EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000003413 (Gene tree)
Gene ID: 100028627
Gene Symbol: DDX54
Alias: APR-5|DP97|MGC2835
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 13784 bases
Position: chr3:496014059-496027842
Accession: 100028627
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000004177	DBP10CT	PF08147.12	6.6e-18	1	1
ENSMODP00000004177	ResIII	PF04851.15	3.3e-06	1	1
ENSMODP00000004177	DEAD	PF00270.29	1.9e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000004265	DDX54-201	2861	-	ENSMODP00000004177	831 (aa)	XP_007490071	F7GKV2

Gene Model

Click here to download ENSMODG00000003413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000003413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000003413	DDX54	52	32.522	ENSMODG00000000533	DDX18	70	32.522
ENSMODG00000003413	DDX54	53	33.481	ENSMODG00000003745	DDX49	87	33.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000003413	DDX54	99	76.157	ENSG00000123064	DDX54	100	93.750	Homo_sapiens
ENSMODG00000003413	DDX54	95	63.391	ENSAPOG00000008602	ddx54	98	61.718	Acanthochromis_polyacanthus
ENSMODG00000003413	DDX54	99	76.128	ENSAMEG00000008775	DDX54	95	75.505	Ailuropoda_melanoleuca
ENSMODG00000003413	DDX54	98	63.768	ENSACIG00000019104	ddx54	96	64.010	Amphilophus_citrinellus
ENSMODG00000003413	DDX54	95	62.500	ENSAOCG00000008449	ddx54	95	62.424	Amphiprion_ocellaris
ENSMODG00000003413	DDX54	95	62.500	ENSAPEG00000014287	ddx54	95	62.424	Amphiprion_percula
ENSMODG00000003413	DDX54	97	62.740	ENSATEG00000018529	ddx54	95	61.974	Anabas_testudineus
ENSMODG00000003413	DDX54	97	73.177	ENSAPLG00000013191	DDX54	99	72.525	Anas_platyrhynchos
ENSMODG00000003413	DDX54	97	70.798	ENSACAG00000004703	DDX54	96	70.393	Anolis_carolinensis
ENSMODG00000003413	DDX54	99	66.942	ENSANAG00000032761	-	95	66.194	Aotus_nancymaae
ENSMODG00000003413	DDX54	92	68.855	ENSANAG00000032241	-	95	67.927	Aotus_nancymaae
ENSMODG00000003413	DDX54	97	63.370	ENSACLG00000013176	ddx54	95	62.710	Astatotilapia_calliptera
ENSMODG00000003413	DDX54	97	65.037	ENSAMXG00000009189	ddx54	95	64.749	Astyanax_mexicanus
ENSMODG00000003413	DDX54	99	76.162	ENSBTAG00000011930	DDX54	90	75.624	Bos_taurus
ENSMODG00000003413	DDX54	90	46.054	WBGene00022378	Y94H6A.5	96	44.933	Caenorhabditis_elegans
ENSMODG00000003413	DDX54	88	77.868	ENSCJAG00000010039	DDX54	83	75.840	Callithrix_jacchus
ENSMODG00000003413	DDX54	67	70.681	ENSCAFG00000009029	DDX54	99	69.983	Canis_familiaris
ENSMODG00000003413	DDX54	99	76.372	ENSCAFG00020017643	DDX54	94	76.357	Canis_lupus_dingo
ENSMODG00000003413	DDX54	99	74.347	ENSCHIG00000026798	DDX54	95	73.659	Capra_hircus
