EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000003030 (Gene tree)
Gene ID: 100025556
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 3474 bases
Position: chr2:231926789-231930262
Accession: 19071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000003678	RRM_1	PF00076.22	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000003761	ALYREF-201	924	-	ENSMODP00000003678	307 (aa)	-	F6Q1W2

Gene Model

Click here to download ENSMODG00000003030's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03013	RNA transport	KEGG
mdo03015	mRNA surveillance pathway	KEGG
mdo03040	Spliceosome	KEGG
mdo05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000003030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000003030	ALYREF	84	93.774	ENSG00000183684	ALYREF	97	93.774	Homo_sapiens
ENSMODG00000003030	ALYREF	84	67.509	ENSAPOG00000018455	ALYREF	99	71.119	Acanthochromis_polyacanthus
ENSMODG00000003030	ALYREF	67	86.124	ENSAMEG00000017463	ALYREF	74	90.710	Ailuropoda_melanoleuca
ENSMODG00000003030	ALYREF	84	77.395	ENSACAG00000010526	ALYREF	99	76.245	Anolis_carolinensis
ENSMODG00000003030	ALYREF	58	95.480	ENSANAG00000022638	-	75	95.480	Aotus_nancymaae
ENSMODG00000003030	ALYREF	84	78.210	ENSANAG00000028229	-	78	80.156	Aotus_nancymaae
ENSMODG00000003030	ALYREF	84	96.109	ENSBTAG00000008498	ALYREF	99	96.109	Bos_taurus
ENSMODG00000003030	ALYREF	84	92.607	ENSCJAG00000039942	ALYREF	97	92.996	Callithrix_jacchus
ENSMODG00000003030	ALYREF	84	96.498	ENSCAFG00000005877	ALYREF	99	96.498	Canis_familiaris
ENSMODG00000003030	ALYREF	84	96.498	ENSCAFG00020009815	ALYREF	99	96.498	Canis_lupus_dingo
ENSMODG00000003030	ALYREF	84	96.109	ENSCHIG00000017396	ALYREF	96	96.109	Capra_hircus
ENSMODG00000003030	ALYREF	81	77.734	ENSTSYG00000002272	ALYREF	78	89.604	Carlito_syrichta
ENSMODG00000003030	ALYREF	84	92.996	ENSCPOG00000013710	ALYREF	99	90.661	Cavia_porcellus
ENSMODG00000003030	ALYREF	84	72.374	ENSCCAG00000030237	-	99	71.206	Cebus_capucinus
ENSMODG00000003030	ALYREF	84	92.996	ENSCCAG00000020578	-	97	93.385	Cebus_capucinus
ENSMODG00000003030	ALYREF	84	96.109	ENSCATG00000033169	ALYREF	97	96.109	Cercocebus_atys
ENSMODG00000003030	ALYREF	84	85.603	ENSCLAG00000015026	ALYREF	99	85.603	Chinchilla_lanigera
ENSMODG00000003030	ALYREF	84	96.109	ENSCSAG00000002216	ALYREF	97	96.109	Chlorocebus_sabaeus
ENSMODG00000003030	ALYREF	67	85.714	ENSCANG00000034056	ALYREF	96	84.211	Colobus_angolensis_palliatus
ENSMODG00000003030	ALYREF	84	91.829	ENSCGRG00001018191	-	99	88.716	Cricetulus_griseus_chok1gshd
ENSMODG00000003030	ALYREF	63	89.119	ENSCGRG00000015871	-	89	83.784	Cricetulus_griseus_crigri
ENSMODG00000003030	ALYREF	61	53.846	ENSCSEG00000015438	-	98	53.922	Cynoglossus_semilaevis
