EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000003340 (Gene tree)
Gene ID: 100031823
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 39943 bases
Position: chr1:626764286-626804228
Accession: 100031823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000004085	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000004171	RAB1A-201	722	-	ENSMODP00000004085	205 (aa)	XP_007476806	F7CTY1

Gene Model

Click here to download ENSMODG00000003340's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000003340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000003340	RAB1A	80	38.415	ENSMODG00000004590	NRAS	86	38.415
ENSMODG00000003340	RAB1A	99	91.089	ENSMODG00000008371	-	100	91.089
ENSMODG00000003340	RAB1A	82	43.353	ENSMODG00000000118	RAB33B	78	43.353
ENSMODG00000003340	RAB1A	90	48.108	ENSMODG00000008556	RAB2A	99	45.238
ENSMODG00000003340	RAB1A	80	47.619	ENSMODG00000013269	RAB33A	71	47.619
ENSMODG00000003340	RAB1A	77	32.919	ENSMODG00000019295	RAB34	58	32.919
ENSMODG00000003340	RAB1A	90	48.649	ENSMODG00000006121	RAB2B	91	47.959
ENSMODG00000003340	RAB1A	85	51.149	ENSMODG00000003841	-	80	51.149
ENSMODG00000003340	RAB1A	71	37.671	ENSMODG00000016580	HRAS	69	37.671
ENSMODG00000003340	RAB1A	67	33.103	ENSMODG00000024202	ARL4D	70	33.103
ENSMODG00000003340	RAB1A	83	43.678	ENSMODG00000023873	-	79	43.678
ENSMODG00000003340	RAB1A	95	38.660	ENSMODG00000021443	RAB31	97	38.660
ENSMODG00000003340	RAB1A	80	37.576	ENSMODG00000017458	KRAS	95	35.912
ENSMODG00000003340	RAB1A	80	50.909	ENSMODG00000009675	RAB15	78	50.909
ENSMODG00000003340	RAB1A	82	50.296	ENSMODG00000021452	RAB12	50	50.296
ENSMODG00000003340	RAB1A	95	46.154	ENSMODG00000008253	RAB18	93	46.154
ENSMODG00000003340	RAB1A	94	37.436	ENSMODG00000018494	RAB6B	93	37.436
ENSMODG00000003340	RAB1A	100	42.326	ENSMODG00000019649	RAB14	100	42.326
ENSMODG00000003340	RAB1A	57	31.933	ENSMODG00000023112	ARL4C	61	31.933
ENSMODG00000003340	RAB1A	95	36.041	ENSMODG00000008949	RAB17	91	36.041
ENSMODG00000003340	RAB1A	75	38.065	ENSMODG00000010838	-	68	38.065
ENSMODG00000003340	RAB1A	82	38.095	ENSMODG00000018326	CRACR2A	98	38.095
ENSMODG00000003340	RAB1A	68	46.479	ENSMODG00000016498	-	89	46.479
ENSMODG00000003340	RAB1A	95	44.103	ENSMODG00000024936	-	93	44.103
ENSMODG00000003340	RAB1A	84	41.758	ENSMODG00000001915	RAB7B	88	41.758
ENSMODG00000003340	RAB1A	81	50.602	ENSMODG00000004506	RAB30	82	50.602
ENSMODG00000003340	RAB1A	57	34.746	ENSMODG00000000562	ARL8A	66	34.746
ENSMODG00000003340	RAB1A	80	30.233	ENSMODG00000008941	RASL11A	71	30.233
ENSMODG00000003340	RAB1A	81	45.783	ENSMODG00000016955	RAB25	78	45.783
ENSMODG00000003340	RAB1A	94	38.384	ENSMODG00000007600	RAB6A	93	38.384
ENSMODG00000003340	RAB1A	100	50.732	ENSMODG00000017295	-	85	50.732
ENSMODG00000003340	RAB1A	57	34.454	ENSMODG00000014219	ARL4A	59	34.454
ENSMODG00000003340	RAB1A	80	37.576	ENSMODG00000025248	-	95	35.912
ENSMODG00000003340	RAB1A	76	39.623	ENSMODG00000025362	-	79	39.623
ENSMODG00000003340	RAB1A	80	35.329	ENSMODG00000018565	MRAS	80	35.329
ENSMODG00000003340	RAB1A	78	39.264	ENSMODG00000008095	RAB7A	79	39.264
ENSMODG00000003340	RAB1A	95	38.144	ENSMODG00000016544	RAB22A	97	38.144
