EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000003850 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 1561 bases
Position: chrX:55424314-55425874
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000027604	RRM_5	PF13893.6	7.5e-13	1	2
ENSMODP00000027604	RRM_5	PF13893.6	7.5e-13	2	2
ENSMODP00000004717	RRM_5	PF13893.6	1e-11	1	1
ENSMODP00000004717	RRM_1	PF00076.22	4.5e-60	1	3
ENSMODP00000004717	RRM_1	PF00076.22	4.5e-60	2	3
ENSMODP00000004717	RRM_1	PF00076.22	4.5e-60	3	3
ENSMODP00000027604	RRM_1	PF00076.22	6.7e-60	1	3
ENSMODP00000027604	RRM_1	PF00076.22	6.7e-60	2	3
ENSMODP00000027604	RRM_1	PF00076.22	6.7e-60	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000029143	-	1086	-	ENSMODP00000027604	361 (aa)	-	F6Q365
ENSMODT00000004817	-	999	-	ENSMODP00000004717	332 (aa)	-	F7EBL5

Gene Model

Click here to download ENSMODG00000003850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000003850's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000003850	-	86	32.579	ENSMODG00000015125	RBMS3	56	32.579
ENSMODG00000003850	-	76	57.196	ENSMODG00000001300	-	97	55.396
ENSMODG00000003850	-	86	36.628	ENSMODG00000005250	RBMS1	55	35.204
ENSMODG00000003850	-	92	30.159	ENSMODG00000013156	-	59	30.159
ENSMODG00000003850	-	87	33.696	ENSMODG00000016763	CELF2	60	34.951
ENSMODG00000003850	-	83	38.095	ENSMODG00000001784	-	54	38.095
ENSMODG00000003850	-	95	57.622	ENSMODG00000005041	ELAVL1	90	53.951
ENSMODG00000003850	-	76	37.037	ENSMODG00000019913	CELF1	53	37.037
ENSMODG00000003850	-	95	62.236	ENSMODG00000006653	ELAVL3	86	62.236
ENSMODG00000003850	-	76	42.857	ENSMODG00000019151	-	52	42.857
ENSMODG00000003850	-	100	63.248	ENSMODG00000003936	ELAVL2	99	58.656

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000003850	-	100	64.000	ENSG00000162374	ELAVL4	96	64.000	Homo_sapiens
ENSMODG00000003850	-	99	64.095	ENSAPOG00000020329	elavl4	94	62.117	Acanthochromis_polyacanthus
ENSMODG00000003850	-	100	62.088	ENSAMEG00000017455	ELAVL4	95	62.088	Ailuropoda_melanoleuca
ENSMODG00000003850	-	99	63.689	ENSACIG00000008793	elavl4	99	61.838	Amphilophus_citrinellus
ENSMODG00000003850	-	51	60.920	ENSAOCG00000022907	elavl4	89	60.920	Amphiprion_ocellaris
ENSMODG00000003850	-	51	58.491	ENSAOCG00000022503	elavl4	66	54.237	Amphiprion_ocellaris
ENSMODG00000003850	-	99	63.689	ENSAPEG00000022826	elavl4	92	62.117	Amphiprion_percula
ENSMODG00000003850	-	99	63.689	ENSATEG00000006136	elavl4	97	61.838	Anabas_testudineus
ENSMODG00000003850	-	100	61.944	ENSACAG00000004527	ELAVL4	96	61.035	Anolis_carolinensis
ENSMODG00000003850	-	100	64.412	ENSANAG00000030598	ELAVL4	96	64.000	Aotus_nancymaae
ENSMODG00000003850	-	99	63.529	ENSACLG00000002786	elavl4	94	61.326	Astatotilapia_calliptera
ENSMODG00000003850	-	99	63.081	ENSAMXG00000000687	elavl4	98	60.590	Astyanax_mexicanus
