EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000003557 (Gene tree)
Gene ID: 100032963
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 30796 bases
Position: chr2:467014028-467044823
Accession: 100032963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000004346	RTC	PF01137.21	7e-89	1	1
ENSMODP00000004346	RTC_insert	PF05189.13	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000004438	RTCA-201	1753	-	ENSMODP00000004346	366 (aa)	XP_001381874	F7GBC6

Gene Model

Click here to download ENSMODG00000003557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000003557's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000003557	RTCA	100	90.164	ENSG00000137996	RTCA	100	93.878	Homo_sapiens
ENSMODG00000003557	RTCA	99	70.637	ENSAPOG00000001345	rtca	98	70.637	Acanthochromis_polyacanthus
ENSMODG00000003557	RTCA	73	89.963	ENSAMEG00000008855	RTCA	100	89.963	Ailuropoda_melanoleuca
ENSMODG00000003557	RTCA	99	71.468	ENSACIG00000019643	rtca	99	71.468	Amphilophus_citrinellus
ENSMODG00000003557	RTCA	100	70.219	ENSAOCG00000014979	rtca	99	70.219	Amphiprion_ocellaris
ENSMODG00000003557	RTCA	100	70.219	ENSAPEG00000006945	rtca	99	70.219	Amphiprion_percula
ENSMODG00000003557	RTCA	96	70.940	ENSATEG00000006315	rtca	96	70.940	Anabas_testudineus
ENSMODG00000003557	RTCA	96	79.661	ENSAPLG00000015430	RTCA	100	79.661	Anas_platyrhynchos
ENSMODG00000003557	RTCA	100	90.164	ENSANAG00000025446	RTCA	100	90.164	Aotus_nancymaae
ENSMODG00000003557	RTCA	100	69.945	ENSACLG00000020770	rtca	99	69.945	Astatotilapia_calliptera
ENSMODG00000003557	RTCA	100	71.858	ENSAMXG00000043271	rtca	100	71.858	Astyanax_mexicanus
ENSMODG00000003557	RTCA	100	90.984	ENSBTAG00000006321	RTCA	100	90.984	Bos_taurus
ENSMODG00000003557	RTCA	100	89.891	ENSCJAG00000003398	RTCA	100	89.891	Callithrix_jacchus
ENSMODG00000003557	RTCA	100	91.257	ENSCAFG00000020010	RTCA	68	91.257	Canis_familiaris
ENSMODG00000003557	RTCA	100	91.257	ENSCAFG00020011528	RTCA	57	91.257	Canis_lupus_dingo
ENSMODG00000003557	RTCA	100	90.710	ENSCHIG00000018937	RTCA	100	90.710	Capra_hircus
ENSMODG00000003557	RTCA	100	90.164	ENSTSYG00000011305	RTCA	100	90.164	Carlito_syrichta
ENSMODG00000003557	RTCA	100	89.617	ENSCCAG00000021844	RTCA	99	90.691	Cebus_capucinus
ENSMODG00000003557	RTCA	100	87.335	ENSCATG00000019364	RTCA	100	89.644	Cercocebus_atys
ENSMODG00000003557	RTCA	87	89.274	ENSCLAG00000006125	RTCA	100	89.274	Chinchilla_lanigera
ENSMODG00000003557	RTCA	100	90.437	ENSCSAG00000001509	RTCA	100	90.437	Chlorocebus_sabaeus
ENSMODG00000003557	RTCA	99	91.233	ENSCHOG00000005211	RTCA	99	91.233	Choloepus_hoffmanni