ENSMODG00000003413	DDX54	97	74.123	ENSTSYG00000007898	DDX54	94	72.848	Carlito_syrichta
ENSMODG00000003413	DDX54	97	74.907	ENSCAPG00000001482	DDX54	99	70.574	Cavia_aperea
ENSMODG00000003413	DDX54	99	75.447	ENSCPOG00000020649	DDX54	95	75.416	Cavia_porcellus
ENSMODG00000003413	DDX54	99	76.611	ENSCCAG00000022625	DDX54	95	76.400	Cebus_capucinus
ENSMODG00000003413	DDX54	99	76.247	ENSCATG00000041943	DDX54	95	75.801	Cercocebus_atys
ENSMODG00000003413	DDX54	99	75.481	ENSCLAG00000010748	DDX54	95	74.519	Chinchilla_lanigera
ENSMODG00000003413	DDX54	100	73.918	ENSCSAG00000002432	DDX54	92	73.450	Chlorocebus_sabaeus
ENSMODG00000003413	DDX54	78	69.360	ENSCPBG00000017982	DDX54	85	69.124	Chrysemys_picta_bellii
ENSMODG00000003413	DDX54	90	52.934	ENSCING00000004789	-	94	52.191	Ciona_intestinalis
ENSMODG00000003413	DDX54	92	51.546	ENSCSAVG00000008916	-	98	68.072	Ciona_savignyi
ENSMODG00000003413	DDX54	91	91.739	ENSCANG00000020637	DDX54	99	90.948	Colobus_angolensis_palliatus
ENSMODG00000003413	DDX54	99	76.077	ENSCGRG00001014803	Ddx54	95	75.957	Cricetulus_griseus_chok1gshd
ENSMODG00000003413	DDX54	99	76.014	ENSCGRG00000002827	Ddx54	95	75.895	Cricetulus_griseus_crigri
ENSMODG00000003413	DDX54	95	61.577	ENSCSEG00000016462	ddx54	95	61.247	Cynoglossus_semilaevis
ENSMODG00000003413	DDX54	97	62.652	ENSCVAG00000022404	ddx54	95	62.379	Cyprinodon_variegatus
ENSMODG00000003413	DDX54	97	64.294	ENSDARG00000105286	ddx54	95	64.927	Danio_rerio
ENSMODG00000003413	DDX54	99	77.431	ENSDNOG00000032913	DDX54	95	77.098	Dasypus_novemcinctus
ENSMODG00000003413	DDX54	83	73.132	ENSDORG00000003399	Ddx54	95	73.132	Dipodomys_ordii
ENSMODG00000003413	DDX54	96	42.087	FBgn0052344	CG32344	88	45.248	Drosophila_melanogaster
ENSMODG00000003413	DDX54	51	95.000	ENSETEG00000008430	-	52	93.662	Echinops_telfairi
ENSMODG00000003413	DDX54	77	61.111	ENSEBUG00000008886	ddx54	91	60.648	Eptatretus_burgeri
ENSMODG00000003413	DDX54	90	73.526	ENSEASG00005009501	DDX54	100	67.618	Equus_asinus_asinus
ENSMODG00000003413	DDX54	99	75.089	ENSECAG00000012890	DDX54	95	82.022	Equus_caballus
ENSMODG00000003413	DDX54	64	93.671	ENSEEUG00000008296	-	58	93.671	Erinaceus_europaeus
ENSMODG00000003413	DDX54	97	62.305	ENSELUG00000013533	ddx54	95	62.410	Esox_lucius
ENSMODG00000003413	DDX54	99	74.167	ENSFCAG00000027806	DDX54	95	74.078	Felis_catus
ENSMODG00000003413	DDX54	94	74.430	ENSFALG00000007737	DDX54	100	73.764	Ficedula_albicollis
ENSMODG00000003413	DDX54	91	83.879	ENSFDAG00000019953	DDX54	94	83.683	Fukomys_damarensis
ENSMODG00000003413	DDX54	97	62.123	ENSFHEG00000018425	ddx54	95	61.790	Fundulus_heteroclitus
ENSMODG00000003413	DDX54	95	61.084	ENSGMOG00000011746	ddx54	98	60.591	Gadus_morhua
