EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000003979 (Gene tree)
Gene ID: 100032045
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 47976 bases
Position: chr1:384504288-384552263
Accession: 100032045
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000004891	Exo_endo_phos	PF03372.23	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000004995	CNOT6-201	7304	-	ENSMODP00000004891	557 (aa)	XP_001381153	F7F909

Gene Model

Click here to download ENSMODG00000003979's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000003979's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000003979	CNOT6	100	78.995	ENSMODG00000011744	CNOT6L	75	78.995

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000003979	CNOT6	100	95.871	ENSG00000113300	CNOT6	100	97.368	Homo_sapiens
ENSMODG00000003979	CNOT6	100	87.299	ENSAPOG00000009994	cnot6b	100	86.941	Acanthochromis_polyacanthus
ENSMODG00000003979	CNOT6	100	96.422	ENSAMEG00000000949	CNOT6	99	96.422	Ailuropoda_melanoleuca
ENSMODG00000003979	CNOT6	100	86.583	ENSACIG00000016566	cnot6b	100	86.225	Amphilophus_citrinellus
ENSMODG00000003979	CNOT6	100	87.299	ENSAOCG00000006893	cnot6b	100	86.941	Amphiprion_ocellaris
ENSMODG00000003979	CNOT6	100	87.299	ENSAPEG00000016949	cnot6b	100	86.941	Amphiprion_percula
ENSMODG00000003979	CNOT6	100	85.510	ENSATEG00000007862	cnot6b	100	85.152	Anabas_testudineus
ENSMODG00000003979	CNOT6	100	97.127	ENSAPLG00000012715	CNOT6	99	97.127	Anas_platyrhynchos
ENSMODG00000003979	CNOT6	100	94.434	ENSACAG00000016548	CNOT6	100	94.434	Anolis_carolinensis
ENSMODG00000003979	CNOT6	100	96.050	ENSANAG00000030436	CNOT6	96	96.050	Aotus_nancymaae
ENSMODG00000003979	CNOT6	100	85.510	ENSACLG00000008279	cnot6b	100	86.047	Astatotilapia_calliptera
ENSMODG00000003979	CNOT6	100	85.663	ENSAMXG00000034694	cnot6b	100	85.663	Astyanax_mexicanus
ENSMODG00000003979	CNOT6	100	87.276	ENSAMXG00000019140	cnot6a	100	87.276	Astyanax_mexicanus
ENSMODG00000003979	CNOT6	100	96.589	ENSBTAG00000017362	CNOT6	100	96.589	Bos_taurus
ENSMODG00000003979	CNOT6	100	95.871	ENSCJAG00000009795	CNOT6	100	95.871	Callithrix_jacchus
ENSMODG00000003979	CNOT6	100	96.589	ENSCAFG00000000464	CNOT6	100	96.589	Canis_familiaris
ENSMODG00000003979	CNOT6	100	96.589	ENSCAFG00020002441	CNOT6	100	96.589	Canis_lupus_dingo
ENSMODG00000003979	CNOT6	100	96.230	ENSCHIG00000019100	CNOT6	100	96.230	Capra_hircus
ENSMODG00000003979	CNOT6	100	94.434	ENSTSYG00000003982	CNOT6	100	94.434	Carlito_syrichta
ENSMODG00000003979	CNOT6	100	90.844	ENSCPOG00000035657	CNOT6	100	90.844	Cavia_porcellus
ENSMODG00000003979	CNOT6	100	91.382	ENSCCAG00000033670	CNOT6	100	91.382	Cebus_capucinus