ENSMODG00000003850	-	100	64.412	ENSBTAG00000021046	ELAVL4	97	64.000	Bos_taurus
ENSMODG00000003850	-	93	53.704	WBGene00001368	exc-7	94	53.704	Caenorhabditis_elegans
ENSMODG00000003850	-	100	64.412	ENSCJAG00000013725	ELAVL4	96	64.000	Callithrix_jacchus
ENSMODG00000003850	-	100	64.000	ENSCAFG00000003927	ELAVL4	96	64.000	Canis_familiaris
ENSMODG00000003850	-	100	64.412	ENSCAFG00020013581	ELAVL4	96	64.412	Canis_lupus_dingo
ENSMODG00000003850	-	100	64.000	ENSCHIG00000002038	ELAVL4	98	63.768	Capra_hircus
ENSMODG00000003850	-	94	64.919	ENSTSYG00000004130	ELAVL4	99	64.400	Carlito_syrichta
ENSMODG00000003850	-	76	71.186	ENSCAPG00000005993	ELAVL4	100	47.279	Cavia_aperea
ENSMODG00000003850	-	100	49.249	ENSCAPG00000011942	-	100	48.105	Cavia_aperea
ENSMODG00000003850	-	99	48.657	ENSCPOG00000022816	-	100	47.688	Cavia_porcellus
ENSMODG00000003850	-	100	64.412	ENSCPOG00000002044	-	96	64.000	Cavia_porcellus
ENSMODG00000003850	-	100	64.412	ENSCCAG00000024797	ELAVL4	96	64.000	Cebus_capucinus
ENSMODG00000003850	-	100	64.412	ENSCATG00000029867	ELAVL4	98	62.088	Cercocebus_atys
ENSMODG00000003850	-	100	64.000	ENSCLAG00000005476	ELAVL4	96	64.000	Chinchilla_lanigera
ENSMODG00000003850	-	100	64.000	ENSCSAG00000001257	ELAVL4	96	64.000	Chlorocebus_sabaeus
ENSMODG00000003850	-	100	62.259	ENSCHOG00000002464	ELAVL4	95	62.259	Choloepus_hoffmanni
ENSMODG00000003850	-	100	64.412	ENSCPBG00000010017	ELAVL4	98	62.465	Chrysemys_picta_bellii
ENSMODG00000003850	-	98	37.500	ENSCING00000009052	-	99	39.298	Ciona_intestinalis
ENSMODG00000003850	-	100	64.412	ENSCANG00000043683	ELAVL4	97	64.412	Colobus_angolensis_palliatus
ENSMODG00000003850	-	100	64.412	ENSCGRG00001020348	Elavl4	96	64.000	Cricetulus_griseus_chok1gshd
ENSMODG00000003850	-	100	64.412	ENSCGRG00000009162	Elavl4	96	64.412	Cricetulus_griseus_crigri
ENSMODG00000003850	-	99	64.095	ENSCSEG00000020141	elavl4	91	63.689	Cynoglossus_semilaevis
ENSMODG00000003850	-	99	63.824	ENSCVAG00000019080	elavl4	93	63.824	Cyprinodon_variegatus
ENSMODG00000003850	-	99	64.307	ENSDARG00000045639	elavl4	88	62.570	Danio_rerio
ENSMODG00000003850	-	100	64.000	ENSDNOG00000033502	ELAVL4	94	64.000	Dasypus_novemcinctus
ENSMODG00000003850	-	100	64.412	ENSDORG00000012729	Elavl4	96	64.000	Dipodomys_ordii
ENSMODG00000003850	-	100	57.967	ENSETEG00000013779	ELAVL4	97	57.967	Echinops_telfairi
ENSMODG00000003850	-	100	64.000	ENSEASG00005010728	ELAVL4	98	62.185	Equus_asinus_asinus
ENSMODG00000003850	-	100	64.412	ENSECAG00000022284	ELAVL4	98	62.185	Equus_caballus
ENSMODG00000003850	-	100	61.538	ENSEEUG00000008766	ELAVL4	95	62.088	Erinaceus_europaeus
ENSMODG00000003850	-	99	64.392	ENSELUG00000008025	elavl4	87	64.392	Esox_lucius
ENSMODG00000003850	-	100	64.412	ENSFCAG00000010438	ELAVL4	96	64.000	Felis_catus
ENSMODG00000003850	-	100	64.000	ENSFALG00000005331	ELAVL4	99	61.351	Ficedula_albicollis