ENSMODG00000003413	DDX54	97	73.063	ENSGALG00000007490	DDX54	97	72.593	Gallus_gallus
ENSMODG00000003413	DDX54	97	61.482	ENSGAFG00000010336	ddx54	95	61.491	Gambusia_affinis
ENSMODG00000003413	DDX54	97	60.693	ENSGACG00000016793	ddx54	95	59.976	Gasterosteus_aculeatus
ENSMODG00000003413	DDX54	99	72.135	ENSGAGG00000022803	DDX54	100	73.048	Gopherus_agassizii
ENSMODG00000003413	DDX54	99	76.157	ENSGGOG00000010414	DDX54	95	74.733	Gorilla_gorilla
ENSMODG00000003413	DDX54	99	75.298	ENSHGLG00000014411	DDX54	95	75.357	Heterocephalus_glaber_female
ENSMODG00000003413	DDX54	99	75.388	ENSHGLG00100018511	DDX54	95	75.447	Heterocephalus_glaber_male
ENSMODG00000003413	DDX54	97	62.774	ENSHCOG00000019287	ddx54	95	62.774	Hippocampus_comes
ENSMODG00000003413	DDX54	90	84.190	ENSIPUG00000015556	Ddx54	95	61.818	Ictalurus_punctatus
ENSMODG00000003413	DDX54	91	76.448	ENSSTOG00000004068	DDX54	100	76.190	Ictidomys_tridecemlineatus
ENSMODG00000003413	DDX54	99	77.524	ENSJJAG00000015712	Ddx54	95	77.551	Jaculus_jaculus
ENSMODG00000003413	DDX54	97	61.614	ENSKMAG00000017520	ddx54	95	61.840	Kryptolebias_marmoratus
ENSMODG00000003413	DDX54	97	60.291	ENSLBEG00000019480	ddx54	95	60.291	Labrus_bergylta
ENSMODG00000003413	DDX54	97	68.575	ENSLACG00000008944	DDX54	93	67.784	Latimeria_chalumnae
ENSMODG00000003413	DDX54	99	65.591	ENSLOCG00000008485	ddx54	97	64.929	Lepisosteus_oculatus
ENSMODG00000003413	DDX54	92	67.494	ENSLAFG00000027782	DDX54	100	66.211	Loxodonta_africana
ENSMODG00000003413	DDX54	99	75.919	ENSMFAG00000043636	DDX54	95	75.474	Macaca_fascicularis
ENSMODG00000003413	DDX54	99	75.355	ENSMMUG00000021795	DDX54	95	74.911	Macaca_mulatta
ENSMODG00000003413	DDX54	99	69.104	ENSMNEG00000043605	DDX54	95	68.750	Macaca_nemestrina
ENSMODG00000003413	DDX54	99	72.479	ENSMLEG00000038981	DDX54	95	72.123	Mandrillus_leucophaeus
ENSMODG00000003413	DDX54	97	62.230	ENSMAMG00000012784	ddx54	95	61.916	Mastacembelus_armatus
ENSMODG00000003413	DDX54	97	62.899	ENSMZEG00005018773	ddx54	95	62.123	Maylandia_zebra
ENSMODG00000003413	DDX54	97	71.238	ENSMGAG00000009183	DDX54	100	70.925	Meleagris_gallopavo
ENSMODG00000003413	DDX54	99	76.043	ENSMAUG00000011051	Ddx54	95	76.859	Mesocricetus_auratus
ENSMODG00000003413	DDX54	99	75.779	ENSMICG00000012217	DDX54	95	75.449	Microcebus_murinus
ENSMODG00000003413	DDX54	99	76.464	ENSMOCG00000010835	Ddx54	95	76.379	Microtus_ochrogaster
ENSMODG00000003413	DDX54	95	62.832	ENSMMOG00000009634	ddx54	95	62.376	Mola_mola
ENSMODG00000003413	DDX54	96	64.049	ENSMALG00000022098	ddx54	95	64.128	Monopterus_albus
ENSMODG00000003413	DDX54	99	75.000	MGP_CAROLIEiJ_G0027665	Ddx54	95	74.702	Mus_caroli
ENSMODG00000003413	DDX54	99	75.326	ENSMUSG00000029599	Ddx54	95	75.388	Mus_musculus