ENSMODG00000003030	ALYREF	58	94.350	ENSDNOG00000002563	ALYREF	78	91.351	Dasypus_novemcinctus
ENSMODG00000003030	ALYREF	74	79.487	ENSDORG00000025849	-	73	94.972	Dipodomys_ordii
ENSMODG00000003030	ALYREF	58	93.220	ENSETEG00000016596	ALYREF	99	91.525	Echinops_telfairi
ENSMODG00000003030	ALYREF	84	95.720	ENSEASG00005005824	ALYREF	95	95.720	Equus_asinus_asinus
ENSMODG00000003030	ALYREF	84	95.720	ENSECAG00000018754	ALYREF	95	95.720	Equus_caballus
ENSMODG00000003030	ALYREF	56	88.439	ENSEEUG00000010164	ALYREF	100	93.064	Erinaceus_europaeus
ENSMODG00000003030	ALYREF	84	96.109	ENSFCAG00000022549	ALYREF	97	96.109	Felis_catus
ENSMODG00000003030	ALYREF	70	86.047	ENSFDAG00000001213	ALYREF	93	87.440	Fukomys_damarensis
ENSMODG00000003030	ALYREF	84	84.496	ENSGALG00000007237	ALYREF	99	84.496	Gallus_gallus
ENSMODG00000003030	ALYREF	84	69.697	ENSGACG00000013328	ALYREF	99	69.318	Gasterosteus_aculeatus
ENSMODG00000003030	ALYREF	84	83.908	ENSGAGG00000008536	ALYREF	99	83.525	Gopherus_agassizii
ENSMODG00000003030	ALYREF	84	95.720	ENSGGOG00000013935	ALYREF	98	96.457	Gorilla_gorilla
ENSMODG00000003030	ALYREF	84	92.218	ENSHGLG00000008293	ALYREF	99	91.440	Heterocephalus_glaber_female
ENSMODG00000003030	ALYREF	67	79.911	ENSHGLG00100006949	ALYREF	95	80.631	Heterocephalus_glaber_male
ENSMODG00000003030	ALYREF	84	67.790	ENSHCOG00000015046	ALYREF	99	68.266	Hippocampus_comes
ENSMODG00000003030	ALYREF	84	91.440	ENSJJAG00000004134	-	99	89.883	Jaculus_jaculus
ENSMODG00000003030	ALYREF	84	71.103	ENSLACG00000005694	ALYREF	99	73.004	Latimeria_chalumnae
ENSMODG00000003030	ALYREF	61	94.118	ENSLAFG00000003083	ALYREF	98	91.351	Loxodonta_africana
ENSMODG00000003030	ALYREF	84	89.883	ENSMFAG00000001394	ALYREF	97	91.829	Macaca_fascicularis
ENSMODG00000003030	ALYREF	84	96.109	ENSMMUG00000012884	ALYREF	97	96.109	Macaca_mulatta
ENSMODG00000003030	ALYREF	84	96.109	ENSMNEG00000043666	ALYREF	97	96.109	Macaca_nemestrina
ENSMODG00000003030	ALYREF	60	87.831	ENSMLEG00000043353	ALYREF	87	85.185	Mandrillus_leucophaeus
ENSMODG00000003030	ALYREF	84	78.599	ENSMAUG00000020552	-	99	74.903	Mesocricetus_auratus
ENSMODG00000003030	ALYREF	84	95.331	ENSMICG00000017403	ALYREF	97	95.331	Microcebus_murinus
ENSMODG00000003030	ALYREF	84	83.398	ENSMOCG00000016792	-	99	81.081	Microtus_ochrogaster
ENSMODG00000003030	ALYREF	84	69.091	ENSMALG00000019408	ALYREF	99	69.708	Monopterus_albus
ENSMODG00000003030	ALYREF	84	92.607	MGP_CAROLIEiJ_G0017529	Alyref	99	89.883	Mus_caroli
ENSMODG00000003030	ALYREF	84	72.763	MGP_CAROLIEiJ_G0014874	Alyref2	99	70.428	Mus_caroli
ENSMODG00000003030	ALYREF	84	60.702	ENSMUSG00000097550	Gm21304	99	53.521	Mus_musculus
ENSMODG00000003030	ALYREF	84	59.398	ENSMUSG00000117091	AC153137.1	97	57.752	Mus_musculus
