EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000003841 (Gene tree)
Gene ID: 100025384
Gene Symbol: -
Alias: -
Full Name: RAB11B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 40566 bases
Position: chr3:460434464-460475029
Accession: 100025384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000004707	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000004807	-	657	-	ENSMODP00000004707	218 (aa)	XP_007489529	F7EBP6

Gene Model

Click here to download ENSMODG00000003841's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo04144	Endocytosis	KEGG
mdo04152	AMPK signaling pathway	KEGG
mdo04962	Vasopressin-regulated water reabsorption	KEGG
mdo05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000003841's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000003841	-	85	37.696	ENSMODG00000000118	RAB33B	83	37.696
ENSMODG00000003841	-	83	43.085	ENSMODG00000024936	-	91	43.085
ENSMODG00000003841	-	96	39.524	ENSMODG00000004506	RAB30	97	39.524
ENSMODG00000003841	-	83	43.646	ENSMODG00000009675	RAB15	85	43.646
ENSMODG00000003841	-	100	89.908	ENSMODG00000009810	RAB11A	100	89.908
ENSMODG00000003841	-	93	38.164	ENSMODG00000023873	-	93	38.164
ENSMODG00000003841	-	89	33.500	ENSMODG00000007600	RAB6A	92	33.500
ENSMODG00000003841	-	73	36.875	ENSMODG00000018720	RAB23	75	36.313
ENSMODG00000003841	-	71	32.278	ENSMODG00000001915	RAB7B	79	32.278
ENSMODG00000003841	-	78	46.784	ENSMODG00000008949	RAB17	79	46.784
ENSMODG00000003841	-	96	47.619	ENSMODG00000008371	-	99	47.619
ENSMODG00000003841	-	73	38.750	ENSMODG00000018326	CRACR2A	95	38.750
ENSMODG00000003841	-	61	30.657	ENSMODG00000014219	ARL4A	66	30.657
ENSMODG00000003841	-	77	40.462	ENSMODG00000011531	RAB9B	86	40.462
ENSMODG00000003841	-	70	35.484	ENSMODG00000004590	NRAS	87	36.527
ENSMODG00000003841	-	76	47.273	ENSMODG00000017295	-	69	47.273
ENSMODG00000003841	-	72	36.306	ENSMODG00000010838	-	70	36.306
ENSMODG00000003841	-	89	31.000	ENSMODG00000018494	RAB6B	92	31.000
ENSMODG00000003841	-	99	60.829	ENSMODG00000016955	RAB25	99	60.829
ENSMODG00000003841	-	62	48.551	ENSMODG00000016498	-	86	48.551
ENSMODG00000003841	-	94	41.262	ENSMODG00000014793	RAB5A	85	49.045
ENSMODG00000003841	-	78	54.971	ENSMODG00000008556	RAB2A	81	54.971
ENSMODG00000003841	-	65	30.282	ENSMODG00000000562	ARL8A	77	30.282
ENSMODG00000003841	-	72	40.491	ENSMODG00000008095	RAB7A	78	40.491
ENSMODG00000003841	-	76	53.614	ENSMODG00000022797	-	83	53.614
ENSMODG00000003841	-	80	51.149	ENSMODG00000003340	RAB1A	85	51.149
ENSMODG00000003841	-	61	35.338	ENSMODG00000016580	HRAS	68	36.552
ENSMODG00000003841	-	83	39.572	ENSMODG00000013269	RAB33A	77	39.572
ENSMODG00000003841	-	68	34.000	ENSMODG00000025248	-	85	35.185
ENSMODG00000003841	-	68	34.000	ENSMODG00000017458	KRAS	85	35.185
ENSMODG00000003841	-	72	31.013	ENSMODG00000018565	MRAS	81	33.529
