EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000003801 (Gene tree)
Gene ID: 100017511
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 133684 bases
Position: chr3:460359248-460492931
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000004654	HnRNP_M	PF11532.8	1.3e-16	1	1
ENSMODP00000004654	RRM_1	PF00076.22	2e-51	1	3
ENSMODP00000004654	RRM_1	PF00076.22	2e-51	2	3
ENSMODP00000004654	RRM_1	PF00076.22	2e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000033721	-	2445	-	ENSMODP00000032145	402 (aa)	-	F7D756
ENSMODT00000004754	-	2862	-	ENSMODP00000004654	730 (aa)	-	F6ZK16

Gene Model

Click here to download ENSMODG00000003801's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000003801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000003801	-	58	63.158	ENSMODG00000002744	MYEF2	57	63.158
ENSMODG00000003801	-	99	80.945	ENSMODG00000003473	-	100	80.798

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000003801	-	98	89.182	ENSG00000099783	HNRNPM	94	95.652	Homo_sapiens
ENSMODG00000003801	-	91	53.395	ENSAPOG00000001463	hnrnpm	93	51.772	Acanthochromis_polyacanthus
ENSMODG00000003801	-	98	88.504	ENSAMEG00000004979	HNRNPM	100	88.420	Ailuropoda_melanoleuca
ENSMODG00000003801	-	94	54.741	ENSAOCG00000008519	hnrnpm	99	53.073	Amphiprion_ocellaris
ENSMODG00000003801	-	96	54.371	ENSAPEG00000004257	hnrnpm	99	51.802	Amphiprion_percula
ENSMODG00000003801	-	97	53.297	ENSATEG00000008976	hnrnpm	97	52.812	Anabas_testudineus
ENSMODG00000003801	-	95	72.496	ENSAPLG00000010149	HNRNPM	100	72.419	Anas_platyrhynchos
ENSMODG00000003801	-	98	75.000	ENSANAG00000019489	-	97	71.977	Aotus_nancymaae
ENSMODG00000003801	-	98	89.598	ENSANAG00000025358	HNRNPM	100	88.965	Aotus_nancymaae
ENSMODG00000003801	-	94	52.180	ENSACLG00000020495	hnrnpm	99	51.657	Astatotilapia_calliptera
ENSMODG00000003801	-	94	54.446	ENSAMXG00000016073	hnrnpm	97	54.321	Astyanax_mexicanus
ENSMODG00000003801	-	61	53.086	ENSBTAG00000048355	-	99	53.086	Bos_taurus
ENSMODG00000003801	-	98	89.182	ENSBTAG00000021039	HNRNPM	100	89.101	Bos_taurus
ENSMODG00000003801	-	98	88.627	ENSCJAG00000010802	HNRNPM	100	88.556	Callithrix_jacchus
ENSMODG00000003801	-	98	83.518	ENSCAFG00000018524	HNRNPM	93	83.515	Canis_familiaris
ENSMODG00000003801	-	98	85.097	ENSCAFG00020022128	HNRNPM	99	84.919	Canis_lupus_dingo
ENSMODG00000003801	-	98	83.356	ENSCHIG00000026313	HNRNPM	100	83.379	Capra_hircus
ENSMODG00000003801	-	100	74.444	ENSTSYG00000037074	-	93	80.808	Carlito_syrichta
ENSMODG00000003801	-	95	89.943	ENSTSYG00000011487	-	100	88.153	Carlito_syrichta
ENSMODG00000003801	-	96	67.321	ENSTSYG00000030502	-	99	70.580	Carlito_syrichta
ENSMODG00000003801	-	91	81.185	ENSCAPG00000011505	HNRNPM	100	80.488	Cavia_aperea
ENSMODG00000003801	-	98	88.766	ENSCPOG00000015182	HNRNPM	100	88.965	Cavia_porcellus
ENSMODG00000003801	-	98	88.089	ENSCCAG00000018782	HNRNPM	100	88.027	Cebus_capucinus