ENSMODG00000003413	DDX54	99	75.656	MGP_PahariEiJ_G0024247	Ddx54	95	75.418	Mus_pahari
ENSMODG00000003413	DDX54	99	75.476	MGP_SPRETEiJ_G0028665	Ddx54	95	75.089	Mus_spretus
ENSMODG00000003413	DDX54	99	76.190	ENSMPUG00000002574	DDX54	95	76.100	Mustela_putorius_furo
ENSMODG00000003413	DDX54	50	59.233	ENSMLUG00000029964	-	100	58.753	Myotis_lucifugus
ENSMODG00000003413	DDX54	99	76.850	ENSNGAG00000021313	Ddx54	95	76.253	Nannospalax_galili
ENSMODG00000003413	DDX54	66	81.793	ENSNBRG00000005588	ddx54	70	81.793	Neolamprologus_brichardi
ENSMODG00000003413	DDX54	99	76.162	ENSNLEG00000000162	DDX54	95	75.268	Nomascus_leucogenys
ENSMODG00000003413	DDX54	83	85.610	ENSMEUG00000015392	DDX54	98	86.330	Notamacropus_eugenii
ENSMODG00000003413	DDX54	89	69.323	ENSOPRG00000012000	DDX54	86	69.108	Ochotona_princeps
ENSMODG00000003413	DDX54	99	72.315	ENSODEG00000014863	DDX54	95	71.905	Octodon_degus
ENSMODG00000003413	DDX54	99	73.908	ENSOCUG00000008932	DDX54	95	72.867	Oryctolagus_cuniculus
ENSMODG00000003413	DDX54	97	61.314	ENSORLG00000007385	ddx54	95	61.800	Oryzias_latipes
ENSMODG00000003413	DDX54	97	61.847	ENSORLG00020000858	ddx54	95	62.165	Oryzias_latipes_hni
ENSMODG00000003413	DDX54	97	61.071	ENSORLG00015006956	ddx54	95	61.557	Oryzias_latipes_hsok
ENSMODG00000003413	DDX54	95	62.112	ENSOMEG00000003663	ddx54	96	61.743	Oryzias_melastigma
ENSMODG00000003413	DDX54	99	75.060	ENSOGAG00000004210	DDX54	95	75.090	Otolemur_garnettii
ENSMODG00000003413	DDX54	99	75.416	ENSOARG00000008363	DDX54	95	74.613	Ovis_aries
ENSMODG00000003413	DDX54	99	75.532	ENSPPAG00000042178	DDX54	95	74.586	Pan_paniscus
ENSMODG00000003413	DDX54	99	72.500	ENSPPRG00000005223	DDX54	95	72.447	Panthera_pardus
ENSMODG00000003413	DDX54	63	89.947	ENSPTIG00000019728	DDX54	85	67.718	Panthera_tigris_altaica
ENSMODG00000003413	DDX54	99	75.919	ENSPTRG00000005483	DDX54	95	74.852	Pan_troglodytes
ENSMODG00000003413	DDX54	99	75.355	ENSPANG00000008883	DDX54	95	74.911	Papio_anubis
ENSMODG00000003413	DDX54	97	65.217	ENSPKIG00000018272	ddx54	94	64.741	Paramormyrops_kingsleyae
ENSMODG00000003413	DDX54	56	83.226	ENSPSIG00000005055	DDX54	96	83.226	Pelodiscus_sinensis
ENSMODG00000003413	DDX54	97	59.679	ENSPMGG00000010988	ddx54	99	59.287	Periophthalmus_magnuspinnatus
ENSMODG00000003413	DDX54	99	77.033	ENSPEMG00000016701	Ddx54	95	76.914	Peromyscus_maniculatus_bairdii
ENSMODG00000003413	DDX54	98	62.031	ENSPFOG00000019822	ddx54	95	62.923	Poecilia_formosa
ENSMODG00000003413	DDX54	97	62.136	ENSPLAG00000004530	ddx54	95	62.667	Poecilia_latipinna
ENSMODG00000003413	DDX54	97	62.015	ENSPMEG00000010803	ddx54	95	62.545	Poecilia_mexicana