ENSMODG00000003841	-	78	55.556	ENSMODG00000006121	RAB2B	79	55.556
ENSMODG00000003841	-	74	41.615	ENSMODG00000021443	RAB31	83	41.615
ENSMODG00000003841	-	70	31.410	ENSMODG00000019295	RAB34	56	31.410
ENSMODG00000003841	-	81	41.209	ENSMODG00000025362	-	87	41.209
ENSMODG00000003841	-	80	52.299	ENSMODG00000019649	RAB14	81	52.299
ENSMODG00000003841	-	72	43.949	ENSMODG00000016544	RAB22A	81	43.949
ENSMODG00000003841	-	74	47.531	ENSMODG00000008253	RAB18	79	47.531

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000003841	-	100	97.248	ENSAPOG00000023455	rab11bb	100	97.248	Acanthochromis_polyacanthus
ENSMODG00000003841	-	100	97.706	ENSACIG00000024376	-	100	97.706	Amphilophus_citrinellus
ENSMODG00000003841	-	100	84.862	ENSACIG00000019631	rab11bb	100	84.862	Amphilophus_citrinellus
ENSMODG00000003841	-	100	97.248	ENSAOCG00000018239	rab11bb	100	97.248	Amphiprion_ocellaris
ENSMODG00000003841	-	100	97.706	ENSAOCG00000018849	-	100	97.706	Amphiprion_ocellaris
ENSMODG00000003841	-	100	97.248	ENSAPEG00000016590	rab11bb	100	97.248	Amphiprion_percula
ENSMODG00000003841	-	100	97.248	ENSATEG00000023725	-	100	97.248	Anabas_testudineus
ENSMODG00000003841	-	100	97.248	ENSATEG00000017696	rab11bb	100	97.248	Anabas_testudineus
ENSMODG00000003841	-	96	99.043	ENSAPLG00000011046	-	96	99.043	Anas_platyrhynchos
ENSMODG00000003841	-	100	97.706	ENSACLG00000005446	-	100	97.706	Astatotilapia_calliptera
ENSMODG00000003841	-	100	97.248	ENSACLG00000007076	rab11bb	100	97.248	Astatotilapia_calliptera
ENSMODG00000003841	-	100	98.624	ENSAMXG00000042655	rab11bb	100	98.624	Astyanax_mexicanus
ENSMODG00000003841	-	100	97.706	ENSAMXG00000037623	-	100	97.706	Astyanax_mexicanus
ENSMODG00000003841	-	100	98.624	ENSBTAG00000002475	RAB11B	100	98.624	Bos_taurus
ENSMODG00000003841	-	96	96.651	ENSCHIG00000022426	-	93	96.651	Capra_hircus
ENSMODG00000003841	-	100	98.624	ENSCATG00000029188	-	100	98.624	Cercocebus_atys
ENSMODG00000003841	-	100	100.000	ENSCPBG00000017056	-	100	100.000	Chrysemys_picta_bellii
ENSMODG00000003841	-	100	97.248	ENSCSEG00000007239	-	100	97.248	Cynoglossus_semilaevis
ENSMODG00000003841	-	100	97.248	ENSCSEG00000012149	rab11bb	100	97.248	Cynoglossus_semilaevis
ENSMODG00000003841	-	100	95.413	ENSCVAG00000019751	-	100	95.413	Cyprinodon_variegatus
ENSMODG00000003841	-	100	97.248	ENSCVAG00000017021	-	100	97.248	Cyprinodon_variegatus
ENSMODG00000003841	-	100	96.789	ENSCVAG00000019718	-	100	96.789	Cyprinodon_variegatus
ENSMODG00000003841	-	100	98.165	ENSDARG00000090086	rab11bb	100	98.165	Danio_rerio
ENSMODG00000003841	-	99	96.313	ENSETEG00000000905	-	99	96.313	Echinops_telfairi
ENSMODG00000003841	-	99	94.884	ENSEASG00005003708	-	99	94.884	Equus_asinus_asinus
ENSMODG00000003841	-	99	94.884	ENSECAG00000000716	RAB11B	99	94.884	Equus_caballus
ENSMODG00000003841	-	100	96.789	ENSELUG00000020948	-	98	98.438	Esox_lucius