ENSMODG00000003557	RTCA	99	85.399	ENSCPBG00000026658	RTCA	99	85.399	Chrysemys_picta_bellii
ENSMODG00000003557	RTCA	98	56.787	ENSCING00000007875	-	98	56.787	Ciona_intestinalis
ENSMODG00000003557	RTCA	98	55.833	ENSCSAVG00000007269	-	98	55.833	Ciona_savignyi
ENSMODG00000003557	RTCA	100	90.164	ENSCANG00000040106	RTCA	100	90.164	Colobus_angolensis_palliatus
ENSMODG00000003557	RTCA	73	88.104	ENSCGRG00001013163	Rtca	85	88.104	Cricetulus_griseus_chok1gshd
ENSMODG00000003557	RTCA	98	68.889	ENSCSEG00000000530	rtca	96	68.889	Cynoglossus_semilaevis
ENSMODG00000003557	RTCA	100	59.016	ENSCVAG00000021809	rtca	100	59.016	Cyprinodon_variegatus
ENSMODG00000003557	RTCA	100	72.404	ENSDARG00000002215	rtca	100	72.404	Danio_rerio
ENSMODG00000003557	RTCA	99	90.959	ENSDNOG00000000456	RTCA	99	90.959	Dasypus_novemcinctus
ENSMODG00000003557	RTCA	100	89.344	ENSDORG00000005448	Rtca	100	89.344	Dipodomys_ordii
ENSMODG00000003557	RTCA	99	39.779	FBgn0025630	Rtca	99	39.779	Drosophila_melanogaster
ENSMODG00000003557	RTCA	95	57.345	ENSEBUG00000008556	rtca	97	57.345	Eptatretus_burgeri
ENSMODG00000003557	RTCA	100	91.530	ENSEASG00005015926	RTCA	100	91.530	Equus_asinus_asinus
ENSMODG00000003557	RTCA	100	91.530	ENSECAG00000019831	RTCA	100	91.530	Equus_caballus
ENSMODG00000003557	RTCA	91	81.503	ENSEEUG00000001165	RTCA	100	81.503	Erinaceus_europaeus
ENSMODG00000003557	RTCA	99	72.022	ENSELUG00000003741	rtca	99	72.022	Esox_lucius
ENSMODG00000003557	RTCA	100	92.077	ENSFCAG00000024460	RTCA	100	92.077	Felis_catus
ENSMODG00000003557	RTCA	93	81.471	ENSFALG00000002443	RTCA	91	81.471	Ficedula_albicollis
ENSMODG00000003557	RTCA	98	69.613	ENSFDAG00000016084	-	100	69.613	Fukomys_damarensis
ENSMODG00000003557	RTCA	100	89.891	ENSFDAG00000012070	-	100	89.891	Fukomys_damarensis
ENSMODG00000003557	RTCA	57	69.378	ENSFHEG00000002868	rtca	90	69.048	Fundulus_heteroclitus
ENSMODG00000003557	RTCA	100	68.852	ENSGMOG00000013264	rtca	100	68.852	Gadus_morhua
ENSMODG00000003557	RTCA	100	81.148	ENSGALG00000005277	RTCA	100	81.148	Gallus_gallus
ENSMODG00000003557	RTCA	100	71.585	ENSGAFG00000011853	rtca	99	71.585	Gambusia_affinis
ENSMODG00000003557	RTCA	100	69.672	ENSGACG00000013497	rtca	100	69.672	Gasterosteus_aculeatus
ENSMODG00000003557	RTCA	80	85.324	ENSGAGG00000023306	RTCA	100	85.324	Gopherus_agassizii
ENSMODG00000003557	RTCA	100	90.164	ENSGGOG00000009546	-	100	90.164	Gorilla_gorilla
ENSMODG00000003557	RTCA	100	89.617	ENSGGOG00000044018	-	100	89.617	Gorilla_gorilla
ENSMODG00000003557	RTCA	100	69.672	ENSHBUG00000002114	rtca	99	69.672	Haplochromis_burtoni
ENSMODG00000003557	RTCA	100	88.798	ENSHGLG00000002617	RTCA	100	88.798	Heterocephalus_glaber_female