ENSMODG00000003801	-	90	76.393	ENSCCAG00000018580	-	100	75.738	Cebus_capucinus
ENSMODG00000003801	-	98	89.182	ENSCATG00000035478	HNRNPM	100	89.101	Cercocebus_atys
ENSMODG00000003801	-	100	64.305	ENSCLAG00000003049	-	100	64.169	Chinchilla_lanigera
ENSMODG00000003801	-	98	88.766	ENSCLAG00000011194	-	100	88.965	Chinchilla_lanigera
ENSMODG00000003801	-	98	80.360	ENSCSAG00000008009	HNRNPM	100	81.114	Chlorocebus_sabaeus
ENSMODG00000003801	-	98	88.520	ENSCHOG00000013627	HNRNPM	100	88.420	Choloepus_hoffmanni
ENSMODG00000003801	-	91	79.327	ENSCPBG00000017052	-	100	78.365	Chrysemys_picta_bellii
ENSMODG00000003801	-	86	61.189	ENSCANG00000041671	-	98	69.245	Colobus_angolensis_palliatus
ENSMODG00000003801	-	95	87.840	ENSCANG00000043491	HNRNPM	99	87.697	Colobus_angolensis_palliatus
ENSMODG00000003801	-	100	67.623	ENSCGRG00001008003	-	100	65.629	Cricetulus_griseus_chok1gshd
ENSMODG00000003801	-	98	76.422	ENSCGRG00001022655	-	100	76.839	Cricetulus_griseus_chok1gshd
ENSMODG00000003801	-	96	88.304	ENSCGRG00001012021	-	94	87.643	Cricetulus_griseus_chok1gshd
ENSMODG00000003801	-	100	57.123	ENSCGRG00001004249	-	100	55.479	Cricetulus_griseus_chok1gshd
ENSMODG00000003801	-	96	69.547	ENSCGRG00001004486	-	99	69.016	Cricetulus_griseus_chok1gshd
ENSMODG00000003801	-	100	67.623	ENSCGRG00000012006	-	100	65.629	Cricetulus_griseus_crigri
ENSMODG00000003801	-	96	69.547	ENSCGRG00000003596	-	99	69.016	Cricetulus_griseus_crigri
ENSMODG00000003801	-	98	76.117	ENSCGRG00000010065	-	93	76.586	Cricetulus_griseus_crigri
ENSMODG00000003801	-	98	87.795	ENSCGRG00000012441	-	100	87.330	Cricetulus_griseus_crigri
ENSMODG00000003801	-	94	52.230	ENSCSEG00000014980	hnrnpm	98	51.802	Cynoglossus_semilaevis
ENSMODG00000003801	-	94	51.884	ENSDARG00000061735	hnrnpm	100	58.712	Danio_rerio
ENSMODG00000003801	-	98	84.973	ENSDNOG00000012157	HNRNPM	92	85.752	Dasypus_novemcinctus
ENSMODG00000003801	-	98	89.350	ENSDORG00000008105	Hnrnpm	100	89.237	Dipodomys_ordii
ENSMODG00000003801	-	98	87.101	ENSETEG00000019712	HNRNPM	100	87.330	Echinops_telfairi
ENSMODG00000003801	-	98	83.634	ENSEASG00005022434	HNRNPM	91	83.651	Equus_asinus_asinus
ENSMODG00000003801	-	98	83.634	ENSECAG00000023868	HNRNPM	91	83.651	Equus_caballus
ENSMODG00000003801	-	52	76.852	ENSEEUG00000001929	-	65	76.852	Erinaceus_europaeus
ENSMODG00000003801	-	98	53.785	ENSELUG00000021183	hnrnpm	100	52.632	Esox_lucius
ENSMODG00000003801	-	98	85.734	ENSFCAG00000015218	HNRNPM	100	85.714	Felis_catus
ENSMODG00000003801	-	95	70.056	ENSFALG00000001059	HNRNPM	98	70.711	Ficedula_albicollis
ENSMODG00000003801	-	98	89.043	ENSFDAG00000014680	HNRNPM	100	88.692	Fukomys_damarensis
ENSMODG00000003801	-	95	54.197	ENSFHEG00000006712	hnrnpm	95	53.451	Fundulus_heteroclitus
ENSMODG00000003801	-	93	52.489	ENSGMOG00000009724	hnrnpm	98	51.351	Gadus_morhua
ENSMODG00000003801	-	95	72.931	ENSGALG00000000377	HNRNPM	99	71.771	Gallus_gallus
ENSMODG00000003801	-	95	52.069	ENSGAFG00000013798	hnrnpm	91	66.400	Gambusia_affinis