ENSMODG00000003850	-	100	64.412	ENSFDAG00000014507	ELAVL4	96	64.412	Fukomys_damarensis
ENSMODG00000003850	-	99	63.977	ENSFHEG00000004530	elavl4	97	59.326	Fundulus_heteroclitus
ENSMODG00000003850	-	99	63.977	ENSGMOG00000006515	elavl4	99	62.291	Gadus_morhua
ENSMODG00000003850	-	100	64.412	ENSGALG00000010533	ELAVL4	98	62.465	Gallus_gallus
ENSMODG00000003850	-	84	60.606	ENSGAFG00000015956	elavl4	82	58.576	Gambusia_affinis
ENSMODG00000003850	-	99	63.689	ENSGACG00000011152	elavl4	99	62.117	Gasterosteus_aculeatus
ENSMODG00000003850	-	100	64.000	ENSGAGG00000018269	ELAVL4	97	61.264	Gopherus_agassizii
ENSMODG00000003850	-	100	64.412	ENSGGOG00000000634	ELAVL4	98	62.088	Gorilla_gorilla
ENSMODG00000003850	-	99	64.095	ENSHBUG00000009691	elavl4	94	61.838	Haplochromis_burtoni
ENSMODG00000003850	-	100	64.412	ENSHGLG00000000485	ELAVL4	98	62.088	Heterocephalus_glaber_female
ENSMODG00000003850	-	100	64.412	ENSHGLG00100002567	ELAVL4	96	64.412	Heterocephalus_glaber_male
ENSMODG00000003850	-	99	63.689	ENSHCOG00000002490	elavl4	99	61.838	Hippocampus_comes
ENSMODG00000003850	-	99	63.081	ENSIPUG00000001381	elavl4	90	62.712	Ictalurus_punctatus
ENSMODG00000003850	-	100	64.412	ENSSTOG00000027271	ELAVL4	96	64.000	Ictidomys_tridecemlineatus
ENSMODG00000003850	-	100	64.412	ENSJJAG00000023099	Elavl4	98	62.363	Jaculus_jaculus
ENSMODG00000003850	-	99	63.529	ENSKMAG00000022289	elavl4	91	61.326	Kryptolebias_marmoratus
ENSMODG00000003850	-	99	63.143	ENSLBEG00000007096	elavl4	91	58.839	Labrus_bergylta
ENSMODG00000003850	-	100	64.000	ENSLACG00000008316	ELAVL4	97	62.465	Latimeria_chalumnae
ENSMODG00000003850	-	99	64.265	ENSLOCG00000009363	elavl4	87	63.456	Lepisosteus_oculatus
ENSMODG00000003850	-	100	62.088	ENSLAFG00000001087	ELAVL4	100	65.823	Loxodonta_africana
ENSMODG00000003850	-	100	64.412	ENSMFAG00000039866	ELAVL4	98	62.088	Macaca_fascicularis
ENSMODG00000003850	-	100	64.412	ENSMMUG00000021933	ELAVL4	97	63.768	Macaca_mulatta
ENSMODG00000003850	-	100	64.412	ENSMNEG00000035576	ELAVL4	98	62.185	Macaca_nemestrina
ENSMODG00000003850	-	100	64.412	ENSMLEG00000028616	ELAVL4	96	64.000	Mandrillus_leucophaeus
ENSMODG00000003850	-	99	63.689	ENSMAMG00000004000	elavl4	98	61.838	Mastacembelus_armatus
ENSMODG00000003850	-	99	64.095	ENSMZEG00005010690	elavl4	90	61.838	Maylandia_zebra
ENSMODG00000003850	-	100	63.818	ENSMGAG00000010928	ELAVL4	96	62.291	Meleagris_gallopavo
ENSMODG00000003850	-	100	64.412	ENSMAUG00000021566	Elavl4	96	64.000	Mesocricetus_auratus
ENSMODG00000003850	-	100	64.412	ENSMICG00000003286	ELAVL4	97	64.000	Microcebus_murinus
ENSMODG00000003850	-	100	64.412	ENSMOCG00000010309	Elavl4	98	62.088	Microtus_ochrogaster
ENSMODG00000003850	-	99	63.689	ENSMMOG00000020264	elavl4	93	61.838	Mola_mola
ENSMODG00000003850	-	99	64.688	ENSMALG00000016432	elavl4	98	60.000	Monopterus_albus
