EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000003411 (Gene tree)
Gene ID: 100017979
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 77965 bases
Position: chr4:375580193-375658157
Accession: 17575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000031808	RRM_5	PF13893.6	2.2e-07	1	2
ENSMODP00000031808	RRM_5	PF13893.6	2.2e-07	2	2
ENSMODP00000031808	RRM_1	PF00076.22	2.6e-43	1	3
ENSMODP00000031808	RRM_1	PF00076.22	2.6e-43	2	3
ENSMODP00000031808	RRM_1	PF00076.22	2.6e-43	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000033382	SPEN-201	10780	-	ENSMODP00000031808	3592 (aa)	-	F6VQG1

Gene Model

Click here to download ENSMODG00000003411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000003411's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000003411	SPEN	100	71.014	ENSG00000065526	SPEN	85	94.048	Homo_sapiens
ENSMODG00000003411	SPEN	66	80.702	ENSAPOG00000011411	si:ch1073-335m2.2	74	80.702	Acanthochromis_polyacanthus
ENSMODG00000003411	SPEN	99	81.461	ENSAPOG00000009853	-	91	75.465	Acanthochromis_polyacanthus
ENSMODG00000003411	SPEN	100	70.737	ENSAMEG00000011817	SPEN	97	70.994	Ailuropoda_melanoleuca
ENSMODG00000003411	SPEN	77	75.556	ENSAOCG00000008077	si:ch1073-335m2.2	70	75.556	Amphiprion_ocellaris
ENSMODG00000003411	SPEN	99	81.461	ENSAOCG00000014505	-	100	45.892	Amphiprion_ocellaris
ENSMODG00000003411	SPEN	65	75.556	ENSAPEG00000013515	si:ch1073-335m2.2	72	75.556	Amphiprion_percula
ENSMODG00000003411	SPEN	99	81.461	ENSAPEG00000010288	-	100	45.928	Amphiprion_percula
ENSMODG00000003411	SPEN	100	45.947	ENSATEG00000005627	-	100	46.314	Anabas_testudineus
ENSMODG00000003411	SPEN	77	63.983	ENSATEG00000007674	si:ch1073-335m2.2	83	63.983	Anabas_testudineus
ENSMODG00000003411	SPEN	99	74.751	ENSAPLG00000012618	SPEN	100	74.910	Anas_platyrhynchos
ENSMODG00000003411	SPEN	99	65.326	ENSACAG00000013761	SPEN	100	65.391	Anolis_carolinensis
ENSMODG00000003411	SPEN	99	70.346	ENSANAG00000034428	SPEN	97	70.530	Aotus_nancymaae
ENSMODG00000003411	SPEN	100	44.745	ENSACLG00000016922	-	100	45.632	Astatotilapia_calliptera
ENSMODG00000003411	SPEN	99	83.240	ENSAMXG00000012485	spen	100	47.547	Astyanax_mexicanus
ENSMODG00000003411	SPEN	100	70.506	ENSCJAG00000008527	SPEN	97	70.690	Callithrix_jacchus
ENSMODG00000003411	SPEN	86	77.795	ENSCAFG00000016132	-	93	77.795	Canis_familiaris
ENSMODG00000003411	SPEN	100	70.742	ENSCHIG00000025070	SPEN	97	70.778	Capra_hircus
ENSMODG00000003411	SPEN	92	67.585	ENSTSYG00000036016	SPEN	96	68.147	Carlito_syrichta
ENSMODG00000003411	SPEN	99	66.199	ENSCAPG00000013803	SPEN	100	66.639	Cavia_aperea