ENSMODG00000003557	RTCA	100	88.798	ENSHGLG00100006056	RTCA	100	88.798	Heterocephalus_glaber_male
ENSMODG00000003557	RTCA	100	64.208	ENSHCOG00000020628	rtca	88	64.820	Hippocampus_comes
ENSMODG00000003557	RTCA	100	71.858	ENSIPUG00000024803	rtca	100	71.858	Ictalurus_punctatus
ENSMODG00000003557	RTCA	100	78.747	ENSSTOG00000033099	-	100	78.747	Ictidomys_tridecemlineatus
ENSMODG00000003557	RTCA	100	83.333	ENSSTOG00000013528	-	100	83.333	Ictidomys_tridecemlineatus
ENSMODG00000003557	RTCA	100	63.661	ENSJJAG00000016178	Rtca	100	63.661	Jaculus_jaculus
ENSMODG00000003557	RTCA	99	71.468	ENSKMAG00000006651	rtca	98	71.468	Kryptolebias_marmoratus
ENSMODG00000003557	RTCA	88	69.782	ENSLBEG00000002448	-	99	69.782	Labrus_bergylta
ENSMODG00000003557	RTCA	99	70.637	ENSLBEG00000028971	rtca	99	70.637	Labrus_bergylta
ENSMODG00000003557	RTCA	100	78.415	ENSLACG00000013666	RTCA	100	78.415	Latimeria_chalumnae
ENSMODG00000003557	RTCA	100	75.956	ENSLOCG00000000093	rtca	99	75.956	Lepisosteus_oculatus
ENSMODG00000003557	RTCA	100	90.437	ENSLAFG00000001473	RTCA	100	90.437	Loxodonta_africana
ENSMODG00000003557	RTCA	100	90.437	ENSMFAG00000034132	RTCA	100	90.437	Macaca_fascicularis
ENSMODG00000003557	RTCA	100	89.891	ENSMMUG00000019105	RTCA	100	89.891	Macaca_mulatta
ENSMODG00000003557	RTCA	84	89.644	ENSMNEG00000037163	RTCA	100	89.644	Macaca_nemestrina
ENSMODG00000003557	RTCA	100	74.317	ENSMLEG00000042151	RTCA	100	74.317	Mandrillus_leucophaeus
ENSMODG00000003557	RTCA	100	71.585	ENSMAMG00000016536	rtca	100	71.585	Mastacembelus_armatus
ENSMODG00000003557	RTCA	100	69.945	ENSMZEG00005017945	rtca	99	69.945	Maylandia_zebra
ENSMODG00000003557	RTCA	87	79.937	ENSMGAG00000006892	RTCA	99	79.937	Meleagris_gallopavo
ENSMODG00000003557	RTCA	100	88.798	ENSMAUG00000008488	Rtca	100	88.798	Mesocricetus_auratus
ENSMODG00000003557	RTCA	84	90.615	ENSMICG00000008643	RTCA	100	90.615	Microcebus_murinus
ENSMODG00000003557	RTCA	100	89.071	ENSMOCG00000016660	Rtca	100	89.071	Microtus_ochrogaster
ENSMODG00000003557	RTCA	84	71.336	ENSMMOG00000007750	rtca	99	71.336	Mola_mola
ENSMODG00000003557	RTCA	100	71.858	ENSMALG00000020844	rtca	100	71.858	Monopterus_albus
ENSMODG00000003557	RTCA	100	87.158	MGP_CAROLIEiJ_G0025565	Rtca	100	87.158	Mus_caroli
ENSMODG00000003557	RTCA	100	86.612	ENSMUSG00000000339	Rtca	100	86.620	Mus_musculus
ENSMODG00000003557	RTCA	100	86.885	MGP_PahariEiJ_G0027011	Rtca	100	86.885	Mus_pahari
ENSMODG00000003557	RTCA	100	86.885	MGP_SPRETEiJ_G0026515	Rtca	100	86.885	Mus_spretus
ENSMODG00000003557	RTCA	100	91.803	ENSMPUG00000012119	RTCA	100	91.803	Mustela_putorius_furo
