EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000003646 (Gene tree)
Gene ID: 100032957
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 25186 bases
Position: chr2:466849949-466875134
Accession: 100032957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000004462	TRM13	PF05206.14	8.6e-92	1	1
ENSMODP00000004462	zf-U11-48K	PF05253.12	1.3e-09	1	1
ENSMODP00000004462	zf-TRM13_CCCH	PF11722.8	2.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000004559	TRMT13-201	2264	-	ENSMODP00000004462	484 (aa)	XP_001381868	F7B009

Gene Model

Click here to download ENSMODG00000003646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000003646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000003646	TRMT13	100	76.082	ENSG00000122435	TRMT13	100	76.082	Homo_sapiens
ENSMODG00000003646	TRMT13	96	48.207	ENSAPOG00000015131	trmt13	99	48.406	Acanthochromis_polyacanthus
ENSMODG00000003646	TRMT13	99	75.826	ENSAMEG00000008917	TRMT13	99	75.826	Ailuropoda_melanoleuca
ENSMODG00000003646	TRMT13	96	51.255	ENSACIG00000005804	trmt13	97	49.897	Amphilophus_citrinellus
ENSMODG00000003646	TRMT13	96	47.835	ENSAOCG00000023585	trmt13	99	47.835	Amphiprion_ocellaris
ENSMODG00000003646	TRMT13	96	48.031	ENSAPEG00000004025	trmt13	99	48.031	Amphiprion_percula
ENSMODG00000003646	TRMT13	97	50.628	ENSATEG00000006597	trmt13	97	50.628	Anabas_testudineus
ENSMODG00000003646	TRMT13	88	67.599	ENSAPLG00000014924	TRMT13	99	67.599	Anas_platyrhynchos
ENSMODG00000003646	TRMT13	96	64.086	ENSACAG00000003498	TRMT13	98	64.086	Anolis_carolinensis
ENSMODG00000003646	TRMT13	100	75.670	ENSANAG00000019525	TRMT13	100	76.991	Aotus_nancymaae
ENSMODG00000003646	TRMT13	98	52.192	ENSACLG00000020018	trmt13	100	52.192	Astatotilapia_calliptera
ENSMODG00000003646	TRMT13	96	52.521	ENSAMXG00000017963	trmt13	98	53.992	Astyanax_mexicanus
ENSMODG00000003646	TRMT13	100	77.160	ENSBTAG00000015781	TRMT13	100	77.160	Bos_taurus
ENSMODG00000003646	TRMT13	100	74.639	ENSCJAG00000000200	TRMT13	90	87.218	Callithrix_jacchus
ENSMODG00000003646	TRMT13	65	74.603	ENSCAFG00000020021	TRMT13	99	74.603	Canis_familiaris
ENSMODG00000003646	TRMT13	57	84.672	ENSCAFG00020011572	TRMT13	94	83.929	Canis_lupus_dingo
ENSMODG00000003646	TRMT13	100	77.572	ENSCHIG00000015395	TRMT13	100	77.572	Capra_hircus
ENSMODG00000003646	TRMT13	98	70.231	ENSTSYG00000010811	TRMT13	95	80.000	Carlito_syrichta
ENSMODG00000003646	TRMT13	72	59.375	ENSCAPG00000009085	TRMT13	95	59.943	Cavia_aperea
ENSMODG00000003646	TRMT13	100	74.691	ENSCPOG00000000694	TRMT13	100	74.691	Cavia_porcellus
ENSMODG00000003646	TRMT13	100	75.464	ENSCCAG00000023772	TRMT13	100	76.106	Cebus_capucinus
ENSMODG00000003646	TRMT13	100	75.670	ENSCATG00000033556	TRMT13	100	76.106	Cercocebus_atys