ENSMODG00000003979	CNOT6	100	95.871	ENSCATG00000042014	CNOT6	100	95.871	Cercocebus_atys
ENSMODG00000003979	CNOT6	100	94.255	ENSCLAG00000010489	CNOT6	100	94.255	Chinchilla_lanigera
ENSMODG00000003979	CNOT6	100	95.871	ENSCSAG00000008165	CNOT6	100	95.871	Chlorocebus_sabaeus
ENSMODG00000003979	CNOT6	100	95.332	ENSCHOG00000009680	CNOT6	100	95.332	Choloepus_hoffmanni
ENSMODG00000003979	CNOT6	100	96.409	ENSCPBG00000008908	CNOT6	100	96.409	Chrysemys_picta_bellii
ENSMODG00000003979	CNOT6	100	96.050	ENSCANG00000026756	CNOT6	100	96.050	Colobus_angolensis_palliatus
ENSMODG00000003979	CNOT6	100	94.614	ENSCGRG00001011452	Cnot6	100	94.614	Cricetulus_griseus_chok1gshd
ENSMODG00000003979	CNOT6	100	92.460	ENSCGRG00000010407	Cnot6	100	92.460	Cricetulus_griseus_crigri
ENSMODG00000003979	CNOT6	100	86.762	ENSCSEG00000010939	cnot6b	100	86.404	Cynoglossus_semilaevis
ENSMODG00000003979	CNOT6	100	85.842	ENSCVAG00000010538	cnot6b	100	85.484	Cyprinodon_variegatus
ENSMODG00000003979	CNOT6	100	84.409	ENSDARG00000101072	cnot6b	100	84.409	Danio_rerio
ENSMODG00000003979	CNOT6	100	87.097	ENSDARG00000008255	cnot6a	100	87.097	Danio_rerio
ENSMODG00000003979	CNOT6	100	96.409	ENSDNOG00000041644	CNOT6	100	96.409	Dasypus_novemcinctus
ENSMODG00000003979	CNOT6	100	85.099	ENSDORG00000001708	Cnot6	100	85.099	Dipodomys_ordii
ENSMODG00000003979	CNOT6	100	76.923	ENSETEG00000006975	CNOT6	100	76.923	Echinops_telfairi
ENSMODG00000003979	CNOT6	90	90.600	ENSEASG00005012957	-	99	90.600	Equus_asinus_asinus
ENSMODG00000003979	CNOT6	100	95.691	ENSEASG00005012794	-	100	95.691	Equus_asinus_asinus
ENSMODG00000003979	CNOT6	100	90.305	ENSECAG00000012704	-	99	90.305	Equus_caballus
ENSMODG00000003979	CNOT6	100	96.409	ENSECAG00000019325	CNOT6	100	96.409	Equus_caballus
ENSMODG00000003979	CNOT6	100	95.153	ENSEEUG00000015382	CNOT6	100	95.153	Erinaceus_europaeus
ENSMODG00000003979	CNOT6	100	83.774	ENSELUG00000015981	cnot6b	99	83.069	Esox_lucius
ENSMODG00000003979	CNOT6	100	83.333	ENSELUG00000024580	cnot6a	100	83.333	Esox_lucius
ENSMODG00000003979	CNOT6	100	96.589	ENSFCAG00000001881	CNOT6	100	96.589	Felis_catus
ENSMODG00000003979	CNOT6	100	97.307	ENSFALG00000007699	CNOT6	100	97.307	Ficedula_albicollis
ENSMODG00000003979	CNOT6	100	94.255	ENSFDAG00000001999	CNOT6	100	94.255	Fukomys_damarensis
ENSMODG00000003979	CNOT6	65	90.476	ENSFHEG00000013756	cnot6b	94	94.872	Fundulus_heteroclitus
ENSMODG00000003979	CNOT6	95	85.633	ENSGMOG00000009767	cnot6b	99	85.633	Gadus_morhua
ENSMODG00000003979	CNOT6	100	97.307	ENSGALG00000034316	CNOT6	100	97.307	Gallus_gallus
ENSMODG00000003979	CNOT6	100	85.663	ENSGAFG00000008525	cnot6b	100	85.305	Gambusia_affinis