ENSMODG00000003850	-	100	64.412	MGP_CAROLIEiJ_G0026289	Elavl4	96	64.000	Mus_caroli
ENSMODG00000003850	-	100	64.412	ENSMUSG00000028546	Elavl4	96	64.000	Mus_musculus
ENSMODG00000003850	-	100	64.412	MGP_PahariEiJ_G0028622	Elavl4	96	64.000	Mus_pahari
ENSMODG00000003850	-	100	64.412	MGP_SPRETEiJ_G0027258	Elavl4	96	64.000	Mus_spretus
ENSMODG00000003850	-	100	62.088	ENSMPUG00000007192	ELAVL4	98	60.108	Mustela_putorius_furo
ENSMODG00000003850	-	100	64.000	ENSMLUG00000006226	ELAVL4	95	64.000	Myotis_lucifugus
ENSMODG00000003850	-	100	64.118	ENSNGAG00000023123	Elavl4	98	61.905	Nannospalax_galili
ENSMODG00000003850	-	100	64.412	ENSNLEG00000016303	ELAVL4	97	64.412	Nomascus_leucogenys
ENSMODG00000003850	-	100	62.259	ENSMEUG00000007145	ELAVL4	97	62.259	Notamacropus_eugenii
ENSMODG00000003850	-	100	62.088	ENSOPRG00000015300	ELAVL4	95	62.088	Ochotona_princeps
ENSMODG00000003850	-	100	64.412	ENSODEG00000006770	ELAVL4	96	64.412	Octodon_degus
ENSMODG00000003850	-	99	63.689	ENSONIG00000002360	elavl4	96	61.838	Oreochromis_niloticus
ENSMODG00000003850	-	92	65.801	ENSOANG00000007377	ELAVL4	100	65.801	Ornithorhynchus_anatinus
ENSMODG00000003850	-	100	64.000	ENSOCUG00000016262	ELAVL4	90	64.000	Oryctolagus_cuniculus
ENSMODG00000003850	-	99	63.689	ENSORLG00000028487	elavl4	88	62.963	Oryzias_latipes
ENSMODG00000003850	-	99	64.095	ENSORLG00020014277	elavl4	87	63.689	Oryzias_latipes_hni
ENSMODG00000003850	-	99	64.095	ENSORLG00015010143	elavl4	87	63.689	Oryzias_latipes_hsok
ENSMODG00000003850	-	99	63.689	ENSOMEG00000009988	elavl4	91	61.326	Oryzias_melastigma
ENSMODG00000003850	-	100	64.000	ENSOGAG00000016990	ELAVL4	95	64.000	Otolemur_garnettii
ENSMODG00000003850	-	100	64.000	ENSOARG00000004264	ELAVL4	94	64.000	Ovis_aries
ENSMODG00000003850	-	100	64.412	ENSPPAG00000042402	ELAVL4	98	62.088	Pan_paniscus
ENSMODG00000003850	-	100	64.000	ENSPPRG00000002764	ELAVL4	96	64.000	Panthera_pardus
ENSMODG00000003850	-	100	64.000	ENSPTIG00000016727	ELAVL4	96	64.000	Panthera_tigris_altaica
ENSMODG00000003850	-	100	64.412	ENSPTRG00000000723	ELAVL4	97	64.412	Pan_troglodytes
ENSMODG00000003850	-	100	64.412	ENSPANG00000017754	ELAVL4	96	64.000	Papio_anubis
ENSMODG00000003850	-	99	64.392	ENSPKIG00000006999	elavl4	95	62.994	Paramormyrops_kingsleyae
ENSMODG00000003850	-	100	64.000	ENSPSIG00000008545	ELAVL4	98	62.745	Pelodiscus_sinensis
ENSMODG00000003850	-	99	63.689	ENSPMGG00000022175	elavl4	93	64.809	Periophthalmus_magnuspinnatus
ENSMODG00000003850	-	95	61.243	ENSPEMG00000021058	Elavl3	91	61.976	Peromyscus_maniculatus_bairdii
ENSMODG00000003850	-	94	70.288	ENSPCIG00000017116	-	98	68.060	Phascolarctos_cinereus
ENSMODG00000003850	-	99	63.689	ENSPFOG00000004811	elavl4	100	63.551	Poecilia_formosa
ENSMODG00000003850	-	99	63.689	ENSPLAG00000008085	elavl4	97	61.838	Poecilia_latipinna
ENSMODG00000003850	-	99	64.095	ENSPMEG00000015619	elavl4	88	61.838	Poecilia_mexicana