ENSMODG00000003030	ALYREF	77	65.532	ENSMUSG00000096744	Gm4307	62	64.851	Mus_musculus
ENSMODG00000003030	ALYREF	77	65.532	ENSMUSG00000112931	Gm4303	62	64.851	Mus_musculus
ENSMODG00000003030	ALYREF	84	60.702	ENSMUSG00000097878	Gm8764	98	61.078	Mus_musculus
ENSMODG00000003030	ALYREF	84	92.607	ENSMUSG00000025134	Alyref	99	89.883	Mus_musculus
ENSMODG00000003030	ALYREF	84	60.702	ENSMUSG00000091779	Gm21293	99	53.521	Mus_musculus
ENSMODG00000003030	ALYREF	84	60.702	ENSMUSG00000095022	Gm20765	99	53.521	Mus_musculus
ENSMODG00000003030	ALYREF	77	64.407	ENSMUSG00000096640	Gm4312	62	63.861	Mus_musculus
ENSMODG00000003030	ALYREF	84	60.150	ENSMUSG00000086727	4931428L18Rik	97	58.527	Mus_musculus
ENSMODG00000003030	ALYREF	77	65.532	ENSMUSG00000112856	Gm4305	62	64.851	Mus_musculus
ENSMODG00000003030	ALYREF	84	75.194	ENSMUSG00000060244	Alyref2	99	68.872	Mus_musculus
ENSMODG00000003030	ALYREF	77	65.678	ENSMUSG00000091101	Gm4302	61	64.851	Mus_musculus
ENSMODG00000003030	ALYREF	84	60.702	ENSMUSG00000094144	Gm21312	99	53.521	Mus_musculus
ENSMODG00000003030	ALYREF	84	59.862	ENSMUSG00000090854	Gm4340	99	51.389	Mus_musculus
ENSMODG00000003030	ALYREF	77	64.407	ENSMUSG00000094314	Gm4301	62	63.861	Mus_musculus
ENSMODG00000003030	ALYREF	84	60.702	ENSMUSG00000097427	Gm6763	98	61.078	Mus_musculus
ENSMODG00000003030	ALYREF	84	92.607	MGP_PahariEiJ_G0018655	-	99	89.883	Mus_pahari
ENSMODG00000003030	ALYREF	62	93.684	MGP_PahariEiJ_G0018656	-	99	93.158	Mus_pahari
ENSMODG00000003030	ALYREF	69	67.453	MGP_PahariEiJ_G0027255	-	79	65.347	Mus_pahari
ENSMODG00000003030	ALYREF	69	67.453	MGP_PahariEiJ_G0027254	-	81	65.347	Mus_pahari
ENSMODG00000003030	ALYREF	84	74.806	MGP_SPRETEiJ_G0015679	Alyref2	99	68.482	Mus_spretus
ENSMODG00000003030	ALYREF	58	56.637	MGP_SPRETEiJ_G0016590	-	54	77.049	Mus_spretus
ENSMODG00000003030	ALYREF	84	92.607	MGP_SPRETEiJ_G0018373	Alyref	99	89.883	Mus_spretus
ENSMODG00000003030	ALYREF	84	51.504	ENSMLUG00000023213	-	67	60.221	Myotis_lucifugus
ENSMODG00000003030	ALYREF	82	57.143	ENSMLUG00000015043	-	98	56.757	Myotis_lucifugus
ENSMODG00000003030	ALYREF	84	62.791	ENSMLUG00000027352	-	79	61.628	Myotis_lucifugus
ENSMODG00000003030	ALYREF	82	57.088	ENSMLUG00000024471	-	82	56.322	Myotis_lucifugus
ENSMODG00000003030	ALYREF	84	67.442	ENSMLUG00000027516	-	80	67.829	Myotis_lucifugus
ENSMODG00000003030	ALYREF	82	62.992	ENSMLUG00000024976	-	79	60.630	Myotis_lucifugus
ENSMODG00000003030	ALYREF	82	59.144	ENSMLUG00000022869	-	71	65.700	Myotis_lucifugus
ENSMODG00000003030	ALYREF	64	62.626	ENSMLUG00000028343	-	85	65.730	Myotis_lucifugus
ENSMODG00000003030	ALYREF	82	64.453	ENSMLUG00000025677	-	77	63.281	Myotis_lucifugus
ENSMODG00000003030	ALYREF	82	61.660	ENSMLUG00000024447	-	76	61.660	Myotis_lucifugus