ENSMODG00000003413	DDX54	97	62.576	ENSPREG00000014372	ddx54	95	62.576	Poecilia_reticulata
ENSMODG00000003413	DDX54	99	75.208	ENSPPYG00000004984	DDX54	95	74.882	Pongo_abelii
ENSMODG00000003413	DDX54	99	71.875	ENSPCAG00000008462	DDX54	95	71.119	Procavia_capensis
ENSMODG00000003413	DDX54	99	75.569	ENSPCOG00000006050	DDX54	95	75.601	Propithecus_coquereli
ENSMODG00000003413	DDX54	91	86.694	ENSPVAG00000017347	DDX54	88	86.345	Pteropus_vampyrus
ENSMODG00000003413	DDX54	98	60.429	ENSPNAG00000014459	ddx54	92	67.400	Pygocentrus_nattereri
ENSMODG00000003413	DDX54	99	77.088	ENSRNOG00000001377	Ddx54	91	76.527	Rattus_norvegicus
ENSMODG00000003413	DDX54	99	75.948	ENSRBIG00000032535	DDX54	95	75.740	Rhinopithecus_bieti
ENSMODG00000003413	DDX54	99	71.834	ENSRROG00000029557	DDX54	95	71.479	Rhinopithecus_roxellana
ENSMODG00000003413	DDX54	91	35.635	YDL031W	-	80	37.157	Saccharomyces_cerevisiae
ENSMODG00000003413	DDX54	99	76.372	ENSSBOG00000028194	DDX54	95	76.162	Saimiri_boliviensis_boliviensis
ENSMODG00000003413	DDX54	97	81.585	ENSSHAG00000015646	DDX54	99	82.742	Sarcophilus_harrisii
ENSMODG00000003413	DDX54	97	65.610	ENSSFOG00015014981	ddx54	95	65.244	Scleropages_formosus
ENSMODG00000003413	DDX54	95	60.599	ENSSMAG00000003210	ddx54	95	60.310	Scophthalmus_maximus
ENSMODG00000003413	DDX54	95	60.219	ENSSDUG00000004474	ddx54	95	61.025	Seriola_dumerili
ENSMODG00000003413	DDX54	95	59.976	ENSSLDG00000010380	ddx54	95	60.073	Seriola_lalandi_dorsalis
ENSMODG00000003413	DDX54	97	72.930	ENSSPUG00000014141	DDX54	94	72.491	Sphenodon_punctatus
ENSMODG00000003413	DDX54	94	61.270	ENSSPAG00000022918	ddx54	97	61.322	Stegastes_partitus
ENSMODG00000003413	DDX54	99	75.862	ENSSSCG00000009876	DDX54	95	75.476	Sus_scrofa
ENSMODG00000003413	DDX54	96	72.208	ENSTGUG00000009126	DDX54	100	71.677	Taeniopygia_guttata
ENSMODG00000003413	DDX54	97	61.391	ENSTRUG00000014939	ddx54	96	61.317	Takifugu_rubripes
ENSMODG00000003413	DDX54	99	60.213	ENSTNIG00000009037	ddx54	96	62.132	Tetraodon_nigroviridis
ENSMODG00000003413	DDX54	76	87.042	ENSTBEG00000003783	DDX54	78	87.042	Tupaia_belangeri
ENSMODG00000003413	DDX54	99	71.767	ENSTTRG00000016678	DDX54	95	71.293	Tursiops_truncatus
ENSMODG00000003413	DDX54	99	76.077	ENSUAMG00000028387	DDX54	99	76.090	Ursus_americanus
ENSMODG00000003413	DDX54	85	86.199	ENSUMAG00000010245	DDX54	95	89.764	Ursus_maritimus
ENSMODG00000003413	DDX54	99	76.253	ENSVVUG00000010212	DDX54	94	76.236	Vulpes_vulpes
ENSMODG00000003413	DDX54	97	67.365	ENSXETG00000016410	ddx54	95	66.545	Xenopus_tropicalis
ENSMODG00000003413	DDX54	97	62.791	ENSXCOG00000002909	ddx54	96	62.301	Xiphophorus_couchianus
ENSMODG00000003413	DDX54	97	63.062	ENSXMAG00000005312	ddx54	96	62.576	Xiphophorus_maculatus