EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000003202 (Gene tree)
Gene ID: 100019930
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 54885 bases
Position: chr6:31819209-31874093
Accession: 100019930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000003897	MIF4G_like	PF09088.11	8.4e-37	1	1
ENSMODP00000003897	MIF4G_like_2	PF09090.11	1.2e-86	1	1
ENSMODP00000003897	MIF4G	PF02854.19	8.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000003983	NCBP1-201	6475	-	ENSMODP00000003897	794 (aa)	XP_007498091	F6VFW6

Gene Model

Click here to download ENSMODG00000003202's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03013	RNA transport	KEGG
mdo03015	mRNA surveillance pathway	KEGG
mdo03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000003202's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000003202	NCBP1	99	93.544	ENSG00000136937	NCBP1	100	93.797	Homo_sapiens
ENSMODG00000003202	NCBP1	99	82.997	ENSAPOG00000008002	NCBP1	99	82.872	Acanthochromis_polyacanthus
ENSMODG00000003202	NCBP1	99	93.434	ENSAMEG00000004763	NCBP1	100	93.687	Ailuropoda_melanoleuca
ENSMODG00000003202	NCBP1	99	82.850	ENSACIG00000000274	NCBP1	99	82.850	Amphilophus_citrinellus
ENSMODG00000003202	NCBP1	99	83.123	ENSAOCG00000021148	NCBP1	99	82.746	Amphiprion_ocellaris
ENSMODG00000003202	NCBP1	99	83.123	ENSAPEG00000001701	NCBP1	99	82.746	Amphiprion_percula
ENSMODG00000003202	NCBP1	99	82.494	ENSATEG00000006929	NCBP1	99	82.368	Anabas_testudineus
ENSMODG00000003202	NCBP1	94	89.564	ENSAPLG00000016318	NCBP1	100	89.696	Anas_platyrhynchos
ENSMODG00000003202	NCBP1	99	86.392	ENSACAG00000004409	NCBP1	87	86.267	Anolis_carolinensis
ENSMODG00000003202	NCBP1	99	92.025	ENSANAG00000025744	NCBP1	99	94.591	Aotus_nancymaae
ENSMODG00000003202	NCBP1	99	82.620	ENSACLG00000014812	NCBP1	99	82.773	Astatotilapia_calliptera
ENSMODG00000003202	NCBP1	99	81.281	ENSAMXG00000016364	NCBP1	99	81.281	Astyanax_mexicanus
ENSMODG00000003202	NCBP1	99	93.291	ENSBTAG00000009732	NCBP1	100	93.544	Bos_taurus
ENSMODG00000003202	NCBP1	99	34.820	WBGene00018156	ncbp-1	99	34.449	Caenorhabditis_elegans
ENSMODG00000003202	NCBP1	99	93.671	ENSCJAG00000010840	NCBP1	100	95.325	Callithrix_jacchus
ENSMODG00000003202	NCBP1	99	93.671	ENSCAFG00000002445	NCBP1	100	93.924	Canis_familiaris
ENSMODG00000003202	NCBP1	97	93.822	ENSCAFG00020017997	NCBP1	100	95.461	Canis_lupus_dingo
ENSMODG00000003202	NCBP1	99	93.038	ENSCHIG00000020139	NCBP1	100	93.291	Capra_hircus
ENSMODG00000003202	NCBP1	52	90.754	ENSTSYG00000011914	NCBP1	98	92.138	Carlito_syrichta
ENSMODG00000003202	NCBP1	80	86.185	ENSCAPG00000014252	NCBP1	90	86.185	Cavia_aperea
ENSMODG00000003202	NCBP1	94	94.024	ENSCPOG00000012573	NCBP1	99	94.290	Cavia_porcellus
ENSMODG00000003202	NCBP1	99	93.671	ENSCCAG00000032297	NCBP1	100	93.924	Cebus_capucinus