ENSMODG00000003979	CNOT6	95	83.932	ENSGACG00000018046	cnot6b	99	83.932	Gasterosteus_aculeatus
ENSMODG00000003979	CNOT6	100	80.072	ENSGAGG00000012176	CNOT6	100	80.072	Gopherus_agassizii
ENSMODG00000003979	CNOT6	100	95.871	ENSGGOG00000003675	CNOT6	100	95.871	Gorilla_gorilla
ENSMODG00000003979	CNOT6	100	85.689	ENSHBUG00000002819	cnot6b	100	86.225	Haplochromis_burtoni
ENSMODG00000003979	CNOT6	100	94.434	ENSHGLG00000017756	CNOT6	100	94.434	Heterocephalus_glaber_female
ENSMODG00000003979	CNOT6	100	94.434	ENSHGLG00100005747	CNOT6	100	94.434	Heterocephalus_glaber_male
ENSMODG00000003979	CNOT6	100	84.258	ENSHCOG00000016176	cnot6b	100	84.794	Hippocampus_comes
ENSMODG00000003979	CNOT6	100	86.201	ENSIPUG00000019831	cnot6a	100	86.201	Ictalurus_punctatus
ENSMODG00000003979	CNOT6	100	84.946	ENSIPUG00000017482	cnot6b	100	84.946	Ictalurus_punctatus
ENSMODG00000003979	CNOT6	100	96.768	ENSSTOG00000002803	CNOT6	100	96.768	Ictidomys_tridecemlineatus
ENSMODG00000003979	CNOT6	100	94.434	ENSJJAG00000012296	Cnot6	100	94.434	Jaculus_jaculus
ENSMODG00000003979	CNOT6	100	86.559	ENSKMAG00000004640	cnot6b	100	86.201	Kryptolebias_marmoratus
ENSMODG00000003979	CNOT6	100	84.258	ENSLBEG00000027917	cnot6b	100	84.794	Labrus_bergylta
ENSMODG00000003979	CNOT6	100	90.860	ENSLOCG00000010102	cnot6b	99	90.860	Lepisosteus_oculatus
ENSMODG00000003979	CNOT6	100	96.948	ENSLAFG00000016742	CNOT6	100	96.948	Loxodonta_africana
ENSMODG00000003979	CNOT6	100	95.871	ENSMFAG00000030867	CNOT6	100	95.871	Macaca_fascicularis
ENSMODG00000003979	CNOT6	100	95.871	ENSMMUG00000018690	CNOT6	100	95.871	Macaca_mulatta
ENSMODG00000003979	CNOT6	100	95.871	ENSMNEG00000038565	CNOT6	100	95.871	Macaca_nemestrina
ENSMODG00000003979	CNOT6	100	95.871	ENSMLEG00000010555	CNOT6	100	95.871	Mandrillus_leucophaeus
ENSMODG00000003979	CNOT6	100	87.478	ENSMAMG00000007515	cnot6b	100	87.120	Mastacembelus_armatus
ENSMODG00000003979	CNOT6	100	85.510	ENSMZEG00005012899	cnot6b	100	86.047	Maylandia_zebra
ENSMODG00000003979	CNOT6	100	95.153	ENSMAUG00000019798	Cnot6	100	95.153	Mesocricetus_auratus
ENSMODG00000003979	CNOT6	98	85.662	ENSMICG00000028378	-	99	85.662	Microcebus_murinus
ENSMODG00000003979	CNOT6	100	94.255	ENSMICG00000013018	-	100	94.255	Microcebus_murinus
ENSMODG00000003979	CNOT6	100	94.973	ENSMOCG00000021662	Cnot6	100	94.973	Microtus_ochrogaster
ENSMODG00000003979	CNOT6	100	84.588	ENSMMOG00000003227	cnot6b	100	84.588	Mola_mola
ENSMODG00000003979	CNOT6	100	87.478	ENSMALG00000014251	cnot6b	100	87.120	Monopterus_albus
ENSMODG00000003979	CNOT6	100	95.153	MGP_CAROLIEiJ_G0016277	Cnot6	100	95.153	Mus_caroli