ENSMODG00000003411	SPEN	99	64.904	ENSCPOG00000014036	SPEN	100	65.199	Cavia_porcellus
ENSMODG00000003411	SPEN	100	65.558	ENSCCAG00000020258	SPEN	97	66.558	Cebus_capucinus
ENSMODG00000003411	SPEN	95	99.259	ENSCATG00000015079	SPEN	97	98.529	Cercocebus_atys
ENSMODG00000003411	SPEN	99	65.713	ENSCLAG00000002018	SPEN	100	66.271	Chinchilla_lanigera
ENSMODG00000003411	SPEN	100	71.035	ENSCSAG00000000841	SPEN	97	71.145	Chlorocebus_sabaeus
ENSMODG00000003411	SPEN	100	75.688	ENSCPBG00000010477	SPEN	100	75.881	Chrysemys_picta_bellii
ENSMODG00000003411	SPEN	99	68.900	ENSCANG00000034547	SPEN	97	69.010	Colobus_angolensis_palliatus
ENSMODG00000003411	SPEN	96	49.546	ENSCSEG00000003915	-	99	50.884	Cynoglossus_semilaevis
ENSMODG00000003411	SPEN	83	80.702	ENSCVAG00000009075	si:ch1073-335m2.2	90	80.702	Cyprinodon_variegatus
ENSMODG00000003411	SPEN	100	44.763	ENSCVAG00000016346	-	100	44.943	Cyprinodon_variegatus
ENSMODG00000003411	SPEN	100	45.997	ENSDARG00000074245	spen	100	88.889	Danio_rerio
ENSMODG00000003411	SPEN	54	59.846	ENSDARG00000074332	si:ch1073-335m2.2	57	59.846	Danio_rerio
ENSMODG00000003411	SPEN	100	71.334	ENSDNOG00000041948	SPEN	97	71.334	Dasypus_novemcinctus
ENSMODG00000003411	SPEN	99	63.846	ENSDORG00000023909	Spen	100	63.724	Dipodomys_ordii
ENSMODG00000003411	SPEN	68	96.639	ENSETEG00000016692	-	67	96.250	Echinops_telfairi
ENSMODG00000003411	SPEN	95	99.259	ENSEASG00005015911	SPEN	97	99.259	Equus_asinus_asinus
ENSMODG00000003411	SPEN	95	99.259	ENSECAG00000008833	SPEN	97	99.259	Equus_caballus
ENSMODG00000003411	SPEN	71	90.698	ENSEEUG00000010255	SPEN	76	90.698	Erinaceus_europaeus
ENSMODG00000003411	SPEN	92	80.460	ENSELUG00000007726	si:ch1073-335m2.2	96	80.460	Esox_lucius
ENSMODG00000003411	SPEN	89	71.698	ENSFALG00000003551	SPEN	100	71.915	Ficedula_albicollis
ENSMODG00000003411	SPEN	99	66.815	ENSFDAG00000010212	SPEN	97	67.150	Fukomys_damarensis
ENSMODG00000003411	SPEN	88	78.947	ENSFHEG00000004544	si:ch1073-335m2.2	97	78.947	Fundulus_heteroclitus
ENSMODG00000003411	SPEN	88	69.951	ENSGMOG00000008156	si:ch1073-335m2.2	61	69.951	Gadus_morhua
ENSMODG00000003411	SPEN	94	52.666	ENSGMOG00000008397	-	94	51.777	Gadus_morhua
ENSMODG00000003411	SPEN	100	74.814	ENSGALG00000036932	SPEN	99	74.979	Gallus_gallus
ENSMODG00000003411	SPEN	100	45.099	ENSGAFG00000015819	-	91	73.881	Gambusia_affinis
ENSMODG00000003411	SPEN	85	79.882	ENSGAFG00000021570	si:ch1073-335m2.2	91	79.882	Gambusia_affinis
ENSMODG00000003411	SPEN	100	45.672	ENSGACG00000005341	-	100	45.782	Gasterosteus_aculeatus