ENSMODG00000003801	-	94	58.345	ENSGACG00000010265	hnrnpm	100	56.011	Gasterosteus_aculeatus
ENSMODG00000003801	-	91	79.006	ENSGAGG00000019124	-	100	78.045	Gopherus_agassizii
ENSMODG00000003801	-	98	89.182	ENSGGOG00000003498	HNRNPM	100	89.101	Gorilla_gorilla
ENSMODG00000003801	-	94	53.053	ENSHBUG00000023451	hnrnpm	99	53.186	Haplochromis_burtoni
ENSMODG00000003801	-	92	93.985	ENSHGLG00000009796	-	100	93.836	Heterocephalus_glaber_female
ENSMODG00000003801	-	98	87.656	ENSHGLG00100006675	-	100	87.738	Heterocephalus_glaber_male
ENSMODG00000003801	-	94	53.933	ENSHCOG00000019984	hnrnpm	99	53.814	Hippocampus_comes
ENSMODG00000003801	-	94	55.650	ENSIPUG00000025097	hnrnpm	96	53.793	Ictalurus_punctatus
ENSMODG00000003801	-	98	89.459	ENSSTOG00000008112	HNRNPM	100	89.373	Ictidomys_tridecemlineatus
ENSMODG00000003801	-	98	87.967	ENSJJAG00000017319	Hnrnpm	100	87.875	Jaculus_jaculus
ENSMODG00000003801	-	96	52.133	ENSKMAG00000022136	hnrnpm	71	53.472	Kryptolebias_marmoratus
ENSMODG00000003801	-	82	65.359	ENSLBEG00000004545	hnrnpm	95	52.126	Labrus_bergylta
ENSMODG00000003801	-	98	56.022	ENSLOCG00000004456	hnrnpm	99	56.552	Lepisosteus_oculatus
ENSMODG00000003801	-	98	88.072	ENSLAFG00000013603	HNRNPM	100	87.057	Loxodonta_africana
ENSMODG00000003801	-	98	89.182	ENSMFAG00000037617	HNRNPM	100	89.101	Macaca_fascicularis
ENSMODG00000003801	-	98	89.182	ENSMMUG00000018806	HNRNPM	94	95.652	Macaca_mulatta
ENSMODG00000003801	-	98	89.182	ENSMNEG00000036546	HNRNPM	100	89.101	Macaca_nemestrina
ENSMODG00000003801	-	98	89.182	ENSMLEG00000042113	HNRNPM	100	89.101	Mandrillus_leucophaeus
ENSMODG00000003801	-	96	53.681	ENSMAMG00000005612	hnrnpm	94	52.949	Mastacembelus_armatus
ENSMODG00000003801	-	94	55.357	ENSMZEG00005002512	hnrnpm	95	54.875	Maylandia_zebra
ENSMODG00000003801	-	95	80.863	ENSMGAG00000000700	HNRNPM	100	79.568	Meleagris_gallopavo
ENSMODG00000003801	-	98	88.904	ENSMAUG00000017476	Hnrnpm	100	88.828	Mesocricetus_auratus
ENSMODG00000003801	-	98	78.225	ENSMICG00000028503	-	100	77.213	Microcebus_murinus
ENSMODG00000003801	-	98	89.043	ENSMICG00000002532	-	100	88.965	Microcebus_murinus
ENSMODG00000003801	-	98	88.904	ENSMOCG00000005769	Hnrnpm	100	88.556	Microtus_ochrogaster
ENSMODG00000003801	-	94	51.040	ENSMMOG00000019610	hnrnpm	96	53.191	Mola_mola
ENSMODG00000003801	-	94	52.695	ENSMALG00000014280	hnrnpm	99	51.200	Monopterus_albus
ENSMODG00000003801	-	98	88.488	MGP_CAROLIEiJ_G0021413	Hnrnpm	100	88.420	Mus_caroli
ENSMODG00000003801	-	98	88.072	ENSMUSG00000059208	Hnrnpm	100	88.011	Mus_musculus
ENSMODG00000003801	-	100	88.420	MGP_PahariEiJ_G0020418	Hnrnpm	100	88.283	Mus_pahari
ENSMODG00000003801	-	98	88.211	MGP_SPRETEiJ_G0022325	Hnrnpm	100	88.147	Mus_spretus
ENSMODG00000003801	-	98	78.721	ENSMPUG00000007241	HNRNPM	92	79.563	Mustela_putorius_furo
ENSMODG00000003801	-	98	84.605	ENSMLUG00000006696	-	98	84.060	Myotis_lucifugus