ENSMODG00000003557	RTCA	100	84.196	ENSMLUG00000009922	RTCA	100	84.196	Myotis_lucifugus
ENSMODG00000003557	RTCA	100	88.798	ENSNGAG00000011540	Rtca	99	88.798	Nannospalax_galili
ENSMODG00000003557	RTCA	100	70.219	ENSNBRG00000003062	rtca	99	70.219	Neolamprologus_brichardi
ENSMODG00000003557	RTCA	100	90.437	ENSNLEG00000031426	RTCA	100	90.437	Nomascus_leucogenys
ENSMODG00000003557	RTCA	60	97.727	ENSMEUG00000010030	-	61	97.727	Notamacropus_eugenii
ENSMODG00000003557	RTCA	73	84.387	ENSOPRG00000012092	RTCA	71	84.387	Ochotona_princeps
ENSMODG00000003557	RTCA	95	89.943	ENSODEG00000006990	RTCA	100	87.637	Octodon_degus
ENSMODG00000003557	RTCA	100	69.945	ENSONIG00000007753	rtca	99	69.945	Oreochromis_niloticus
ENSMODG00000003557	RTCA	87	88.328	ENSOANG00000012055	RTCA	98	88.328	Ornithorhynchus_anatinus
ENSMODG00000003557	RTCA	100	91.530	ENSOCUG00000014247	RTCA	100	91.530	Oryctolagus_cuniculus
ENSMODG00000003557	RTCA	100	71.038	ENSORLG00000013605	rtca	100	71.038	Oryzias_latipes
ENSMODG00000003557	RTCA	100	71.038	ENSORLG00020001904	rtca	100	71.038	Oryzias_latipes_hni
ENSMODG00000003557	RTCA	100	71.038	ENSORLG00015021064	rtca	100	71.038	Oryzias_latipes_hsok
ENSMODG00000003557	RTCA	100	71.038	ENSOMEG00000000756	rtca	100	71.038	Oryzias_melastigma
ENSMODG00000003557	RTCA	100	81.421	ENSOGAG00000005627	RTCA	100	81.421	Otolemur_garnettii
ENSMODG00000003557	RTCA	87	89.937	ENSOARG00000018122	RTCA	100	89.937	Ovis_aries
ENSMODG00000003557	RTCA	100	87.335	ENSPPAG00000035119	RTCA	100	89.968	Pan_paniscus
ENSMODG00000003557	RTCA	100	91.803	ENSPPRG00000000350	RTCA	100	91.803	Panthera_pardus
ENSMODG00000003557	RTCA	100	91.803	ENSPTIG00000012816	RTCA	100	91.803	Panthera_tigris_altaica
ENSMODG00000003557	RTCA	100	86.807	ENSPTRG00000001004	RTCA	100	89.320	Pan_troglodytes
ENSMODG00000003557	RTCA	100	90.437	ENSPANG00000000346	RTCA	100	90.437	Papio_anubis
ENSMODG00000003557	RTCA	100	73.497	ENSPKIG00000001653	rtca	100	73.497	Paramormyrops_kingsleyae
ENSMODG00000003557	RTCA	100	84.973	ENSPSIG00000011408	RTCA	100	84.973	Pelodiscus_sinensis
ENSMODG00000003557	RTCA	100	88.798	ENSPEMG00000018582	Rtca	100	88.798	Peromyscus_maniculatus_bairdii
ENSMODG00000003557	RTCA	100	56.403	ENSPMAG00000009110	rtca	100	56.403	Petromyzon_marinus
ENSMODG00000003557	RTCA	100	96.721	ENSPCIG00000007684	RTCA	100	96.721	Phascolarctos_cinereus
ENSMODG00000003557	RTCA	100	71.935	ENSPFOG00000004824	rtca	100	71.935	Poecilia_formosa
ENSMODG00000003557	RTCA	100	72.131	ENSPLAG00000011753	rtca	99	72.131	Poecilia_latipinna
ENSMODG00000003557	RTCA	100	72.131	ENSPMEG00000020469	rtca	99	72.131	Poecilia_mexicana
ENSMODG00000003557	RTCA	100	72.951	ENSPREG00000001365	rtca	99	72.951	Poecilia_reticulata