ENSMODG00000003646	TRMT13	88	73.239	ENSCLAG00000008220	TRMT13	100	73.474	Chinchilla_lanigera
ENSMODG00000003646	TRMT13	100	76.337	ENSCSAG00000001506	TRMT13	100	76.337	Chlorocebus_sabaeus
ENSMODG00000003646	TRMT13	100	69.215	ENSCPBG00000026671	TRMT13	100	69.215	Chrysemys_picta_bellii
ENSMODG00000003646	TRMT13	100	75.876	ENSCANG00000034659	TRMT13	100	76.991	Colobus_angolensis_palliatus
ENSMODG00000003646	TRMT13	99	74.274	ENSCGRG00001021601	Trmt13	99	74.274	Cricetulus_griseus_chok1gshd
ENSMODG00000003646	TRMT13	53	70.155	ENSCGRG00000000093	-	99	70.155	Cricetulus_griseus_crigri
ENSMODG00000003646	TRMT13	96	48.922	ENSCSEG00000000591	trmt13	97	48.922	Cynoglossus_semilaevis
ENSMODG00000003646	TRMT13	97	49.080	ENSCVAG00000017342	trmt13	95	49.388	Cyprinodon_variegatus
ENSMODG00000003646	TRMT13	97	56.170	ENSDARG00000102846	trmt13	98	56.170	Danio_rerio
ENSMODG00000003646	TRMT13	57	82.734	ENSDNOG00000001710	TRMT13	85	82.734	Dasypus_novemcinctus
ENSMODG00000003646	TRMT13	99	73.554	ENSDORG00000015808	Trmt13	99	73.554	Dipodomys_ordii
ENSMODG00000003646	TRMT13	97	33.402	FBgn0037435	CG18048	96	33.402	Drosophila_melanogaster
ENSMODG00000003646	TRMT13	99	64.092	ENSETEG00000005819	TRMT13	99	64.092	Echinops_telfairi
ENSMODG00000003646	TRMT13	95	45.788	ENSEBUG00000014444	trmt13	97	45.591	Eptatretus_burgeri
ENSMODG00000003646	TRMT13	100	77.113	ENSEASG00005015918	TRMT13	100	77.113	Equus_asinus_asinus
ENSMODG00000003646	TRMT13	100	76.907	ENSECAG00000022626	TRMT13	100	76.907	Equus_caballus
ENSMODG00000003646	TRMT13	77	73.052	ENSEEUG00000000294	TRMT13	77	73.052	Erinaceus_europaeus
ENSMODG00000003646	TRMT13	96	53.249	ENSELUG00000003803	trmt13	98	53.459	Esox_lucius
ENSMODG00000003646	TRMT13	100	76.543	ENSFCAG00000030618	TRMT13	100	77.876	Felis_catus
ENSMODG00000003646	TRMT13	96	66.524	ENSFALG00000002424	TRMT13	96	66.524	Ficedula_albicollis
ENSMODG00000003646	TRMT13	99	76.715	ENSFDAG00000006342	TRMT13	99	76.715	Fukomys_damarensis
ENSMODG00000003646	TRMT13	78	52.442	ENSFHEG00000022954	trmt13	99	50.488	Fundulus_heteroclitus
ENSMODG00000003646	TRMT13	95	48.472	ENSGMOG00000013223	trmt13	100	48.052	Gadus_morhua
ENSMODG00000003646	TRMT13	95	66.377	ENSGALG00000005290	TRMT13	96	66.594	Gallus_gallus
ENSMODG00000003646	TRMT13	77	50.781	ENSGAFG00000001577	trmt13	82	50.781	Gambusia_affinis
ENSMODG00000003646	TRMT13	98	48.548	ENSGACG00000013428	trmt13	97	49.893	Gasterosteus_aculeatus
ENSMODG00000003646	TRMT13	100	69.897	ENSGAGG00000023303	TRMT13	99	74.194	Gopherus_agassizii
ENSMODG00000003646	TRMT13	100	75.876	ENSGGOG00000005616	TRMT13	100	75.876	Gorilla_gorilla