ENSMODG00000003340	RAB1A	95	43.814	ENSMODG00000014793	RAB5A	85	49.045
ENSMODG00000003340	RAB1A	57	33.058	ENSMODG00000010200	-	61	33.058
ENSMODG00000003340	RAB1A	99	69.802	ENSMODG00000022797	-	100	69.802
ENSMODG00000003340	RAB1A	75	33.333	ENSMODG00000018720	RAB23	73	31.792
ENSMODG00000003340	RAB1A	85	52.299	ENSMODG00000009810	RAB11A	81	52.299
ENSMODG00000003340	RAB1A	76	38.994	ENSMODG00000011531	RAB9B	79	38.994

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000003340	RAB1A	100	99.512	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSMODG00000003340	RAB1A	99	96.040	ENSAPOG00000008143	-	100	96.040	Acanthochromis_polyacanthus
ENSMODG00000003340	RAB1A	100	99.512	ENSAMEG00000001127	RAB1A	100	99.512	Ailuropoda_melanoleuca
ENSMODG00000003340	RAB1A	99	96.040	ENSAOCG00000020606	-	100	96.040	Amphiprion_ocellaris
ENSMODG00000003340	RAB1A	99	96.040	ENSAPEG00000022488	-	100	96.040	Amphiprion_percula
ENSMODG00000003340	RAB1A	100	99.512	ENSANAG00000020929	RAB1A	100	99.512	Aotus_nancymaae
ENSMODG00000003340	RAB1A	99	96.535	ENSACLG00000003326	-	100	96.535	Astatotilapia_calliptera
ENSMODG00000003340	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSMODG00000003340	RAB1A	100	99.512	ENSBTAG00000016720	RAB1A	100	99.512	Bos_taurus
ENSMODG00000003340	RAB1A	100	99.512	ENSCJAG00000046275	RAB1A	100	99.512	Callithrix_jacchus
ENSMODG00000003340	RAB1A	100	99.512	ENSCAFG00000003187	RAB1A	100	99.512	Canis_familiaris
ENSMODG00000003340	RAB1A	100	99.512	ENSCAFG00020026971	RAB1A	100	99.512	Canis_lupus_dingo
ENSMODG00000003340	RAB1A	99	96.585	ENSCHIG00000014060	RAB1A	100	96.585	Capra_hircus
ENSMODG00000003340	RAB1A	100	97.561	ENSTSYG00000005996	RAB1A	100	99.492	Carlito_syrichta
ENSMODG00000003340	RAB1A	100	99.512	ENSCPOG00000015437	RAB1A	100	99.512	Cavia_porcellus
ENSMODG00000003340	RAB1A	100	99.512	ENSCCAG00000021869	RAB1A	100	99.512	Cebus_capucinus
ENSMODG00000003340	RAB1A	100	99.512	ENSCATG00000030853	RAB1A	100	99.512	Cercocebus_atys
ENSMODG00000003340	RAB1A	100	99.512	ENSCLAG00000014766	RAB1A	100	99.512	Chinchilla_lanigera
ENSMODG00000003340	RAB1A	100	100.000	ENSCPBG00000013243	RAB1A	100	100.000	Chrysemys_picta_bellii
ENSMODG00000003340	RAB1A	100	97.073	ENSCANG00000035916	RAB1A	100	97.073	Colobus_angolensis_palliatus
ENSMODG00000003340	RAB1A	100	99.512	ENSCGRG00001012691	-	100	99.512	Cricetulus_griseus_chok1gshd
ENSMODG00000003340	RAB1A	100	99.512	ENSCGRG00000008456	-	100	99.512	Cricetulus_griseus_crigri
ENSMODG00000003340	RAB1A	100	99.512	ENSDNOG00000018236	RAB1A	100	99.512	Dasypus_novemcinctus
ENSMODG00000003340	RAB1A	100	99.512	ENSDORG00000028628	-	100	99.512	Dipodomys_ordii
ENSMODG00000003340	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSMODG00000003340	RAB1A	99	99.505	ENSETEG00000002205	RAB1A	100	99.505	Echinops_telfairi
ENSMODG00000003340	RAB1A	100	99.512	ENSEASG00005007298	RAB1A	100	99.512	Equus_asinus_asinus
ENSMODG00000003340	RAB1A	100	99.512	ENSECAG00000009926	RAB1A	100	99.512	Equus_caballus
ENSMODG00000003340	RAB1A	99	99.505	ENSEEUG00000011721	RAB1A	100	99.505	Erinaceus_europaeus