ENSMODG00000003557	RTCA	100	90.164	ENSPPYG00000001115	RTCA	100	90.164	Pongo_abelii
ENSMODG00000003557	RTCA	100	86.612	ENSPCAG00000005076	RTCA	100	86.612	Procavia_capensis
ENSMODG00000003557	RTCA	100	91.257	ENSPCOG00000005603	RTCA	100	91.257	Propithecus_coquereli
ENSMODG00000003557	RTCA	100	87.335	ENSPVAG00000009478	RTCA	100	87.335	Pteropus_vampyrus
ENSMODG00000003557	RTCA	100	69.945	ENSPNYG00000004722	rtca	99	69.945	Pundamilia_nyererei
ENSMODG00000003557	RTCA	100	72.404	ENSPNAG00000022270	rtca	100	72.404	Pygocentrus_nattereri
ENSMODG00000003557	RTCA	100	87.158	ENSRNOG00000014575	Rtca	100	87.158	Rattus_norvegicus
ENSMODG00000003557	RTCA	100	86.544	ENSRBIG00000041180	RTCA	100	88.673	Rhinopithecus_bieti
ENSMODG00000003557	RTCA	100	89.617	ENSRROG00000024929	RTCA	100	89.617	Rhinopithecus_roxellana
ENSMODG00000003557	RTCA	100	89.071	ENSSBOG00000028626	RTCA	100	89.071	Saimiri_boliviensis_boliviensis
ENSMODG00000003557	RTCA	100	97.268	ENSSHAG00000001758	RTCA	100	97.268	Sarcophilus_harrisii
ENSMODG00000003557	RTCA	98	69.468	ENSSMAG00000014680	rtca	96	69.468	Scophthalmus_maximus
ENSMODG00000003557	RTCA	98	71.989	ENSSDUG00000015585	rtca	96	71.989	Seriola_dumerili
ENSMODG00000003557	RTCA	95	72.126	ENSSLDG00000018985	rtca	94	72.126	Seriola_lalandi_dorsalis
ENSMODG00000003557	RTCA	87	83.912	ENSSARG00000013993	RTCA	100	83.912	Sorex_araneus
ENSMODG00000003557	RTCA	100	69.945	ENSSPAG00000011938	rtca	99	69.945	Stegastes_partitus
ENSMODG00000003557	RTCA	100	90.984	ENSSSCG00000006865	RTCA	100	90.984	Sus_scrofa
ENSMODG00000003557	RTCA	100	81.967	ENSTGUG00000005154	RTCA	100	81.967	Taeniopygia_guttata
ENSMODG00000003557	RTCA	100	71.585	ENSTRUG00000008799	rtca	100	71.585	Takifugu_rubripes
ENSMODG00000003557	RTCA	100	71.311	ENSTNIG00000004725	rtca	100	71.311	Tetraodon_nigroviridis
ENSMODG00000003557	RTCA	59	79.091	ENSTBEG00000000943	RTCA	82	63.025	Tupaia_belangeri
ENSMODG00000003557	RTCA	100	86.807	ENSTTRG00000015327	RTCA	100	86.807	Tursiops_truncatus
ENSMODG00000003557	RTCA	94	89.796	ENSUAMG00000017265	RTCA	96	89.796	Ursus_americanus
ENSMODG00000003557	RTCA	100	90.710	ENSUMAG00000007881	RTCA	100	90.710	Ursus_maritimus
ENSMODG00000003557	RTCA	87	81.073	ENSVPAG00000001039	RTCA	84	81.073	Vicugna_pacos
ENSMODG00000003557	RTCA	100	90.984	ENSVVUG00000022041	RTCA	68	90.984	Vulpes_vulpes
ENSMODG00000003557	RTCA	99	66.027	ENSXETG00000031661	RTCA	99	66.027	Xenopus_tropicalis
ENSMODG00000003557	RTCA	100	62.842	ENSXCOG00000008002	rtca	100	62.842	Xiphophorus_couchianus
ENSMODG00000003557	RTCA	100	71.858	ENSXMAG00000005482	rtca	99	71.858	Xiphophorus_maculatus