ENSMODG00000003646	TRMT13	98	52.401	ENSHBUG00000007754	trmt13	100	52.401	Haplochromis_burtoni
ENSMODG00000003646	TRMT13	99	77.083	ENSHGLG00000002164	TRMT13	99	77.083	Heterocephalus_glaber_female
ENSMODG00000003646	TRMT13	99	77.083	ENSHGLG00100001618	TRMT13	99	77.083	Heterocephalus_glaber_male
ENSMODG00000003646	TRMT13	95	47.234	ENSHCOG00000020553	trmt13	97	47.346	Hippocampus_comes
ENSMODG00000003646	TRMT13	96	55.172	ENSIPUG00000024787	trmt13	98	55.172	Ictalurus_punctatus
ENSMODG00000003646	TRMT13	100	76.907	ENSSTOG00000013483	TRMT13	100	76.907	Ictidomys_tridecemlineatus
ENSMODG00000003646	TRMT13	97	75.636	ENSJJAG00000018012	Trmt13	98	75.636	Jaculus_jaculus
ENSMODG00000003646	TRMT13	63	49.175	ENSKMAG00000007639	trmt13	92	49.175	Kryptolebias_marmoratus
ENSMODG00000003646	TRMT13	97	48.548	ENSLBEG00000020238	trmt13	100	48.548	Labrus_bergylta
ENSMODG00000003646	TRMT13	96	62.076	ENSLACG00000013153	TRMT13	100	61.728	Latimeria_chalumnae
ENSMODG00000003646	TRMT13	96	58.710	ENSLOCG00000000418	trmt13	97	58.710	Lepisosteus_oculatus
ENSMODG00000003646	TRMT13	76	74.054	ENSLAFG00000002383	TRMT13	100	74.054	Loxodonta_africana
ENSMODG00000003646	TRMT13	100	76.132	ENSMFAG00000034681	TRMT13	100	76.991	Macaca_fascicularis
ENSMODG00000003646	TRMT13	100	76.132	ENSMMUG00000004243	TRMT13	100	76.991	Macaca_mulatta
ENSMODG00000003646	TRMT13	100	76.132	ENSMNEG00000036102	TRMT13	100	76.991	Macaca_nemestrina
ENSMODG00000003646	TRMT13	100	75.926	ENSMLEG00000034258	TRMT13	100	76.106	Mandrillus_leucophaeus
ENSMODG00000003646	TRMT13	96	50.105	ENSMAMG00000016597	trmt13	98	50.105	Mastacembelus_armatus
ENSMODG00000003646	TRMT13	98	51.983	ENSMZEG00005020959	trmt13	100	51.983	Maylandia_zebra
ENSMODG00000003646	TRMT13	88	66.901	ENSMGAG00000006970	TRMT13	100	66.901	Meleagris_gallopavo
ENSMODG00000003646	TRMT13	97	75.212	ENSMAUG00000010448	Trmt13	97	75.212	Mesocricetus_auratus
ENSMODG00000003646	TRMT13	100	75.876	ENSMICG00000005283	TRMT13	100	76.106	Microcebus_murinus
ENSMODG00000003646	TRMT13	96	73.019	ENSMOCG00000019914	Trmt13	96	73.019	Microtus_ochrogaster
ENSMODG00000003646	TRMT13	55	47.794	ENSMMOG00000007762	trmt13	90	47.794	Mola_mola
ENSMODG00000003646	TRMT13	99	49.385	ENSMALG00000020965	trmt13	99	50.000	Monopterus_albus
ENSMODG00000003646	TRMT13	99	73.278	MGP_CAROLIEiJ_G0025568	Trmt13	94	82.143	Mus_caroli
ENSMODG00000003646	TRMT13	99	73.333	ENSMUSG00000033439	Trmt13	94	83.333	Mus_musculus
ENSMODG00000003646	TRMT13	99	73.333	MGP_PahariEiJ_G0027014	Trmt13	93	83.133	Mus_pahari
ENSMODG00000003646	TRMT13	99	73.542	MGP_SPRETEiJ_G0026518	Trmt13	94	83.333	Mus_spretus
ENSMODG00000003646	TRMT13	79	74.474	ENSMPUG00000002078	-	100	74.474	Mustela_putorius_furo