ENSMODG00000003340	RAB1A	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSMODG00000003340	RAB1A	100	99.512	ENSFCAG00000002536	RAB1A	100	99.512	Felis_catus
ENSMODG00000003340	RAB1A	99	98.030	ENSFALG00000013624	RAB1A	99	98.030	Ficedula_albicollis
ENSMODG00000003340	RAB1A	100	99.512	ENSFDAG00000019505	-	100	99.512	Fukomys_damarensis
ENSMODG00000003340	RAB1A	99	95.050	ENSFHEG00000014414	-	100	95.050	Fundulus_heteroclitus
ENSMODG00000003340	RAB1A	100	100.000	ENSGALG00000031582	RAB1A	100	100.000	Gallus_gallus
ENSMODG00000003340	RAB1A	99	95.050	ENSGAFG00000000918	-	100	95.050	Gambusia_affinis
ENSMODG00000003340	RAB1A	100	100.000	ENSGAGG00000006802	RAB1A	100	100.000	Gopherus_agassizii
ENSMODG00000003340	RAB1A	100	99.512	ENSGGOG00000026603	RAB1A	100	99.512	Gorilla_gorilla
ENSMODG00000003340	RAB1A	100	99.512	ENSHGLG00000013585	RAB1A	100	99.512	Heterocephalus_glaber_female
ENSMODG00000003340	RAB1A	99	97.059	ENSHGLG00100007994	RAB1A	99	97.059	Heterocephalus_glaber_male
ENSMODG00000003340	RAB1A	100	99.512	ENSSTOG00000020693	-	100	99.512	Ictidomys_tridecemlineatus
ENSMODG00000003340	RAB1A	96	99.492	ENSJJAG00000014396	Rab1a	100	99.492	Jaculus_jaculus
ENSMODG00000003340	RAB1A	96	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSMODG00000003340	RAB1A	99	95.545	ENSLBEG00000028426	RAB1A	100	95.545	Labrus_bergylta
ENSMODG00000003340	RAB1A	100	98.049	ENSLACG00000012869	RAB1A	100	98.049	Latimeria_chalumnae
ENSMODG00000003340	RAB1A	100	99.512	ENSLAFG00000016666	RAB1A	100	99.512	Loxodonta_africana
ENSMODG00000003340	RAB1A	100	99.512	ENSMFAG00000046246	RAB1A	100	99.512	Macaca_fascicularis
ENSMODG00000003340	RAB1A	96	99.492	ENSMMUG00000021721	RAB1A	91	99.492	Macaca_mulatta
ENSMODG00000003340	RAB1A	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSMODG00000003340	RAB1A	100	99.512	ENSMLEG00000042535	RAB1A	100	99.512	Mandrillus_leucophaeus
ENSMODG00000003340	RAB1A	99	96.535	ENSMZEG00005013959	-	100	96.535	Maylandia_zebra
ENSMODG00000003340	RAB1A	96	100.000	ENSMGAG00000004611	RAB1A	98	100.000	Meleagris_gallopavo
ENSMODG00000003340	RAB1A	100	99.024	ENSMAUG00000012156	Rab1a	100	99.024	Mesocricetus_auratus
ENSMODG00000003340	RAB1A	100	99.512	ENSMICG00000012587	RAB1A	100	99.512	Microcebus_murinus
ENSMODG00000003340	RAB1A	100	99.024	ENSMOCG00000017022	Rab1a	100	99.024	Microtus_ochrogaster
ENSMODG00000003340	RAB1A	99	94.059	ENSMMOG00000018709	RAB1A	100	94.059	Mola_mola
ENSMODG00000003340	RAB1A	100	99.512	MGP_CAROLIEiJ_G0016115	Rab1a	100	99.512	Mus_caroli
ENSMODG00000003340	RAB1A	100	99.512	ENSMUSG00000020149	Rab1a	100	99.512	Mus_musculus
ENSMODG00000003340	RAB1A	100	99.512	MGP_PahariEiJ_G0016776	Rab1a	100	99.512	Mus_pahari
ENSMODG00000003340	RAB1A	100	99.512	MGP_SPRETEiJ_G0016958	Rab1a	100	99.512	Mus_spretus
ENSMODG00000003340	RAB1A	100	99.512	ENSMPUG00000006139	RAB1A	82	99.512	Mustela_putorius_furo
ENSMODG00000003340	RAB1A	100	99.512	ENSMLUG00000009489	RAB1A	100	99.512	Myotis_lucifugus
ENSMODG00000003340	RAB1A	100	99.512	ENSNGAG00000005838	Rab1a	100	99.512	Nannospalax_galili
ENSMODG00000003340	RAB1A	99	96.535	ENSNBRG00000020492	-	100	96.535	Neolamprologus_brichardi
ENSMODG00000003340	RAB1A	96	99.492	ENSOPRG00000006595	RAB1A	100	99.492	Ochotona_princeps