ENSMODG00000003801	-	98	83.792	ENSMLUG00000025231	-	97	83.792	Myotis_lucifugus
ENSMODG00000003801	-	100	58.767	ENSNGAG00000017657	-	100	58.719	Nannospalax_galili
ENSMODG00000003801	-	98	88.766	ENSNGAG00000003707	Hnrnpm	100	88.692	Nannospalax_galili
ENSMODG00000003801	-	94	54.150	ENSNBRG00000015999	hnrnpm	99	54.017	Neolamprologus_brichardi
ENSMODG00000003801	-	100	94.247	ENSMEUG00000004789	HNRNPM	100	94.247	Notamacropus_eugenii
ENSMODG00000003801	-	93	90.141	ENSOPRG00000001943	HNRNPM	72	95.000	Ochotona_princeps
ENSMODG00000003801	-	93	87.284	ENSODEG00000010314	-	100	84.337	Octodon_degus
ENSMODG00000003801	-	92	83.333	ENSODEG00000011442	-	100	84.106	Octodon_degus
ENSMODG00000003801	-	92	70.266	ENSODEG00000004347	-	100	70.414	Octodon_degus
ENSMODG00000003801	-	100	72.071	ENSODEG00000009194	-	100	71.837	Octodon_degus
ENSMODG00000003801	-	94	55.062	ENSONIG00000001758	hnrnpm	99	56.155	Oreochromis_niloticus
ENSMODG00000003801	-	84	90.135	ENSOANG00000010259	HNRNPM	100	89.910	Ornithorhynchus_anatinus
ENSMODG00000003801	-	98	81.553	ENSOCUG00000000552	-	98	82.834	Oryctolagus_cuniculus
ENSMODG00000003801	-	59	74.170	ENSOCUG00000023204	-	99	75.636	Oryctolagus_cuniculus
ENSMODG00000003801	-	98	76.699	ENSOCUG00000024611	-	98	69.919	Oryctolagus_cuniculus
ENSMODG00000003801	-	94	51.771	ENSORLG00000005400	hnrnpm	97	53.621	Oryzias_latipes
ENSMODG00000003801	-	96	51.617	ENSORLG00020022108	hnrnpm	99	53.621	Oryzias_latipes_hni
ENSMODG00000003801	-	98	51.769	ENSOMEG00000013075	hnrnpm	98	53.297	Oryzias_melastigma
ENSMODG00000003801	-	98	83.911	ENSOGAG00000030987	HNRNPM	98	83.924	Otolemur_garnettii
ENSMODG00000003801	-	66	62.814	ENSOGAG00000032900	-	98	60.804	Otolemur_garnettii
ENSMODG00000003801	-	98	83.241	ENSOARG00000003961	HNRNPM	100	81.471	Ovis_aries
ENSMODG00000003801	-	98	89.182	ENSPPAG00000039365	HNRNPM	100	89.101	Pan_paniscus
ENSMODG00000003801	-	98	89.320	ENSPPRG00000009284	HNRNPM	100	89.237	Panthera_pardus
ENSMODG00000003801	-	95	86.925	ENSPTIG00000003024	HNRNPM	95	86.782	Panthera_tigris_altaica
ENSMODG00000003801	-	98	89.182	ENSPTRG00000010424	HNRNPM	100	89.101	Pan_troglodytes
ENSMODG00000003801	-	98	89.182	ENSPANG00000000283	HNRNPM	100	89.101	Papio_anubis
ENSMODG00000003801	-	95	56.250	ENSPKIG00000001332	hnrnpm	99	57.004	Paramormyrops_kingsleyae
ENSMODG00000003801	-	95	74.370	ENSPSIG00000011477	HNRNPM	100	73.950	Pelodiscus_sinensis
ENSMODG00000003801	-	95	51.344	ENSPMGG00000012793	hnrnpm	99	49.398	Periophthalmus_magnuspinnatus
ENSMODG00000003801	-	98	89.043	ENSPEMG00000009260	Hnrnpm	100	88.965	Peromyscus_maniculatus_bairdii
ENSMODG00000003801	-	100	94.384	ENSPCIG00000020115	HNRNPM	100	88.764	Phascolarctos_cinereus
ENSMODG00000003801	-	95	54.696	ENSPFOG00000013612	hnrnpm	97	54.266	Poecilia_formosa
ENSMODG00000003801	-	94	49.459	ENSPLAG00000011139	hnrnpm	97	51.026	Poecilia_latipinna
ENSMODG00000003801	-	95	46.335	ENSPMEG00000011182	hnrnpm	97	49.796	Poecilia_mexicana