ENSMODG00000003202	NCBP1	99	93.544	ENSCATG00000010052	NCBP1	99	95.442	Cercocebus_atys
ENSMODG00000003202	NCBP1	99	93.671	ENSCLAG00000014339	NCBP1	100	93.924	Chinchilla_lanigera
ENSMODG00000003202	NCBP1	99	93.544	ENSCSAG00000010929	NCBP1	100	93.797	Chlorocebus_sabaeus
ENSMODG00000003202	NCBP1	89	94.340	ENSCHOG00000010332	NCBP1	90	94.286	Choloepus_hoffmanni
ENSMODG00000003202	NCBP1	99	85.535	ENSCPBG00000024344	NCBP1	99	89.532	Chrysemys_picta_bellii
ENSMODG00000003202	NCBP1	98	53.866	ENSCING00000008990	-	99	53.485	Ciona_intestinalis
ENSMODG00000003202	NCBP1	98	52.956	ENSCSAVG00000005300	-	99	53.403	Ciona_savignyi
ENSMODG00000003202	NCBP1	99	93.544	ENSCANG00000036913	NCBP1	100	93.797	Colobus_angolensis_palliatus
ENSMODG00000003202	NCBP1	99	93.038	ENSCGRG00001015771	Ncbp1	100	93.291	Cricetulus_griseus_chok1gshd
ENSMODG00000003202	NCBP1	97	93.308	ENSCGRG00000010311	Ncbp1	99	93.565	Cricetulus_griseus_crigri
ENSMODG00000003202	NCBP1	99	82.116	ENSCSEG00000012377	NCBP1	99	82.468	Cynoglossus_semilaevis
ENSMODG00000003202	NCBP1	99	80.377	ENSCVAG00000008795	NCBP1	99	81.006	Cyprinodon_variegatus
ENSMODG00000003202	NCBP1	99	92.911	ENSDNOG00000006885	NCBP1	100	94.583	Dasypus_novemcinctus
ENSMODG00000003202	NCBP1	99	89.169	ENSDORG00000013652	Ncbp1	100	89.421	Dipodomys_ordii
ENSMODG00000003202	NCBP1	99	57.731	FBgn0022942	Cbp80	100	57.606	Drosophila_melanogaster
ENSMODG00000003202	NCBP1	83	33.480	FBgn0038887	CG7907	87	33.480	Drosophila_melanogaster
ENSMODG00000003202	NCBP1	88	91.921	ENSETEG00000009705	NCBP1	89	91.703	Echinops_telfairi
ENSMODG00000003202	NCBP1	99	73.711	ENSEBUG00000008386	NCBP1	100	73.333	Eptatretus_burgeri
ENSMODG00000003202	NCBP1	99	93.165	ENSEASG00005022795	NCBP1	100	93.418	Equus_asinus_asinus
ENSMODG00000003202	NCBP1	99	93.291	ENSECAG00000013847	NCBP1	100	93.544	Equus_caballus
ENSMODG00000003202	NCBP1	94	88.564	ENSEEUG00000015973	NCBP1	99	88.830	Erinaceus_europaeus
ENSMODG00000003202	NCBP1	99	79.874	ENSELUG00000022519	NCBP1	99	80.755	Esox_lucius
ENSMODG00000003202	NCBP1	99	93.544	ENSFCAG00000001206	NCBP1	100	93.797	Felis_catus
ENSMODG00000003202	NCBP1	97	88.662	ENSFALG00000001193	NCBP1	99	88.790	Ficedula_albicollis
ENSMODG00000003202	NCBP1	99	93.544	ENSFDAG00000010864	NCBP1	100	93.797	Fukomys_damarensis
ENSMODG00000003202	NCBP1	99	81.509	ENSFHEG00000000655	NCBP1	99	81.132	Fundulus_heteroclitus
ENSMODG00000003202	NCBP1	99	79.623	ENSGMOG00000008653	NCBP1	99	79.371	Gadus_morhua
ENSMODG00000003202	NCBP1	97	89.589	ENSGALG00000002087	NCBP1	100	89.155	Gallus_gallus
ENSMODG00000003202	NCBP1	99	82.443	ENSGAFG00000017787	NCBP1	99	82.465	Gambusia_affinis
ENSMODG00000003202	NCBP1	99	80.803	ENSGACG00000016772	NCBP1	98	80.678	Gasterosteus_aculeatus
