENSMODG00000002946	RNPC3	98	59.400	ENSMFAG00000002917	-	98	58.800	Macaca_fascicularis
ENSMODG00000002946	RNPC3	99	78.641	ENSMFAG00000002004	RNPC3	99	78.641	Macaca_fascicularis
ENSMODG00000002946	RNPC3	99	78.447	ENSMMUG00000018039	RNPC3	99	78.447	Macaca_mulatta
ENSMODG00000002946	RNPC3	81	74.879	ENSMMUG00000002098	-	89	74.879	Macaca_mulatta
ENSMODG00000002946	RNPC3	99	74.175	ENSMNEG00000033950	RNPC3	99	74.175	Macaca_nemestrina
ENSMODG00000002946	RNPC3	76	63.846	ENSMNEG00000029209	-	98	57.600	Macaca_nemestrina
ENSMODG00000002946	RNPC3	98	60.594	ENSMLEG00000034644	-	98	60.236	Mandrillus_leucophaeus
ENSMODG00000002946	RNPC3	99	78.835	ENSMLEG00000033628	RNPC3	99	78.835	Mandrillus_leucophaeus
ENSMODG00000002946	RNPC3	95	52.323	ENSMAMG00000007496	rnpc3	96	52.323	Mastacembelus_armatus
ENSMODG00000002946	RNPC3	95	54.941	ENSMZEG00005020233	rnpc3	97	54.941	Maylandia_zebra
ENSMODG00000002946	RNPC3	88	72.807	ENSMGAG00000006381	RNPC3	100	72.588	Meleagris_gallopavo
ENSMODG00000002946	RNPC3	96	78.947	ENSMAUG00000001358	Rnpc3	100	77.519	Mesocricetus_auratus
ENSMODG00000002946	RNPC3	99	78.682	ENSMICG00000029591	RNPC3	99	78.682	Microcebus_murinus
ENSMODG00000002946	RNPC3	96	78.947	ENSMOCG00000013423	Rnpc3	100	77.027	Microtus_ochrogaster
ENSMODG00000002946	RNPC3	95	51.540	ENSMMOG00000005309	rnpc3	96	52.156	Mola_mola
ENSMODG00000002946	RNPC3	95	52.305	ENSMALG00000015471	rnpc3	97	52.390	Monopterus_albus
ENSMODG00000002946	RNPC3	99	76.969	MGP_CAROLIEiJ_G0025555	Rnpc3	100	76.969	Mus_caroli
ENSMODG00000002946	RNPC3	99	77.670	ENSMUSG00000027981	Rnpc3	99	78.834	Mus_musculus
ENSMODG00000002946	RNPC3	99	77.559	MGP_PahariEiJ_G0027001	Rnpc3	100	77.559	Mus_pahari
ENSMODG00000002946	RNPC3	99	77.362	MGP_SPRETEiJ_G0026505	Rnpc3	100	77.362	Mus_spretus
ENSMODG00000002946	RNPC3	99	77.950	ENSMPUG00000007349	RNPC3	99	77.950	Mustela_putorius_furo
ENSMODG00000002946	RNPC3	99	76.357	ENSMLUG00000028743	RNPC3	99	76.357	Myotis_lucifugus
ENSMODG00000002946	RNPC3	99	76.117	ENSNGAG00000010939	Rnpc3	100	76.117	Nannospalax_galili
ENSMODG00000002946	RNPC3	95	55.828	ENSNBRG00000012196	rnpc3	94	55.828	Neolamprologus_brichardi
ENSMODG00000002946	RNPC3	99	78.295	ENSNLEG00000012013	RNPC3	99	78.295	Nomascus_leucogenys
ENSMODG00000002946	RNPC3	99	75.194	ENSODEG00000007612	RNPC3	99	75.194	Octodon_degus
ENSMODG00000002946	RNPC3	95	56.098	ENSONIG00000004770	rnpc3	99	56.098	Oreochromis_niloticus
ENSMODG00000002946	RNPC3	90	77.730	ENSOANG00000008220	RNPC3	100	76.874	Ornithorhynchus_anatinus
ENSMODG00000002946	RNPC3	99	76.938	ENSOCUG00000004016	RNPC3	99	77.326	Oryctolagus_cuniculus
ENSMODG00000002946	RNPC3	95	54.303	ENSORLG00000005694	rnpc3	97	54.303	Oryzias_latipes
ENSMODG00000002946	RNPC3	95	54.918	ENSORLG00020005513	rnpc3	97	54.918	Oryzias_latipes_hni
ENSMODG00000002946	RNPC3	95	54.303	ENSORLG00015002179	rnpc3	97	54.303	Oryzias_latipes_hsok
ENSMODG00000002946	RNPC3	95	53.988	ENSOMEG00000017737	rnpc3	97	53.988	Oryzias_melastigma
ENSMODG00000002946	RNPC3	99	78.252	ENSOGAG00000026182	RNPC3	99	78.252	Otolemur_garnettii
ENSMODG00000002946	RNPC3	99	78.101	ENSOARG00000018719	RNPC3	99	78.101	Ovis_aries
ENSMODG00000002946	RNPC3	99	78.337	ENSPPAG00000037459	RNPC3	99	78.337	Pan_paniscus
ENSMODG00000002946	RNPC3	99	67.129	ENSPPAG00000030278	-	98	67.066	Pan_paniscus
ENSMODG00000002946	RNPC3	99	78.530	ENSPPRG00000020246	RNPC3	99	78.530	Panthera_pardus