ENSMODG00000003646	TRMT13	100	70.370	ENSMLUG00000002124	TRMT13	100	70.370	Myotis_lucifugus
ENSMODG00000003646	TRMT13	99	48.347	ENSNBRG00000006783	trmt13	99	48.347	Neolamprologus_brichardi
ENSMODG00000003646	TRMT13	100	75.464	ENSNLEG00000035917	TRMT13	100	76.106	Nomascus_leucogenys
ENSMODG00000003646	TRMT13	52	79.283	ENSMEUG00000013346	-	100	79.283	Notamacropus_eugenii
ENSMODG00000003646	TRMT13	66	81.159	ENSOPRG00000012048	TRMT13	66	81.159	Ochotona_princeps
ENSMODG00000003646	TRMT13	98	51.346	ENSONIG00000004574	trmt13	100	51.346	Oreochromis_niloticus
ENSMODG00000003646	TRMT13	88	70.629	ENSOANG00000012057	TRMT13	99	70.629	Ornithorhynchus_anatinus
ENSMODG00000003646	TRMT13	100	75.620	ENSOCUG00000023095	TRMT13	100	75.620	Oryctolagus_cuniculus
ENSMODG00000003646	TRMT13	96	47.158	ENSORLG00000003320	trmt13	99	47.479	Oryzias_latipes
ENSMODG00000003646	TRMT13	95	47.222	ENSORLG00020005972	trmt13	98	47.412	Oryzias_latipes_hni
ENSMODG00000003646	TRMT13	96	50.947	ENSORLG00015002270	trmt13	99	50.947	Oryzias_latipes_hsok
ENSMODG00000003646	TRMT13	98	51.255	ENSOMEG00000006724	trmt13	95	51.464	Oryzias_melastigma
ENSMODG00000003646	TRMT13	98	77.521	ENSOGAG00000005618	TRMT13	97	76.543	Otolemur_garnettii
ENSMODG00000003646	TRMT13	100	77.572	ENSOARG00000017983	TRMT13	100	77.572	Ovis_aries
ENSMODG00000003646	TRMT13	100	76.082	ENSPPAG00000043736	TRMT13	100	76.082	Pan_paniscus
ENSMODG00000003646	TRMT13	100	76.749	ENSPPRG00000003424	TRMT13	100	77.876	Panthera_pardus
ENSMODG00000003646	TRMT13	100	76.749	ENSPTIG00000018598	TRMT13	100	77.876	Panthera_tigris_altaica
ENSMODG00000003646	TRMT13	100	75.876	ENSPTRG00000001001	TRMT13	100	75.876	Pan_troglodytes
ENSMODG00000003646	TRMT13	100	75.876	ENSPANG00000007598	TRMT13	100	76.991	Papio_anubis
ENSMODG00000003646	TRMT13	97	53.945	ENSPKIG00000001514	trmt13	99	53.945	Paramormyrops_kingsleyae
ENSMODG00000003646	TRMT13	87	68.333	ENSPSIG00000012703	TRMT13	99	68.333	Pelodiscus_sinensis
ENSMODG00000003646	TRMT13	98	50.526	ENSPMGG00000013298	trmt13	96	50.526	Periophthalmus_magnuspinnatus
ENSMODG00000003646	TRMT13	99	71.281	ENSPEMG00000000275	Trmt13	99	71.281	Peromyscus_maniculatus_bairdii
ENSMODG00000003646	TRMT13	95	46.985	ENSPMAG00000000823	trmt13	98	46.985	Petromyzon_marinus
ENSMODG00000003646	TRMT13	100	88.660	ENSPCIG00000007699	TRMT13	100	88.660	Phascolarctos_cinereus
ENSMODG00000003646	TRMT13	99	47.925	ENSPFOG00000008675	trmt13	98	47.925	Poecilia_formosa
ENSMODG00000003646	TRMT13	96	47.899	ENSPLAG00000009709	trmt13	99	47.899	Poecilia_latipinna
ENSMODG00000003646	TRMT13	96	47.579	ENSPMEG00000022954	trmt13	99	47.579	Poecilia_mexicana
ENSMODG00000003646	TRMT13	77	51.436	ENSPREG00000005645	trmt13	92	51.237	Poecilia_reticulata