ENSMODG00000003202	NCBP1	97	89.386	ENSGAGG00000019483	NCBP1	99	89.256	Gopherus_agassizii
ENSMODG00000003202	NCBP1	99	93.544	ENSGGOG00000001376	NCBP1	100	93.797	Gorilla_gorilla
ENSMODG00000003202	NCBP1	99	82.620	ENSHBUG00000020843	NCBP1	99	82.494	Haplochromis_burtoni
ENSMODG00000003202	NCBP1	99	81.818	ENSHGLG00000018112	-	100	81.692	Heterocephalus_glaber_female
ENSMODG00000003202	NCBP1	99	93.671	ENSHGLG00000001882	NCBP1	100	93.924	Heterocephalus_glaber_female
ENSMODG00000003202	NCBP1	99	93.671	ENSHGLG00100013014	NCBP1	100	93.924	Heterocephalus_glaber_male
ENSMODG00000003202	NCBP1	99	81.566	ENSHGLG00100017373	-	100	81.439	Heterocephalus_glaber_male
ENSMODG00000003202	NCBP1	76	74.188	ENSHCOG00000000204	NCBP1	91	73.701	Hippocampus_comes
ENSMODG00000003202	NCBP1	99	81.384	ENSIPUG00000007275	ncbp1	99	81.258	Ictalurus_punctatus
ENSMODG00000003202	NCBP1	99	93.797	ENSSTOG00000002695	NCBP1	100	94.051	Ictidomys_tridecemlineatus
ENSMODG00000003202	NCBP1	99	81.486	ENSKMAG00000003594	NCBP1	99	85.336	Kryptolebias_marmoratus
ENSMODG00000003202	NCBP1	99	79.876	ENSLBEG00000011661	NCBP1	99	79.752	Labrus_bergylta
ENSMODG00000003202	NCBP1	99	78.358	ENSLACG00000013955	NCBP1	100	78.607	Latimeria_chalumnae
ENSMODG00000003202	NCBP1	99	71.945	ENSLOCG00000009579	NCBP1	99	71.945	Lepisosteus_oculatus
ENSMODG00000003202	NCBP1	99	93.165	ENSLAFG00000005999	NCBP1	100	93.418	Loxodonta_africana
ENSMODG00000003202	NCBP1	99	93.544	ENSMFAG00000030994	NCBP1	99	95.442	Macaca_fascicularis
ENSMODG00000003202	NCBP1	98	93.342	ENSMMUG00000012281	NCBP1	99	95.442	Macaca_mulatta
ENSMODG00000003202	NCBP1	99	93.544	ENSMNEG00000042790	NCBP1	100	93.797	Macaca_nemestrina
ENSMODG00000003202	NCBP1	99	93.544	ENSMLEG00000030374	NCBP1	100	93.797	Mandrillus_leucophaeus
ENSMODG00000003202	NCBP1	99	82.494	ENSMAMG00000014806	NCBP1	99	82.116	Mastacembelus_armatus
ENSMODG00000003202	NCBP1	96	83.137	ENSMZEG00005009290	-	99	83.137	Maylandia_zebra
ENSMODG00000003202	NCBP1	99	82.620	ENSMZEG00005003469	NCBP1	99	82.494	Maylandia_zebra
ENSMODG00000003202	NCBP1	98	92.611	ENSMAUG00000020583	Ncbp1	99	92.866	Mesocricetus_auratus
ENSMODG00000003202	NCBP1	99	93.165	ENSMICG00000012682	NCBP1	100	93.418	Microcebus_murinus
ENSMODG00000003202	NCBP1	99	92.658	ENSMOCG00000015818	Ncbp1	100	92.911	Microtus_ochrogaster
ENSMODG00000003202	NCBP1	90	81.767	ENSMMOG00000002610	NCBP1	99	81.767	Mola_mola
ENSMODG00000003202	NCBP1	99	81.738	ENSMALG00000003547	NCBP1	99	81.612	Monopterus_albus
ENSMODG00000003202	NCBP1	99	92.911	MGP_CAROLIEiJ_G0025982	Ncbp1	100	93.165	Mus_caroli
ENSMODG00000003202	NCBP1	99	92.911	ENSMUSG00000028330	Ncbp1	100	93.165	Mus_musculus
ENSMODG00000003202	NCBP1	99	93.038	MGP_PahariEiJ_G0028318	Ncbp1	100	93.291	Mus_pahari
ENSMODG00000003202	NCBP1	99	92.911	MGP_SPRETEiJ_G0026945	Ncbp1	100	93.165	Mus_spretus