ENSMODG00000003030	ALYREF	64	87.374	ENSMLUG00000009555	-	66	92.090	Myotis_lucifugus
ENSMODG00000003030	ALYREF	82	68.217	ENSMLUG00000002626	-	98	65.116	Myotis_lucifugus
ENSMODG00000003030	ALYREF	82	61.719	ENSMLUG00000030407	-	77	61.719	Myotis_lucifugus
ENSMODG00000003030	ALYREF	82	63.889	ENSMLUG00000026271	-	79	63.095	Myotis_lucifugus
ENSMODG00000003030	ALYREF	93	88.772	ENSNLEG00000010313	ALYREF	97	95.720	Nomascus_leucogenys
ENSMODG00000003030	ALYREF	74	78.509	ENSMEUG00000002210	ALYREF	99	78.509	Notamacropus_eugenii
ENSMODG00000003030	ALYREF	84	92.692	ENSODEG00000008359	ALYREF	99	92.692	Octodon_degus
ENSMODG00000003030	ALYREF	84	67.883	ENSORLG00000012331	ALYREF	99	68.864	Oryzias_latipes
ENSMODG00000003030	ALYREF	64	88.832	ENSOGAG00000012409	ALYREF	76	92.737	Otolemur_garnettii
ENSMODG00000003030	ALYREF	58	97.175	ENSOARG00000017932	ALYREF	66	97.175	Ovis_aries
ENSMODG00000003030	ALYREF	84	96.109	ENSPPRG00000010829	ALYREF	97	96.109	Panthera_pardus
ENSMODG00000003030	ALYREF	93	88.772	ENSPTRG00000009774	ALYREF	97	95.720	Pan_troglodytes
ENSMODG00000003030	ALYREF	84	96.109	ENSPANG00000019265	ALYREF	97	96.109	Papio_anubis
ENSMODG00000003030	ALYREF	84	93.385	ENSPPYG00000008749	ALYREF	97	93.774	Pongo_abelii
ENSMODG00000003030	ALYREF	84	95.331	ENSPCOG00000020874	ALYREF	97	95.331	Propithecus_coquereli
ENSMODG00000003030	ALYREF	84	78.599	ENSPVAG00000017866	ALYREF	99	78.599	Pteropus_vampyrus
ENSMODG00000003030	ALYREF	57	94.253	ENSRNOG00000036687	Alyref	91	93.642	Rattus_norvegicus
ENSMODG00000003030	ALYREF	65	87.562	ENSRBIG00000039651	ALYREF	73	95.531	Rhinopithecus_bieti
ENSMODG00000003030	ALYREF	82	84.127	ENSRROG00000045364	ALYREF	81	96.618	Rhinopithecus_roxellana
ENSMODG00000003030	ALYREF	62	94.271	ENSSHAG00000010459	ALYREF	95	95.652	Sarcophilus_harrisii
ENSMODG00000003030	ALYREF	84	50.719	ENSSDUG00000003992	-	98	52.708	Seriola_dumerili
ENSMODG00000003030	ALYREF	83	51.661	ENSSLDG00000005386	-	98	53.285	Seriola_lalandi_dorsalis
ENSMODG00000003030	ALYREF	84	82.375	ENSSPUG00000004600	ALYREF	99	81.226	Sphenodon_punctatus
ENSMODG00000003030	ALYREF	87	67.596	ENSSPAG00000011178	ALYREF	98	70.357	Stegastes_partitus
ENSMODG00000003030	ALYREF	84	96.109	ENSSSCG00000032655	ALYREF	99	96.109	Sus_scrofa
ENSMODG00000003030	ALYREF	84	68.266	ENSTRUG00000008828	ALYREF	99	67.647	Takifugu_rubripes
ENSMODG00000003030	ALYREF	58	96.610	ENSTBEG00000005834	ALYREF	99	96.610	Tupaia_belangeri
ENSMODG00000003030	ALYREF	84	92.996	ENSTTRG00000012275	ALYREF	99	92.996	Tursiops_truncatus
ENSMODG00000003030	ALYREF	65	75.000	ENSUAMG00000016931	ALYREF	71	78.238	Ursus_americanus
ENSMODG00000003030	ALYREF	71	70.996	ENSUMAG00000016384	ALYREF	71	78.238	Ursus_maritimus
ENSMODG00000003030	ALYREF	84	77.736	ENSXETG00000005391	alyref	99	75.758	Xenopus_tropicalis