ENSMODG00000003841	-	100	96.789	ENSELUG00000000916	-	100	96.789	Esox_lucius
ENSMODG00000003841	-	100	97.248	ENSELUG00000021148	rab11bb	100	97.248	Esox_lucius
ENSMODG00000003841	-	100	100.000	ENSFALG00000011828	-	100	100.000	Ficedula_albicollis
ENSMODG00000003841	-	100	97.248	ENSFHEG00000022676	-	100	97.248	Fundulus_heteroclitus
ENSMODG00000003841	-	100	97.248	ENSFHEG00000018353	rab11bb	100	97.248	Fundulus_heteroclitus
ENSMODG00000003841	-	99	93.519	ENSGMOG00000009668	-	99	93.519	Gadus_morhua
ENSMODG00000003841	-	100	97.248	ENSGMOG00000009211	rab11bb	100	97.248	Gadus_morhua
ENSMODG00000003841	-	100	100.000	ENSGALG00000000613	RAB11B	100	100.000	Gallus_gallus
ENSMODG00000003841	-	100	97.248	ENSGAFG00000007102	rab11bb	100	97.248	Gambusia_affinis
ENSMODG00000003841	-	100	95.413	ENSGACG00000013297	-	99	95.413	Gasterosteus_aculeatus
ENSMODG00000003841	-	100	96.789	ENSGACG00000015479	rab11bb	100	96.789	Gasterosteus_aculeatus
ENSMODG00000003841	-	100	98.624	ENSGGOG00000014516	RAB11B	100	98.624	Gorilla_gorilla
ENSMODG00000003841	-	100	97.706	ENSHBUG00000009947	-	100	97.706	Haplochromis_burtoni
ENSMODG00000003841	-	100	97.248	ENSHBUG00000014777	rab11bb	100	97.248	Haplochromis_burtoni
ENSMODG00000003841	-	100	92.202	ENSHCOG00000000985	-	100	92.202	Hippocampus_comes
ENSMODG00000003841	-	100	95.413	ENSHCOG00000000954	-	100	95.413	Hippocampus_comes
ENSMODG00000003841	-	100	97.706	ENSHCOG00000002423	rab11bb	100	97.706	Hippocampus_comes
ENSMODG00000003841	-	100	98.165	ENSIPUG00000019927	rab11bb	100	98.165	Ictalurus_punctatus
ENSMODG00000003841	-	100	98.165	ENSIPUG00000025100	rab11b	100	98.165	Ictalurus_punctatus
ENSMODG00000003841	-	100	97.248	ENSKMAG00000009033	rab11bb	100	97.248	Kryptolebias_marmoratus
ENSMODG00000003841	-	100	97.706	ENSKMAG00000006170	-	100	97.706	Kryptolebias_marmoratus
ENSMODG00000003841	-	100	96.789	ENSLBEG00000015248	rab11bb	100	96.789	Labrus_bergylta
ENSMODG00000003841	-	100	97.248	ENSLBEG00000004172	-	100	97.248	Labrus_bergylta
ENSMODG00000003841	-	100	89.908	ENSLBEG00000005981	-	100	89.908	Labrus_bergylta
ENSMODG00000003841	-	100	100.000	ENSLACG00000016857	-	100	100.000	Latimeria_chalumnae
ENSMODG00000003841	-	100	98.624	ENSMFAG00000003654	RAB11B	100	98.624	Macaca_fascicularis
ENSMODG00000003841	-	100	98.624	ENSMLEG00000030601	-	100	98.624	Mandrillus_leucophaeus
ENSMODG00000003841	-	100	96.330	ENSMAMG00000018533	-	100	96.330	Mastacembelus_armatus
ENSMODG00000003841	-	100	96.789	ENSMAMG00000006378	rab11bb	100	96.789	Mastacembelus_armatus
ENSMODG00000003841	-	100	97.248	ENSMZEG00005003352	rab11bb	100	97.248	Maylandia_zebra
ENSMODG00000003841	-	100	97.706	ENSMZEG00005010975	-	100	97.706	Maylandia_zebra
ENSMODG00000003841	-	100	98.624	ENSMICG00000034065	-	100	98.624	Microcebus_murinus
ENSMODG00000003841	-	100	97.706	ENSMMOG00000001250	-	100	97.706	Mola_mola
ENSMODG00000003841	-	94	98.049	ENSMMOG00000007917	rab11bb	100	98.049	Mola_mola