ENSMODG00000003202	NCBP1	99	93.544	ENSMPUG00000006399	NCBP1	100	93.797	Mustela_putorius_furo
ENSMODG00000003202	NCBP1	97	92.903	ENSMLUG00000015201	NCBP1	99	93.161	Myotis_lucifugus
ENSMODG00000003202	NCBP1	99	93.418	ENSNGAG00000014101	Ncbp1	100	93.291	Nannospalax_galili
ENSMODG00000003202	NCBP1	73	85.463	ENSNBRG00000014674	NCBP1	94	85.463	Neolamprologus_brichardi
ENSMODG00000003202	NCBP1	99	93.544	ENSNLEG00000016909	NCBP1	99	95.442	Nomascus_leucogenys
ENSMODG00000003202	NCBP1	88	100.000	ENSMEUG00000010672	NCBP1	90	100.000	Notamacropus_eugenii
ENSMODG00000003202	NCBP1	83	88.475	ENSOPRG00000002144	-	88	88.814	Ochotona_princeps
ENSMODG00000003202	NCBP1	99	93.544	ENSODEG00000003232	NCBP1	100	93.797	Octodon_degus
ENSMODG00000003202	NCBP1	99	82.620	ENSONIG00000001502	NCBP1	99	82.494	Oreochromis_niloticus
ENSMODG00000003202	NCBP1	78	95.008	ENSOANG00000001918	NCBP1	99	95.008	Ornithorhynchus_anatinus
ENSMODG00000003202	NCBP1	97	93.290	ENSOCUG00000013853	NCBP1	97	93.548	Oryctolagus_cuniculus
ENSMODG00000003202	NCBP1	99	80.326	ENSORLG00000011008	NCBP1	99	80.075	Oryzias_latipes
ENSMODG00000003202	NCBP1	99	80.326	ENSORLG00020017455	NCBP1	99	80.075	Oryzias_latipes_hni
ENSMODG00000003202	NCBP1	99	80.451	ENSORLG00015012127	NCBP1	99	80.201	Oryzias_latipes_hsok
ENSMODG00000003202	NCBP1	99	81.078	ENSOMEG00000020698	NCBP1	99	81.078	Oryzias_melastigma
ENSMODG00000003202	NCBP1	99	93.687	ENSOGAG00000013888	NCBP1	100	93.939	Otolemur_garnettii
ENSMODG00000003202	NCBP1	99	93.038	ENSOARG00000011233	NCBP1	100	93.291	Ovis_aries
ENSMODG00000003202	NCBP1	99	93.544	ENSPPAG00000026462	NCBP1	100	93.797	Pan_paniscus
ENSMODG00000003202	NCBP1	99	93.671	ENSPPRG00000022574	NCBP1	100	93.924	Panthera_pardus
ENSMODG00000003202	NCBP1	99	93.671	ENSPTIG00000018507	NCBP1	100	93.924	Panthera_tigris_altaica
ENSMODG00000003202	NCBP1	99	93.544	ENSPTRG00000021167	NCBP1	100	93.797	Pan_troglodytes
ENSMODG00000003202	NCBP1	99	93.544	ENSPANG00000025591	NCBP1	99	95.442	Papio_anubis
ENSMODG00000003202	NCBP1	99	80.126	ENSPKIG00000015861	NCBP1	100	79.874	Paramormyrops_kingsleyae
ENSMODG00000003202	NCBP1	63	89.258	ENSPSIG00000009558	NCBP1	100	89.453	Pelodiscus_sinensis
ENSMODG00000003202	NCBP1	99	78.742	ENSPMGG00000020476	NCBP1	99	78.616	Periophthalmus_magnuspinnatus
ENSMODG00000003202	NCBP1	99	92.532	ENSPEMG00000020105	Ncbp1	100	92.785	Peromyscus_maniculatus_bairdii
ENSMODG00000003202	NCBP1	99	66.625	ENSPMAG00000005533	NCBP1	100	66.625	Petromyzon_marinus
ENSMODG00000003202	NCBP1	100	99.748	ENSPCIG00000015800	NCBP1	100	99.799	Phascolarctos_cinereus
ENSMODG00000003202	NCBP1	99	81.227	ENSPFOG00000004158	NCBP1	99	81.328	Poecilia_formosa
ENSMODG00000003202	NCBP1	99	81.635	ENSPLAG00000020002	NCBP1	99	81.635	Poecilia_latipinna