ENSMODG00000003340	RAB1A	94	99.479	ENSODEG00000011248	-	96	99.479	Octodon_degus
ENSMODG00000003340	RAB1A	99	94.118	ENSONIG00000006819	-	100	94.118	Oreochromis_niloticus
ENSMODG00000003340	RAB1A	100	100.000	ENSOANG00000012438	RAB1A	100	100.000	Ornithorhynchus_anatinus
ENSMODG00000003340	RAB1A	100	99.512	ENSOCUG00000017003	RAB1A	100	99.512	Oryctolagus_cuniculus
ENSMODG00000003340	RAB1A	100	99.512	ENSOGAG00000026181	RAB1A	100	99.512	Otolemur_garnettii
ENSMODG00000003340	RAB1A	96	99.492	ENSOARG00000019997	RAB1A	97	99.492	Ovis_aries
ENSMODG00000003340	RAB1A	99	99.505	ENSPPAG00000030253	RAB1A	100	99.505	Pan_paniscus
ENSMODG00000003340	RAB1A	100	99.512	ENSPPRG00000025077	RAB1A	100	99.512	Panthera_pardus
ENSMODG00000003340	RAB1A	96	99.492	ENSPTIG00000013471	RAB1A	97	99.492	Panthera_tigris_altaica
ENSMODG00000003340	RAB1A	100	99.512	ENSPTRG00000011989	RAB1A	100	99.512	Pan_troglodytes
ENSMODG00000003340	RAB1A	100	99.512	ENSPANG00000010485	RAB1A	100	99.512	Papio_anubis
ENSMODG00000003340	RAB1A	99	97.044	ENSPSIG00000008028	RAB1A	99	97.044	Pelodiscus_sinensis
ENSMODG00000003340	RAB1A	99	96.078	ENSPMGG00000021015	-	99	96.078	Periophthalmus_magnuspinnatus
ENSMODG00000003340	RAB1A	100	99.512	ENSPEMG00000009340	Rab1a	100	99.512	Peromyscus_maniculatus_bairdii
ENSMODG00000003340	RAB1A	100	100.000	ENSPCIG00000023212	RAB1A	100	100.000	Phascolarctos_cinereus
ENSMODG00000003340	RAB1A	99	93.627	ENSPFOG00000000498	-	99	93.627	Poecilia_formosa
ENSMODG00000003340	RAB1A	99	94.554	ENSPLAG00000015592	-	100	94.554	Poecilia_latipinna
ENSMODG00000003340	RAB1A	99	94.554	ENSPMEG00000005288	-	100	94.554	Poecilia_mexicana
ENSMODG00000003340	RAB1A	100	99.512	ENSPPYG00000012360	RAB1A	100	99.512	Pongo_abelii
ENSMODG00000003340	RAB1A	100	99.512	ENSPCOG00000017244	RAB1A	100	99.512	Propithecus_coquereli
ENSMODG00000003340	RAB1A	99	96.535	ENSPNYG00000015841	-	100	96.535	Pundamilia_nyererei
ENSMODG00000003340	RAB1A	100	99.512	ENSRNOG00000004992	Rab1a	100	99.512	Rattus_norvegicus
ENSMODG00000003340	RAB1A	100	99.512	ENSSBOG00000023732	RAB1A	100	99.512	Saimiri_boliviensis_boliviensis
ENSMODG00000003340	RAB1A	98	98.507	ENSSHAG00000003597	RAB1A	98	98.507	Sarcophilus_harrisii
ENSMODG00000003340	RAB1A	99	96.040	ENSSMAG00000021049	-	100	96.040	Scophthalmus_maximus
ENSMODG00000003340	RAB1A	99	96.535	ENSSDUG00000022535	RAB1A	100	96.535	Seriola_dumerili
ENSMODG00000003340	RAB1A	100	100.000	ENSSPUG00000012822	RAB1A	100	100.000	Sphenodon_punctatus
ENSMODG00000003340	RAB1A	99	96.040	ENSSPAG00000012564	-	100	96.040	Stegastes_partitus
ENSMODG00000003340	RAB1A	100	99.512	ENSSSCG00000008359	RAB1A	100	99.512	Sus_scrofa
ENSMODG00000003340	RAB1A	100	97.561	ENSTGUG00000002328	RAB1A	100	97.561	Taeniopygia_guttata
ENSMODG00000003340	RAB1A	99	95.545	ENSTRUG00000024994	RAB1A	100	95.545	Takifugu_rubripes
ENSMODG00000003340	RAB1A	96	99.492	ENSUMAG00000021038	RAB1A	99	99.492	Ursus_maritimus
ENSMODG00000003340	RAB1A	97	98.990	ENSVPAG00000005640	RAB1A	99	98.990	Vicugna_pacos
ENSMODG00000003340	RAB1A	100	99.512	ENSVVUG00000027588	RAB1A	100	99.512	Vulpes_vulpes
ENSMODG00000003340	RAB1A	99	95.050	ENSXMAG00000015776	-	100	95.050	Xiphophorus_maculatus