ENSMODG00000003841	-	99	96.313	ENSMMOG00000001238	-	99	96.313	Mola_mola
ENSMODG00000003841	-	100	97.248	ENSMALG00000022187	rab11bb	100	97.248	Monopterus_albus
ENSMODG00000003841	-	94	89.372	ENSMLUG00000006677	-	100	89.372	Myotis_lucifugus
ENSMODG00000003841	-	100	97.706	ENSNBRG00000023885	-	100	97.706	Neolamprologus_brichardi
ENSMODG00000003841	-	100	97.248	ENSNBRG00000000372	rab11bb	100	97.248	Neolamprologus_brichardi
ENSMODG00000003841	-	100	100.000	ENSMEUG00000003686	-	100	100.000	Notamacropus_eugenii
ENSMODG00000003841	-	100	97.706	ENSONIG00000002544	-	100	97.706	Oreochromis_niloticus
ENSMODG00000003841	-	100	97.248	ENSONIG00000010435	rab11bb	100	97.248	Oreochromis_niloticus
ENSMODG00000003841	-	50	98.165	ENSOANG00000031567	-	78	98.165	Ornithorhynchus_anatinus
ENSMODG00000003841	-	99	95.853	ENSORLG00000015284	-	72	95.853	Oryzias_latipes
ENSMODG00000003841	-	100	96.789	ENSORLG00000013938	rab11bb	100	96.789	Oryzias_latipes
ENSMODG00000003841	-	99	95.853	ENSORLG00020020844	RAB11B	99	95.853	Oryzias_latipes_hni
ENSMODG00000003841	-	100	96.789	ENSORLG00020019393	rab11bb	100	96.789	Oryzias_latipes_hni
ENSMODG00000003841	-	99	95.853	ENSORLG00015016999	RAB11B	99	95.853	Oryzias_latipes_hsok
ENSMODG00000003841	-	100	96.789	ENSORLG00015020173	rab11bb	100	96.789	Oryzias_latipes_hsok
ENSMODG00000003841	-	100	96.789	ENSOMEG00000002562	-	100	96.789	Oryzias_melastigma
ENSMODG00000003841	-	100	97.248	ENSOMEG00000017806	-	100	97.248	Oryzias_melastigma
ENSMODG00000003841	-	100	98.624	ENSPPAG00000028589	-	100	98.624	Pan_paniscus
ENSMODG00000003841	-	100	98.624	ENSPTRG00000010422	RAB11B	100	98.624	Pan_troglodytes
ENSMODG00000003841	-	100	98.624	ENSPANG00000007765	-	100	98.624	Papio_anubis
ENSMODG00000003841	-	100	98.624	ENSPKIG00000011703	-	100	98.624	Paramormyrops_kingsleyae
ENSMODG00000003841	-	98	98.131	ENSPKIG00000001389	-	69	98.131	Paramormyrops_kingsleyae
ENSMODG00000003841	-	100	97.248	ENSPKIG00000011640	rab11bb	100	97.248	Paramormyrops_kingsleyae
ENSMODG00000003841	-	98	94.521	ENSPSIG00000010242	-	85	94.521	Pelodiscus_sinensis
ENSMODG00000003841	-	100	97.248	ENSPMGG00000009435	rab11bb	100	97.248	Periophthalmus_magnuspinnatus
ENSMODG00000003841	-	100	95.872	ENSPMGG00000014333	-	100	95.872	Periophthalmus_magnuspinnatus
ENSMODG00000003841	-	99	93.548	ENSPMGG00000014336	-	99	93.548	Periophthalmus_magnuspinnatus
ENSMODG00000003841	-	97	97.642	ENSPCIG00000020371	-	99	97.642	Phascolarctos_cinereus
ENSMODG00000003841	-	100	97.248	ENSPFOG00000024114	-	100	97.248	Poecilia_formosa
ENSMODG00000003841	-	100	97.706	ENSPFOG00000006224	-	100	97.706	Poecilia_formosa
ENSMODG00000003841	-	100	97.248	ENSPLAG00000001598	rab11bb	100	97.248	Poecilia_latipinna
ENSMODG00000003841	-	100	97.706	ENSPLAG00000014207	-	100	97.706	Poecilia_latipinna