ENSMODG00000003646	TRMT13	100	75.464	ENSPPYG00000001120	TRMT13	100	75.464	Pongo_abelii
ENSMODG00000003646	TRMT13	97	75.957	ENSPCAG00000002340	TRMT13	97	75.957	Procavia_capensis
ENSMODG00000003646	TRMT13	100	75.720	ENSPCOG00000017984	TRMT13	100	76.106	Propithecus_coquereli
ENSMODG00000003646	TRMT13	100	76.495	ENSPVAG00000017430	TRMT13	100	76.495	Pteropus_vampyrus
ENSMODG00000003646	TRMT13	98	50.104	ENSPNYG00000013690	trmt13	100	50.104	Pundamilia_nyererei
ENSMODG00000003646	TRMT13	96	54.390	ENSPNAG00000022130	trmt13	98	54.390	Pygocentrus_nattereri
ENSMODG00000003646	TRMT13	99	74.220	ENSRNOG00000015140	Trmt13	96	74.220	Rattus_norvegicus
ENSMODG00000003646	TRMT13	100	75.876	ENSRBIG00000037686	TRMT13	100	76.991	Rhinopithecus_bieti
ENSMODG00000003646	TRMT13	100	75.876	ENSRROG00000044057	TRMT13	100	76.991	Rhinopithecus_roxellana
ENSMODG00000003646	TRMT13	100	75.670	ENSSBOG00000026541	TRMT13	100	76.991	Saimiri_boliviensis_boliviensis
ENSMODG00000003646	TRMT13	89	90.092	ENSSHAG00000005213	TRMT13	96	90.092	Sarcophilus_harrisii
ENSMODG00000003646	TRMT13	97	51.386	ENSSFOG00015017560	trmt13	98	52.128	Scleropages_formosus
ENSMODG00000003646	TRMT13	99	49.592	ENSSMAG00000014592	trmt13	99	49.592	Scophthalmus_maximus
ENSMODG00000003646	TRMT13	98	48.875	ENSSDUG00000015508	trmt13	99	48.594	Seriola_dumerili
ENSMODG00000003646	TRMT13	99	48.497	ENSSLDG00000019060	trmt13	99	48.497	Seriola_lalandi_dorsalis
ENSMODG00000003646	TRMT13	96	70.085	ENSSARG00000010344	TRMT13	98	70.085	Sorex_araneus
ENSMODG00000003646	TRMT13	96	66.524	ENSSPUG00000016339	TRMT13	100	66.524	Sphenodon_punctatus
ENSMODG00000003646	TRMT13	96	51.357	ENSSPAG00000011922	trmt13	99	51.240	Stegastes_partitus
ENSMODG00000003646	TRMT13	100	77.778	ENSSSCG00000006869	TRMT13	100	77.778	Sus_scrofa
ENSMODG00000003646	TRMT13	97	65.254	ENSTGUG00000005253	TRMT13	100	65.254	Taeniopygia_guttata
ENSMODG00000003646	TRMT13	96	49.364	ENSTRUG00000008400	trmt13	99	49.163	Takifugu_rubripes
ENSMODG00000003646	TRMT13	86	61.631	ENSTBEG00000008911	TRMT13	100	61.631	Tupaia_belangeri
ENSMODG00000003646	TRMT13	50	85.897	ENSTTRG00000015302	-	60	85.897	Tursiops_truncatus
ENSMODG00000003646	TRMT13	99	71.074	ENSUAMG00000017251	TRMT13	99	71.074	Ursus_americanus
ENSMODG00000003646	TRMT13	99	75.620	ENSUMAG00000007901	TRMT13	99	77.367	Ursus_maritimus
ENSMODG00000003646	TRMT13	89	62.125	ENSVPAG00000001034	TRMT13	100	62.125	Vicugna_pacos
ENSMODG00000003646	TRMT13	99	77.131	ENSVVUG00000021996	TRMT13	98	77.131	Vulpes_vulpes
ENSMODG00000003646	TRMT13	98	53.862	ENSXETG00000013204	trmt13	99	53.862	Xenopus_tropicalis
ENSMODG00000003646	TRMT13	96	48.225	ENSXMAG00000010765	trmt13	99	48.225	Xiphophorus_maculatus