ENSMODG00000003411	SPEN	99	96.680	ENSGAGG00000020785	SPEN	100	96.680	Gopherus_agassizii
ENSMODG00000003411	SPEN	75	70.904	ENSGGOG00000012041	SPEN	97	71.087	Gorilla_gorilla
ENSMODG00000003411	SPEN	100	44.838	ENSHBUG00000020626	-	100	45.673	Haplochromis_burtoni
ENSMODG00000003411	SPEN	70	81.287	ENSHBUG00000023253	si:ch1073-335m2.2	86	81.287	Haplochromis_burtoni
ENSMODG00000003411	SPEN	84	72.723	ENSHGLG00000019259	SPEN	84	72.864	Heterocephalus_glaber_female
ENSMODG00000003411	SPEN	77	72.219	ENSHGLG00100019294	SPEN	81	73.106	Heterocephalus_glaber_male
ENSMODG00000003411	SPEN	73	70.430	ENSIPUG00000018212	si:ch1073-335m2.2	56	70.430	Ictalurus_punctatus
ENSMODG00000003411	SPEN	99	82.778	ENSIPUG00000021668	spen	100	45.041	Ictalurus_punctatus
ENSMODG00000003411	SPEN	98	69.268	ENSSTOG00000021428	SPEN	97	69.910	Ictidomys_tridecemlineatus
ENSMODG00000003411	SPEN	100	65.246	ENSJJAG00000010882	Spen	100	66.073	Jaculus_jaculus
ENSMODG00000003411	SPEN	76	79.532	ENSKMAG00000021725	si:ch1073-335m2.2	69	79.532	Kryptolebias_marmoratus
ENSMODG00000003411	SPEN	99	80.899	ENSKMAG00000003882	-	100	45.012	Kryptolebias_marmoratus
ENSMODG00000003411	SPEN	86	40.073	ENSLBEG00000019129	-	100	40.218	Labrus_bergylta
ENSMODG00000003411	SPEN	95	91.925	ENSLACG00000003258	SPEN	99	91.925	Latimeria_chalumnae
ENSMODG00000003411	SPEN	100	54.299	ENSLOCG00000007896	si:ch1073-335m2.2	100	54.623	Lepisosteus_oculatus
ENSMODG00000003411	SPEN	99	70.752	ENSLAFG00000004524	SPEN	97	70.937	Loxodonta_africana
ENSMODG00000003411	SPEN	100	71.025	ENSMFAG00000041974	SPEN	97	71.098	Macaca_fascicularis
ENSMODG00000003411	SPEN	100	71.061	ENSMMUG00000008026	SPEN	97	71.135	Macaca_mulatta
ENSMODG00000003411	SPEN	100	71.098	ENSMNEG00000042402	SPEN	97	71.172	Macaca_nemestrina
ENSMODG00000003411	SPEN	100	70.327	ENSMLEG00000039293	SPEN	97	70.400	Mandrillus_leucophaeus
ENSMODG00000003411	SPEN	52	61.694	ENSMAMG00000023870	si:ch1073-335m2.2	53	61.694	Mastacembelus_armatus
ENSMODG00000003411	SPEN	78	81.287	ENSMZEG00005011762	si:ch1073-335m2.2	95	81.287	Maylandia_zebra
ENSMODG00000003411	SPEN	91	43.043	ENSMZEG00005021491	-	99	43.234	Maylandia_zebra
ENSMODG00000003411	SPEN	80	72.736	ENSMAUG00000008318	Spen	83	72.777	Mesocricetus_auratus
ENSMODG00000003411	SPEN	100	70.910	ENSMICG00000030994	SPEN	97	70.873	Microcebus_murinus
ENSMODG00000003411	SPEN	61	80.117	ENSMMOG00000021742	si:ch1073-335m2.2	69	80.117	Mola_mola
ENSMODG00000003411	SPEN	100	45.577	ENSMALG00000008625	-	100	45.750	Monopterus_albus
ENSMODG00000003411	SPEN	92	90.323	ENSMLUG00000010144	SPEN	99	90.926	Myotis_lucifugus