ENSMODG00000002946	RNPC3	98	78.698	ENSPTIG00000009887	RNPC3	99	78.698	Panthera_tigris_altaica
ENSMODG00000002946	RNPC3	99	78.488	ENSPTRG00000033902	RNPC3	99	78.488	Pan_troglodytes
ENSMODG00000002946	RNPC3	98	66.068	ENSPTRG00000044227	-	98	66.068	Pan_troglodytes
ENSMODG00000002946	RNPC3	99	78.835	ENSPANG00000012137	RNPC3	99	78.835	Papio_anubis
ENSMODG00000002946	RNPC3	98	63.745	ENSPANG00000029957	-	99	62.749	Papio_anubis
ENSMODG00000002946	RNPC3	95	54.032	ENSPKIG00000008828	rnpc3	96	53.024	Paramormyrops_kingsleyae
ENSMODG00000002946	RNPC3	63	74.390	ENSPSIG00000007396	RNPC3	100	74.390	Pelodiscus_sinensis
ENSMODG00000002946	RNPC3	96	51.089	ENSPMGG00000011742	rnpc3	98	51.683	Periophthalmus_magnuspinnatus
ENSMODG00000002946	RNPC3	88	77.243	ENSPEMG00000020112	Rnpc3	100	77.876	Peromyscus_maniculatus_bairdii
ENSMODG00000002946	RNPC3	50	47.744	ENSPMAG00000003778	rnpc3	97	45.753	Petromyzon_marinus
ENSMODG00000002946	RNPC3	100	96.863	ENSPCIG00000004415	-	100	96.863	Phascolarctos_cinereus
ENSMODG00000002946	RNPC3	95	53.629	ENSPFOG00000009895	rnpc3	97	53.414	Poecilia_formosa
ENSMODG00000002946	RNPC3	95	53.320	ENSPLAG00000012023	rnpc3	97	53.320	Poecilia_latipinna
ENSMODG00000002946	RNPC3	95	53.831	ENSPMEG00000003663	rnpc3	97	53.614	Poecilia_mexicana
ENSMODG00000002946	RNPC3	95	53.320	ENSPREG00000010206	rnpc3	97	53.307	Poecilia_reticulata
ENSMODG00000002946	RNPC3	84	74.596	ENSPPYG00000001102	RNPC3	99	74.596	Pongo_abelii
ENSMODG00000002946	RNPC3	95	55.624	ENSPNYG00000020603	rnpc3	97	55.624	Pundamilia_nyererei
ENSMODG00000002946	RNPC3	95	51.093	ENSPNAG00000000524	rnpc3	77	60.092	Pygocentrus_nattereri
ENSMODG00000002946	RNPC3	99	75.969	ENSRNOG00000017310	Rnpc3	100	75.969	Rattus_norvegicus
ENSMODG00000002946	RNPC3	99	73.643	ENSRBIG00000043897	RNPC3	99	73.643	Rhinopithecus_bieti
ENSMODG00000002946	RNPC3	99	78.641	ENSRROG00000032334	RNPC3	99	78.641	Rhinopithecus_roxellana
ENSMODG00000002946	RNPC3	99	77.907	ENSSBOG00000024473	RNPC3	99	77.907	Saimiri_boliviensis_boliviensis
ENSMODG00000002946	RNPC3	100	96.117	ENSSHAG00000011859	RNPC3	100	96.117	Sarcophilus_harrisii
ENSMODG00000002946	RNPC3	95	58.621	ENSSFOG00015013055	rnpc3	99	58.418	Scleropages_formosus
ENSMODG00000002946	RNPC3	95	53.892	ENSSMAG00000020346	rnpc3	97	51.896	Scophthalmus_maximus
ENSMODG00000002946	RNPC3	95	54.076	ENSSDUG00000006600	rnpc3	97	54.672	Seriola_dumerili
ENSMODG00000002946	RNPC3	95	54.871	ENSSLDG00000007979	rnpc3	97	54.871	Seriola_lalandi_dorsalis
ENSMODG00000002946	RNPC3	95	69.057	ENSSPUG00000003872	-	92	70.492	Sphenodon_punctatus
ENSMODG00000002946	RNPC3	94	75.000	ENSSPUG00000008539	-	92	76.458	Sphenodon_punctatus
ENSMODG00000002946	RNPC3	95	55.804	ENSSPAG00000005633	rnpc3	97	56.008	Stegastes_partitus
ENSMODG00000002946	RNPC3	99	77.713	ENSSSCG00000037254	RNPC3	99	76.938	Sus_scrofa
ENSMODG00000002946	RNPC3	88	75.278	ENSTGUG00000004795	-	100	73.719	Taeniopygia_guttata
ENSMODG00000002946	RNPC3	95	55.375	ENSTNIG00000018963	rnpc3	97	55.375	Tetraodon_nigroviridis
ENSMODG00000002946	RNPC3	98	78.895	ENSUMAG00000007775	RNPC3	99	78.895	Ursus_maritimus
ENSMODG00000002946	RNPC3	99	78.530	ENSVVUG00000000331	RNPC3	99	78.530	Vulpes_vulpes
ENSMODG00000002946	RNPC3	95	51.400	ENSXETG00000025027	rnpc3	97	51.992	Xenopus_tropicalis
ENSMODG00000002946	RNPC3	95	50.690	ENSXCOG00000005013	rnpc3	97	52.663	Xiphophorus_couchianus
ENSMODG00000002946	RNPC3	95	53.213	ENSXMAG00000006495	rnpc3	97	53.414	Xiphophorus_maculatus