ENSMODG00000003801	-	99	51.344	ENSPREG00000016114	hnrnpm	98	52.075	Poecilia_reticulata
ENSMODG00000003801	-	98	83.773	ENSPPYG00000009506	HNRNPM	100	83.787	Pongo_abelii
ENSMODG00000003801	-	98	87.933	ENSPCAG00000009678	HNRNPM	100	87.738	Procavia_capensis
ENSMODG00000003801	-	98	89.043	ENSPCOG00000020227	HNRNPM	100	88.965	Propithecus_coquereli
ENSMODG00000003801	-	98	87.692	ENSPVAG00000009647	HNRNPM	100	87.632	Pteropus_vampyrus
ENSMODG00000003801	-	94	51.417	ENSPNYG00000006542	hnrnpm	99	51.236	Pundamilia_nyererei
ENSMODG00000003801	-	94	56.545	ENSPNAG00000020740	hnrnpm	97	55.355	Pygocentrus_nattereri
ENSMODG00000003801	-	98	88.766	ENSRNOG00000007921	Hnrnpm	100	88.692	Rattus_norvegicus
ENSMODG00000003801	-	98	79.473	ENSRBIG00000041503	HNRNPM	100	86.237	Rhinopithecus_bieti
ENSMODG00000003801	-	98	81.241	ENSRBIG00000039870	-	99	81.157	Rhinopithecus_bieti
ENSMODG00000003801	-	98	89.043	ENSRROG00000038240	-	100	88.965	Rhinopithecus_roxellana
ENSMODG00000003801	-	98	83.356	ENSRROG00000033189	-	96	85.531	Rhinopithecus_roxellana
ENSMODG00000003801	-	86	74.595	ENSSBOG00000022413	-	99	78.559	Saimiri_boliviensis_boliviensis
ENSMODG00000003801	-	100	88.828	ENSSBOG00000032416	HNRNPM	100	88.692	Saimiri_boliviensis_boliviensis
ENSMODG00000003801	-	91	90.099	ENSSHAG00000005864	HNRNPM	100	91.560	Sarcophilus_harrisii
ENSMODG00000003801	-	94	56.938	ENSSFOG00015008815	hnrnpm	97	55.119	Scleropages_formosus
ENSMODG00000003801	-	94	54.137	ENSSMAG00000003992	hnrnpm	99	52.140	Scophthalmus_maximus
ENSMODG00000003801	-	94	55.385	ENSSDUG00000002188	hnrnpm	91	70.690	Seriola_dumerili
ENSMODG00000003801	-	82	98.592	ENSSARG00000000267	HNRNPM	72	98.592	Sorex_araneus
ENSMODG00000003801	-	95	74.116	ENSSPUG00000002270	HNRNPM	98	71.250	Sphenodon_punctatus
ENSMODG00000003801	-	95	52.381	ENSSPAG00000023132	hnrnpm	99	52.486	Stegastes_partitus
ENSMODG00000003801	-	98	87.761	ENSSSCG00000013602	HNRNPM	100	88.762	Sus_scrofa
ENSMODG00000003801	-	86	75.217	ENSTGUG00000000938	HNRNPM	100	74.350	Taeniopygia_guttata
ENSMODG00000003801	-	94	54.990	ENSTRUG00000013783	hnrnpm	98	51.705	Takifugu_rubripes
ENSMODG00000003801	-	92	57.674	ENSTNIG00000015530	hnrnpm	100	54.148	Tetraodon_nigroviridis
ENSMODG00000003801	-	66	98.639	ENSTBEG00000008718	HNRNPM	69	98.639	Tupaia_belangeri
ENSMODG00000003801	-	98	84.605	ENSTTRG00000009769	HNRNPM	100	84.605	Tursiops_truncatus
ENSMODG00000003801	-	98	87.481	ENSUAMG00000005710	HNRNPM	99	87.408	Ursus_americanus
ENSMODG00000003801	-	88	85.739	ENSUMAG00000014575	HNRNPM	100	85.565	Ursus_maritimus
ENSMODG00000003801	-	98	77.811	ENSVPAG00000004215	HNRNPM	100	78.824	Vicugna_pacos
ENSMODG00000003801	-	98	82.265	ENSVVUG00000024984	HNRNPM	99	83.016	Vulpes_vulpes
ENSMODG00000003801	-	94	60.801	ENSXETG00000001777	hnrnpm	100	59.828	Xenopus_tropicalis
ENSMODG00000003801	-	55	49.708	ENSXMAG00000018502	hnrnpm	94	51.570	Xiphophorus_maculatus