ENSMODG00000003411	SPEN	98	72.010	ENSNGAG00000000641	Spen	100	72.010	Nannospalax_galili
ENSMODG00000003411	SPEN	86	41.143	ENSNBRG00000022090	-	100	41.214	Neolamprologus_brichardi
ENSMODG00000003411	SPEN	81	81.287	ENSNBRG00000005733	si:ch1073-335m2.2	94	81.287	Neolamprologus_brichardi
ENSMODG00000003411	SPEN	99	70.460	ENSNLEG00000007652	SPEN	97	70.645	Nomascus_leucogenys
ENSMODG00000003411	SPEN	90	100.000	ENSMEUG00000002422	SPEN	91	100.000	Notamacropus_eugenii
ENSMODG00000003411	SPEN	91	77.232	ENSOPRG00000015800	SPEN	91	77.232	Ochotona_princeps
ENSMODG00000003411	SPEN	100	66.309	ENSODEG00000016644	SPEN	100	66.474	Octodon_degus
ENSMODG00000003411	SPEN	100	46.564	ENSONIG00000006573	-	99	80.399	Oreochromis_niloticus
ENSMODG00000003411	SPEN	85	77.049	ENSORLG00000028894	-	98	77.049	Oryzias_latipes
ENSMODG00000003411	SPEN	64	77.049	ENSORLG00020007735	-	98	77.049	Oryzias_latipes_hni
ENSMODG00000003411	SPEN	96	77.049	ENSORLG00015022085	-	98	77.049	Oryzias_latipes_hsok
ENSMODG00000003411	SPEN	96	81.395	ENSOMEG00000007639	-	51	81.395	Oryzias_melastigma
ENSMODG00000003411	SPEN	75	70.509	ENSOGAG00000025110	SPEN	97	70.888	Otolemur_garnettii
ENSMODG00000003411	SPEN	99	70.162	ENSOARG00000008477	SPEN	73	70.199	Ovis_aries
ENSMODG00000003411	SPEN	99	70.750	ENSPPAG00000035690	SPEN	97	70.935	Pan_paniscus
ENSMODG00000003411	SPEN	100	71.087	ENSPTRG00000000210	SPEN	97	71.234	Pan_troglodytes
ENSMODG00000003411	SPEN	100	70.117	ENSPANG00000006293	SPEN	97	70.191	Papio_anubis
ENSMODG00000003411	SPEN	100	48.397	ENSPKIG00000002617	SPEN	91	80.443	Paramormyrops_kingsleyae
ENSMODG00000003411	SPEN	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSMODG00000003411	SPEN	99	74.399	ENSPSIG00000008026	SPEN	100	74.454	Pelodiscus_sinensis
ENSMODG00000003411	SPEN	85	81.065	ENSPFOG00000017986	si:ch1073-335m2.2	90	81.065	Poecilia_formosa
ENSMODG00000003411	SPEN	75	81.065	ENSPLAG00000016625	si:ch1073-335m2.2	90	81.065	Poecilia_latipinna
ENSMODG00000003411	SPEN	100	44.777	ENSPMEG00000006764	-	91	73.507	Poecilia_mexicana
ENSMODG00000003411	SPEN	85	81.065	ENSPMEG00000002674	si:ch1073-335m2.2	90	81.065	Poecilia_mexicana
ENSMODG00000003411	SPEN	83	81.065	ENSPREG00000005357	si:ch1073-335m2.2	90	81.065	Poecilia_reticulata
ENSMODG00000003411	SPEN	100	44.664	ENSPREG00000010399	-	91	73.881	Poecilia_reticulata
ENSMODG00000003411	SPEN	75	70.977	ENSPPYG00000001834	SPEN	97	71.161	Pongo_abelii
ENSMODG00000003411	SPEN	88	74.733	ENSPCAG00000009543	SPEN	89	72.787	Procavia_capensis
ENSMODG00000003411	SPEN	100	69.824	ENSPCOG00000021735	SPEN	97	69.787	Propithecus_coquereli