ENSMODG00000003202	NCBP1	99	81.635	ENSPMEG00000019821	NCBP1	99	81.635	Poecilia_mexicana
ENSMODG00000003202	NCBP1	99	81.784	ENSPREG00000006035	NCBP1	99	81.533	Poecilia_reticulata
ENSMODG00000003202	NCBP1	99	93.544	ENSPPYG00000019426	NCBP1	100	93.797	Pongo_abelii
ENSMODG00000003202	NCBP1	89	85.498	ENSPCAG00000009943	NCBP1	90	85.714	Procavia_capensis
ENSMODG00000003202	NCBP1	81	94.715	ENSPCOG00000020024	NCBP1	98	95.122	Propithecus_coquereli
ENSMODG00000003202	NCBP1	99	93.038	ENSPVAG00000005924	NCBP1	100	93.291	Pteropus_vampyrus
ENSMODG00000003202	NCBP1	90	82.773	ENSPNYG00000002140	NCBP1	99	82.773	Pundamilia_nyererei
ENSMODG00000003202	NCBP1	99	81.533	ENSPNAG00000027753	NCBP1	99	81.407	Pygocentrus_nattereri
ENSMODG00000003202	NCBP1	99	92.911	ENSRNOG00000023605	Ncbp1	100	93.165	Rattus_norvegicus
ENSMODG00000003202	NCBP1	99	93.544	ENSRBIG00000043175	NCBP1	99	95.442	Rhinopithecus_bieti
ENSMODG00000003202	NCBP1	99	93.544	ENSRROG00000029767	NCBP1	100	93.797	Rhinopithecus_roxellana
ENSMODG00000003202	NCBP1	99	93.671	ENSSBOG00000019378	NCBP1	100	93.924	Saimiri_boliviensis_boliviensis
ENSMODG00000003202	NCBP1	68	100.000	ENSSHAG00000015882	NCBP1	72	100.000	Sarcophilus_harrisii
ENSMODG00000003202	NCBP1	97	80.884	ENSSFOG00015001872	NCBP1	100	80.203	Scleropages_formosus
ENSMODG00000003202	NCBP1	99	80.605	ENSSMAG00000007463	NCBP1	99	80.479	Scophthalmus_maximus
ENSMODG00000003202	NCBP1	99	82.868	ENSSDUG00000007019	NCBP1	100	82.442	Seriola_dumerili
ENSMODG00000003202	NCBP1	99	82.620	ENSSLDG00000021924	NCBP1	99	82.494	Seriola_lalandi_dorsalis
ENSMODG00000003202	NCBP1	84	86.463	ENSSARG00000007274	NCBP1	86	86.900	Sorex_araneus
ENSMODG00000003202	NCBP1	99	81.622	ENSSPUG00000008609	NCBP1	100	81.876	Sphenodon_punctatus
ENSMODG00000003202	NCBP1	99	82.872	ENSSPAG00000012550	NCBP1	99	82.746	Stegastes_partitus
ENSMODG00000003202	NCBP1	99	93.418	ENSSSCG00000005366	NCBP1	100	93.671	Sus_scrofa
ENSMODG00000003202	NCBP1	99	83.145	ENSTGUG00000001472	NCBP1	100	83.270	Taeniopygia_guttata
ENSMODG00000003202	NCBP1	99	81.864	ENSTRUG00000005287	NCBP1	99	81.738	Takifugu_rubripes
ENSMODG00000003202	NCBP1	99	89.873	ENSTBEG00000004035	NCBP1	100	90.127	Tupaia_belangeri
ENSMODG00000003202	NCBP1	87	94.908	ENSTTRG00000000507	NCBP1	88	95.316	Tursiops_truncatus
ENSMODG00000003202	NCBP1	99	93.544	ENSUAMG00000005471	NCBP1	100	93.797	Ursus_americanus
ENSMODG00000003202	NCBP1	96	92.016	ENSUMAG00000011865	NCBP1	100	95.461	Ursus_maritimus
ENSMODG00000003202	NCBP1	99	89.620	ENSVPAG00000010537	NCBP1	100	89.873	Vicugna_pacos
ENSMODG00000003202	NCBP1	99	93.671	ENSVVUG00000019725	NCBP1	100	93.924	Vulpes_vulpes
ENSMODG00000003202	NCBP1	99	80.910	ENSXETG00000010179	ncbp1	100	80.784	Xenopus_tropicalis
ENSMODG00000003202	NCBP1	99	81.635	ENSXMAG00000018253	NCBP1	99	81.635	Xiphophorus_maculatus