ENSMODG00000003841	-	100	97.706	ENSPMEG00000007842	-	100	97.706	Poecilia_mexicana
ENSMODG00000003841	-	100	97.248	ENSPMEG00000012389	rab11bb	100	97.248	Poecilia_mexicana
ENSMODG00000003841	-	100	97.248	ENSPREG00000014269	rab11bb	100	97.248	Poecilia_reticulata
ENSMODG00000003841	-	100	97.248	ENSPREG00000006336	-	100	97.248	Poecilia_reticulata
ENSMODG00000003841	-	100	97.248	ENSPNYG00000004098	rab11bb	100	97.248	Pundamilia_nyererei
ENSMODG00000003841	-	100	97.706	ENSPNYG00000019611	-	100	97.706	Pundamilia_nyererei
ENSMODG00000003841	-	100	98.624	ENSRROG00000037812	-	100	98.624	Rhinopithecus_roxellana
ENSMODG00000003841	-	97	98.113	ENSSHAG00000006816	-	97	98.113	Sarcophilus_harrisii
ENSMODG00000003841	-	100	98.624	ENSSFOG00015009042	rab11bb	100	98.624	Scleropages_formosus
ENSMODG00000003841	-	100	73.394	ENSSFOG00015006245	-	100	73.394	Scleropages_formosus
ENSMODG00000003841	-	100	96.789	ENSSMAG00000004922	rab11bb	100	96.789	Scophthalmus_maximus
ENSMODG00000003841	-	100	94.037	ENSSMAG00000018613	-	100	94.037	Scophthalmus_maximus
ENSMODG00000003841	-	100	97.706	ENSSDUG00000002934	-	100	97.706	Seriola_dumerili
ENSMODG00000003841	-	100	97.248	ENSSDUG00000013558	rab11bb	100	97.248	Seriola_dumerili
ENSMODG00000003841	-	100	97.706	ENSSLDG00000005275	-	100	97.706	Seriola_lalandi_dorsalis
ENSMODG00000003841	-	100	97.248	ENSSLDG00000020676	rab11bb	100	97.248	Seriola_lalandi_dorsalis
ENSMODG00000003841	-	100	99.541	ENSSPUG00000002243	-	100	99.541	Sphenodon_punctatus
ENSMODG00000003841	-	100	97.248	ENSSPAG00000011419	rab11bb	100	97.248	Stegastes_partitus
ENSMODG00000003841	-	100	97.706	ENSSPAG00000014559	-	100	97.706	Stegastes_partitus
ENSMODG00000003841	-	100	100.000	ENSTGUG00000000084	-	100	100.000	Taeniopygia_guttata
ENSMODG00000003841	-	99	95.392	ENSTRUG00000021614	-	99	95.392	Takifugu_rubripes
ENSMODG00000003841	-	99	97.685	ENSTRUG00000021619	-	100	97.685	Takifugu_rubripes
ENSMODG00000003841	-	100	97.248	ENSTRUG00000022029	rab11bb	100	97.248	Takifugu_rubripes
ENSMODG00000003841	-	100	96.330	ENSTNIG00000011081	rab11bb	100	96.330	Tetraodon_nigroviridis
ENSMODG00000003841	-	93	96.059	ENSTNIG00000002003	-	100	96.059	Tetraodon_nigroviridis
ENSMODG00000003841	-	99	97.685	ENSTNIG00000013182	-	100	97.685	Tetraodon_nigroviridis
ENSMODG00000003841	-	99	94.931	ENSTNIG00000013184	-	99	94.931	Tetraodon_nigroviridis
ENSMODG00000003841	-	94	98.537	ENSUAMG00000006639	-	99	98.537	Ursus_americanus
ENSMODG00000003841	-	100	98.630	ENSXETG00000025484	rab11b.1	99	98.630	Xenopus_tropicalis
ENSMODG00000003841	-	100	97.248	ENSXCOG00000008042	-	100	97.248	Xiphophorus_couchianus
ENSMODG00000003841	-	100	97.706	ENSXCOG00000009190	-	100	97.706	Xiphophorus_couchianus
ENSMODG00000003841	-	100	97.248	ENSXMAG00000011926	rab11bb	100	97.248	Xiphophorus_maculatus
ENSMODG00000003841	-	100	97.248	ENSXMAG00000024840	-	100	97.248	Xiphophorus_maculatus