ENSMODG00000003411	SPEN	82	79.967	ENSPVAG00000013794	SPEN	80	80.082	Pteropus_vampyrus
ENSMODG00000003411	SPEN	100	44.905	ENSPNYG00000012379	-	100	45.739	Pundamilia_nyererei
ENSMODG00000003411	SPEN	99	84.181	ENSPNAG00000020795	spen	86	77.903	Pygocentrus_nattereri
ENSMODG00000003411	SPEN	69	73.656	ENSPNAG00000011452	si:ch1073-335m2.2	72	73.656	Pygocentrus_nattereri
ENSMODG00000003411	SPEN	99	70.724	ENSRBIG00000039654	SPEN	97	70.872	Rhinopithecus_bieti
ENSMODG00000003411	SPEN	99	70.756	ENSRROG00000035686	SPEN	97	70.471	Rhinopithecus_roxellana
ENSMODG00000003411	SPEN	99	90.309	ENSSHAG00000004960	SPEN	99	98.674	Sarcophilus_harrisii
ENSMODG00000003411	SPEN	100	50.078	ENSSFOG00015010267	si:ch1073-335m2.2	100	50.364	Scleropages_formosus
ENSMODG00000003411	SPEN	99	82.022	ENSSMAG00000008996	-	100	45.693	Scophthalmus_maximus
ENSMODG00000003411	SPEN	99	82.584	ENSSDUG00000003476	-	91	75.373	Seriola_dumerili
ENSMODG00000003411	SPEN	67	80.702	ENSSDUG00000008416	si:ch1073-335m2.2	74	80.702	Seriola_dumerili
ENSMODG00000003411	SPEN	99	82.584	ENSSLDG00000012950	-	91	75.373	Seriola_lalandi_dorsalis
ENSMODG00000003411	SPEN	80	80.702	ENSSLDG00000023347	si:ch1073-335m2.2	86	80.702	Seriola_lalandi_dorsalis
ENSMODG00000003411	SPEN	89	93.519	ENSSPUG00000001866	-	100	93.519	Sphenodon_punctatus
ENSMODG00000003411	SPEN	71	80.117	ENSSPAG00000012454	si:ch1073-335m2.2	74	80.117	Stegastes_partitus
ENSMODG00000003411	SPEN	99	81.461	ENSSPAG00000006014	-	91	75.000	Stegastes_partitus
ENSMODG00000003411	SPEN	53	75.275	ENSTRUG00000021008	si:ch1073-335m2.2	63	75.275	Takifugu_rubripes
ENSMODG00000003411	SPEN	100	44.557	ENSTRUG00000024350	-	100	45.234	Takifugu_rubripes
ENSMODG00000003411	SPEN	96	75.000	ENSTNIG00000010907	-	99	75.845	Tetraodon_nigroviridis
ENSMODG00000003411	SPEN	74	98.658	ENSTBEG00000003628	SPEN	73	98.658	Tupaia_belangeri
ENSMODG00000003411	SPEN	81	83.721	ENSTTRG00000015704	SPEN	79	83.721	Tursiops_truncatus
ENSMODG00000003411	SPEN	100	71.057	ENSUAMG00000009600	SPEN	97	71.314	Ursus_americanus
ENSMODG00000003411	SPEN	99	70.059	ENSUMAG00000021641	SPEN	97	70.317	Ursus_maritimus
ENSMODG00000003411	SPEN	95	99.259	ENSVVUG00000028951	SPEN	97	100.000	Vulpes_vulpes
ENSMODG00000003411	SPEN	100	58.100	ENSXETG00000023114	SPEN	100	57.867	Xenopus_tropicalis
ENSMODG00000003411	SPEN	84	74.595	ENSXCOG00000004516	si:ch1073-335m2.2	90	74.595	Xiphophorus_couchianus
ENSMODG00000003411	SPEN	100	44.835	ENSXMAG00000021384	-	90	72.180	Xiphophorus_maculatus
ENSMODG00000003411	SPEN	83	79.882	ENSXMAG00000029887	si:ch1073-335m2.2	90	79.882	Xiphophorus_maculatus