EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000003873 (Gene tree)
Gene ID: 100026268
Gene Symbol: -
Alias: ePABP2
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 4620 bases
Position: chr1:696115957-696120576
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000004743	RRM_1	PF00076.22	7.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000004844	-	813	-	ENSMODP00000004743	270 (aa)	-	F7DTF3

Gene Model

Click here to download ENSMODG00000003873's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03015	mRNA surveillance pathway	KEGG
mdo05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000003873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000003873	-	71	51.795	ENSMODG00000004535	-	61	52.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000003873	-	100	52.128	ENSG00000205022	PABPN1L	100	53.546	Homo_sapiens
ENSMODG00000003873	-	57	54.902	ENSATEG00000011646	PABPN1L	59	55.484	Anabas_testudineus
ENSMODG00000003873	-	73	57.143	ENSACAG00000013250	PABPN1L	98	57.143	Anolis_carolinensis
ENSMODG00000003873	-	100	52.143	ENSANAG00000038178	PABPN1L	100	52.857	Aotus_nancymaae
ENSMODG00000003873	-	56	54.667	ENSAMXG00000010873	PABPN1L	67	51.913	Astyanax_mexicanus
ENSMODG00000003873	-	87	47.541	ENSBTAG00000023752	-	100	48.227	Bos_taurus
ENSMODG00000003873	-	100	51.071	ENSCJAG00000045284	PABPN1L	100	51.786	Callithrix_jacchus
ENSMODG00000003873	-	100	47.312	ENSCHIG00000013987	PABPN1L	100	47.312	Capra_hircus
ENSMODG00000003873	-	94	49.077	ENSCAPG00000007240	PABPN1L	100	49.077	Cavia_aperea
ENSMODG00000003873	-	100	49.819	ENSCPOG00000025951	PABPN1L	100	51.439	Cavia_porcellus
ENSMODG00000003873	-	100	51.071	ENSCCAG00000027631	PABPN1L	100	52.857	Cebus_capucinus
ENSMODG00000003873	-	100	51.971	ENSCATG00000031060	PABPN1L	100	54.839	Cercocebus_atys
ENSMODG00000003873	-	100	49.275	ENSCLAG00000000704	PABPN1L	100	51.812	Chinchilla_lanigera
ENSMODG00000003873	-	100	54.110	ENSCSAG00000002881	PABPN1L	100	54.110	Chlorocebus_sabaeus
ENSMODG00000003873	-	73	60.606	ENSCPBG00000023441	PABPN1L	60	60.606	Chrysemys_picta_bellii
ENSMODG00000003873	-	100	52.143	ENSCANG00000039336	PABPN1L	100	52.143	Colobus_angolensis_palliatus
ENSMODG00000003873	-	100	55.556	ENSCGRG00001013211	Pabpn1l	100	55.556	Cricetulus_griseus_chok1gshd
ENSMODG00000003873	-	100	55.556	ENSCGRG00000015868	Pabpn1l	100	55.556	Cricetulus_griseus_crigri
ENSMODG00000003873	-	61	49.701	ENSCSEG00000001142	pabpn1l	72	48.223	Cynoglossus_semilaevis
ENSMODG00000003873	-	100	45.936	ENSDNOG00000034677	PABPN1L	100	45.230	Dasypus_novemcinctus
ENSMODG00000003873	-	100	52.688	ENSEASG00005000777	PABPN1L	100	51.799	Equus_asinus_asinus