ENSMODG00000003850	-	99	64.095	ENSPREG00000018937	elavl4	98	60.000	Poecilia_reticulata
ENSMODG00000003850	-	100	64.000	ENSPPYG00000001367	ELAVL4	94	64.000	Pongo_abelii
ENSMODG00000003850	-	100	62.088	ENSPCAG00000008215	ELAVL4	95	62.088	Procavia_capensis
ENSMODG00000003850	-	100	64.412	ENSPCOG00000024957	ELAVL4	99	61.345	Propithecus_coquereli
ENSMODG00000003850	-	87	80.303	ENSPVAG00000003632	ELAVL4	82	80.303	Pteropus_vampyrus
ENSMODG00000003850	-	99	63.689	ENSPNYG00000021720	elavl4	98	61.838	Pundamilia_nyererei
ENSMODG00000003850	-	99	63.081	ENSPNAG00000017169	elavl4	98	60.590	Pygocentrus_nattereri
ENSMODG00000003850	-	100	62.088	ENSRNOG00000023601	Elavl4	95	62.088	Rattus_norvegicus
ENSMODG00000003850	-	100	64.412	ENSRBIG00000043810	ELAVL4	96	64.000	Rhinopithecus_bieti
ENSMODG00000003850	-	100	64.412	ENSRROG00000044786	ELAVL4	97	64.412	Rhinopithecus_roxellana
ENSMODG00000003850	-	100	64.412	ENSSBOG00000022965	ELAVL4	97	64.000	Saimiri_boliviensis_boliviensis
ENSMODG00000003850	-	93	72.981	ENSSHAG00000001657	-	100	69.553	Sarcophilus_harrisii
ENSMODG00000003850	-	100	64.000	ENSSHAG00000013832	-	98	62.465	Sarcophilus_harrisii
ENSMODG00000003850	-	99	64.392	ENSSFOG00015015838	elavl4	98	60.590	Scleropages_formosus
ENSMODG00000003850	-	99	63.689	ENSSMAG00000006881	elavl4	98	60.053	Scophthalmus_maximus
ENSMODG00000003850	-	99	63.689	ENSSDUG00000000045	elavl4	90	61.838	Seriola_dumerili
ENSMODG00000003850	-	99	64.095	ENSSLDG00000005260	elavl4	90	61.838	Seriola_lalandi_dorsalis
ENSMODG00000003850	-	100	62.088	ENSSARG00000010733	ELAVL4	97	62.088	Sorex_araneus
ENSMODG00000003850	-	100	64.000	ENSSPUG00000011636	ELAVL4	99	62.465	Sphenodon_punctatus
ENSMODG00000003850	-	99	63.689	ENSSPAG00000018867	elavl4	95	61.838	Stegastes_partitus
ENSMODG00000003850	-	100	64.000	ENSSSCG00000037291	ELAVL4	95	64.000	Sus_scrofa
ENSMODG00000003850	-	100	64.000	ENSTGUG00000008597	ELAVL4	98	62.465	Taeniopygia_guttata
ENSMODG00000003850	-	99	63.689	ENSTRUG00000000523	elavl4	98	61.838	Takifugu_rubripes
ENSMODG00000003850	-	99	63.689	ENSTNIG00000015485	elavl4	97	61.838	Tetraodon_nigroviridis
ENSMODG00000003850	-	90	67.763	ENSTBEG00000011730	ELAVL4	74	67.763	Tupaia_belangeri
ENSMODG00000003850	-	86	62.376	ENSTTRG00000012441	ELAVL4	61	62.376	Tursiops_truncatus
ENSMODG00000003850	-	100	64.412	ENSUAMG00000013026	ELAVL4	96	64.000	Ursus_americanus
ENSMODG00000003850	-	100	64.412	ENSUMAG00000023149	ELAVL4	96	64.000	Ursus_maritimus
ENSMODG00000003850	-	100	62.088	ENSVPAG00000011606	ELAVL4	95	62.088	Vicugna_pacos
ENSMODG00000003850	-	100	64.412	ENSVVUG00000006175	ELAVL4	96	64.000	Vulpes_vulpes
ENSMODG00000003850	-	100	59.103	ENSXETG00000008680	elavl4	98	57.254	Xenopus_tropicalis
ENSMODG00000003850	-	99	64.095	ENSXMAG00000025683	elavl4	98	60.000	Xiphophorus_maculatus