ENSMODG00000003873	-	100	53.047	ENSECAG00000000378	PABPN1L	100	52.158	Equus_caballus
ENSMODG00000003873	-	100	49.815	ENSEEUG00000004747	PABPN1L	100	49.446	Erinaceus_europaeus
ENSMODG00000003873	-	56	57.616	ENSELUG00000018385	PABPN1L	62	57.396	Esox_lucius
ENSMODG00000003873	-	100	50.538	ENSFCAG00000010465	PABPN1L	100	51.254	Felis_catus
ENSMODG00000003873	-	73	55.612	ENSFALG00000003319	PABPN1L	77	55.612	Ficedula_albicollis
ENSMODG00000003873	-	100	50.725	ENSFDAG00000021067	PABPN1L	100	52.899	Fukomys_damarensis
ENSMODG00000003873	-	64	58.621	ENSGALG00000006242	PABPN1L	99	58.621	Gallus_gallus
ENSMODG00000003873	-	61	50.562	ENSGACG00000015428	PABPN1L	70	51.515	Gasterosteus_aculeatus
ENSMODG00000003873	-	68	59.783	ENSGAGG00000010613	PABPN1L	60	59.783	Gopherus_agassizii
ENSMODG00000003873	-	100	52.688	ENSGGOG00000012670	PABPN1L	100	54.122	Gorilla_gorilla
ENSMODG00000003873	-	94	50.190	ENSHGLG00000014207	PABPN1L	99	50.000	Heterocephalus_glaber_female
ENSMODG00000003873	-	94	50.190	ENSHGLG00100005230	PABPN1L	99	50.000	Heterocephalus_glaber_male
ENSMODG00000003873	-	61	48.193	ENSHCOG00000004151	PABPN1L	74	49.756	Hippocampus_comes
ENSMODG00000003873	-	100	48.763	ENSSTOG00000020814	PABPN1L	100	49.470	Ictidomys_tridecemlineatus
ENSMODG00000003873	-	100	52.330	ENSJJAG00000006433	Pabpn1l	100	52.330	Jaculus_jaculus
ENSMODG00000003873	-	73	55.330	ENSLAFG00000025902	-	77	55.330	Loxodonta_africana
ENSMODG00000003873	-	100	52.330	ENSMFAG00000002924	PABPN1L	100	55.197	Macaca_fascicularis
ENSMODG00000003873	-	100	51.971	ENSMMUG00000012438	PABPN1L	100	54.839	Macaca_mulatta
ENSMODG00000003873	-	100	52.330	ENSMNEG00000044808	PABPN1L	100	55.197	Macaca_nemestrina
ENSMODG00000003873	-	100	51.971	ENSMLEG00000032667	PABPN1L	100	54.839	Mandrillus_leucophaeus
ENSMODG00000003873	-	100	56.410	ENSMAUG00000014032	Pabpn1l	100	56.410	Mesocricetus_auratus
ENSMODG00000003873	-	100	53.381	ENSMICG00000028179	PABPN1L	100	53.737	Microcebus_murinus
ENSMODG00000003873	-	100	53.091	ENSMOCG00000007955	Pabpn1l	100	53.091	Microtus_ochrogaster
ENSMODG00000003873	-	99	52.920	MGP_CAROLIEiJ_G0031670	Pabpn1l	99	52.364	Mus_caroli
ENSMODG00000003873	-	99	53.285	ENSMUSG00000069867	Pabpn1l	99	52.364	Mus_musculus
ENSMODG00000003873	-	99	52.190	MGP_PahariEiJ_G0023268	Pabpn1l	99	51.273	Mus_pahari
ENSMODG00000003873	-	99	52.190	MGP_SPRETEiJ_G0032788	Pabpn1l	99	51.273	Mus_spretus
ENSMODG00000003873	-	75	44.550	ENSMLUG00000003228	PABPN1L	75	44.860	Myotis_lucifugus
ENSMODG00000003873	-	100	53.763	ENSNGAG00000023992	Pabpn1l	100	53.763	Nannospalax_galili
ENSMODG00000003873	-	100	52.347	ENSOPRG00000005597	PABPN1L	100	51.625	Ochotona_princeps
ENSMODG00000003873	-	100	47.782	ENSODEG00000004649	PABPN1L	100	46.758	Octodon_degus
ENSMODG00000003873	-	100	57.037	ENSOANG00000013901	PABPN1L	100	57.196	Ornithorhynchus_anatinus
ENSMODG00000003873	-	74	46.305	ENSORLG00000026560	PABPN1L	66	50.276	Oryzias_latipes
ENSMODG00000003873	-	66	50.276	ENSORLG00020015068	PABPN1L	66	50.276	Oryzias_latipes_hni
ENSMODG00000003873	-	74	46.305	ENSORLG00015000397	PABPN1L	66	50.276	Oryzias_latipes_hsok
ENSMODG00000003873	-	100	51.971	ENSOGAG00000000433	PABPN1L	100	51.971	Otolemur_garnettii
ENSMODG00000003873	-	87	46.097	ENSOARG00000013682	PABPN1L	100	46.906	Ovis_aries
ENSMODG00000003873	-	100	52.482	ENSPPAG00000028866	PABPN1L	100	53.546	Pan_paniscus
ENSMODG00000003873	-	100	50.896	ENSPPRG00000015106	PABPN1L	100	53.047	Panthera_pardus
ENSMODG00000003873	-	93	49.421	ENSPTIG00000015606	PABPN1L	100	49.421	Panthera_tigris_altaica
ENSMODG00000003873	-	100	52.482	ENSPTRG00000031120	PABPN1L	100	53.546	Pan_troglodytes
ENSMODG00000003873	-	100	51.971	ENSPANG00000026039	PABPN1L	100	54.839	Papio_anubis
ENSMODG00000003873	-	73	60.914	ENSPSIG00000003404	PABPN1L	100	60.406	Pelodiscus_sinensis
ENSMODG00000003873	-	100	57.353	ENSPEMG00000016624	Pabpn1l	100	57.143	Peromyscus_maniculatus_bairdii
ENSMODG00000003873	-	53	80.556	ENSPCIG00000007038	-	100	80.556	Phascolarctos_cinereus
ENSMODG00000003873	-	100	52.482	ENSPPYG00000007655	PABPN1L	100	53.546	Pongo_abelii
ENSMODG00000003873	-	100	51.429	ENSPCOG00000024077	PABPN1L	100	52.500	Propithecus_coquereli
ENSMODG00000003873	-	100	49.826	ENSPVAG00000002716	PABPN1L	100	52.265	Pteropus_vampyrus
ENSMODG00000003873	-	100	54.380	ENSRNOG00000029558	Pabpn1l	100	54.015	Rattus_norvegicus
ENSMODG00000003873	-	100	52.330	ENSRBIG00000030740	PABPN1L	100	55.197	Rhinopithecus_bieti
ENSMODG00000003873	-	100	53.405	ENSRROG00000032240	-	100	55.197	Rhinopithecus_roxellana
ENSMODG00000003873	-	99	51.799	ENSRROG00000035483	-	99	54.317	Rhinopithecus_roxellana
ENSMODG00000003873	-	100	51.429	ENSSBOG00000018410	PABPN1L	100	52.143	Saimiri_boliviensis_boliviensis
ENSMODG00000003873	-	100	72.822	ENSSHAG00000010001	-	100	72.822	Sarcophilus_harrisii
ENSMODG00000003873	-	84	43.860	ENSSARG00000005178	-	91	43.860	Sorex_araneus
ENSMODG00000003873	-	72	61.026	ENSSPUG00000007031	PABPN1L	86	60.500	Sphenodon_punctatus
ENSMODG00000003873	-	100	46.127	ENSSSCG00000036367	PABPN1L	100	52.500	Sus_scrofa
ENSMODG00000003873	-	61	48.810	ENSTRUG00000024725	PABPN1L	76	48.936	Takifugu_rubripes
ENSMODG00000003873	-	100	49.462	ENSTTRG00000004691	PABPN1L	100	51.056	Tursiops_truncatus
ENSMODG00000003873	-	61	53.488	ENSXETG00000011258	pabpn1l	95	50.917	Xenopus_tropicalis