ENSMODG00000003979	CNOT6	100	95.153	ENSMUSG00000020362	Cnot6	100	95.153	Mus_musculus
ENSMODG00000003979	CNOT6	100	95.153	MGP_PahariEiJ_G0017413	Cnot6	100	95.153	Mus_pahari
ENSMODG00000003979	CNOT6	100	94.973	MGP_SPRETEiJ_G0017122	Cnot6	100	94.973	Mus_spretus
ENSMODG00000003979	CNOT6	100	96.409	ENSMPUG00000000587	CNOT6	96	96.409	Mustela_putorius_furo
ENSMODG00000003979	CNOT6	100	94.128	ENSMLUG00000010257	CNOT6	100	94.128	Myotis_lucifugus
ENSMODG00000003979	CNOT6	100	93.896	ENSNGAG00000008269	Cnot6	100	93.896	Nannospalax_galili
ENSMODG00000003979	CNOT6	100	85.689	ENSNBRG00000010798	cnot6b	100	86.225	Neolamprologus_brichardi
ENSMODG00000003979	CNOT6	100	95.512	ENSNLEG00000002322	CNOT6	100	95.512	Nomascus_leucogenys
ENSMODG00000003979	CNOT6	81	99.065	ENSMEUG00000000025	CNOT6	81	99.065	Notamacropus_eugenii
ENSMODG00000003979	CNOT6	88	94.749	ENSOPRG00000008244	-	88	94.749	Ochotona_princeps
ENSMODG00000003979	CNOT6	100	93.357	ENSODEG00000007041	CNOT6	100	93.357	Octodon_degus
ENSMODG00000003979	CNOT6	75	85.816	ENSONIG00000013027	cnot6b	99	85.816	Oreochromis_niloticus
ENSMODG00000003979	CNOT6	100	95.153	ENSOANG00000010226	CNOT6	100	95.153	Ornithorhynchus_anatinus
ENSMODG00000003979	CNOT6	100	95.349	ENSOCUG00000011083	CNOT6	100	95.349	Oryctolagus_cuniculus
ENSMODG00000003979	CNOT6	100	85.331	ENSORLG00000005059	cnot6b	100	84.973	Oryzias_latipes
ENSMODG00000003979	CNOT6	100	85.331	ENSORLG00020012784	cnot6b	100	84.973	Oryzias_latipes_hni
ENSMODG00000003979	CNOT6	94	84.321	ENSORLG00015022658	cnot6b	98	83.939	Oryzias_latipes_hsok
ENSMODG00000003979	CNOT6	100	85.868	ENSOMEG00000005295	cnot6b	100	85.510	Oryzias_melastigma
ENSMODG00000003979	CNOT6	94	95.611	ENSOGAG00000032470	CNOT6	100	95.611	Otolemur_garnettii
ENSMODG00000003979	CNOT6	97	96.125	ENSOARG00000001003	CNOT6	100	96.125	Ovis_aries
ENSMODG00000003979	CNOT6	100	95.871	ENSPPAG00000032253	CNOT6	100	95.871	Pan_paniscus
ENSMODG00000003979	CNOT6	100	96.409	ENSPPRG00000011912	CNOT6	100	96.409	Panthera_pardus
ENSMODG00000003979	CNOT6	100	96.409	ENSPTIG00000016794	CNOT6	100	96.409	Panthera_tigris_altaica
ENSMODG00000003979	CNOT6	100	95.871	ENSPTRG00000017636	CNOT6	100	95.871	Pan_troglodytes
ENSMODG00000003979	CNOT6	100	95.871	ENSPANG00000016191	CNOT6	100	95.871	Papio_anubis
ENSMODG00000003979	CNOT6	100	87.814	ENSPKIG00000021368	cnot6b	100	87.814	Paramormyrops_kingsleyae
ENSMODG00000003979	CNOT6	98	96.691	ENSPSIG00000017307	CNOT6	100	96.691	Pelodiscus_sinensis
ENSMODG00000003979	CNOT6	100	86.404	ENSPMGG00000011238	cnot6b	100	86.047	Periophthalmus_magnuspinnatus
ENSMODG00000003979	CNOT6	100	93.896	ENSPEMG00000000627	Cnot6	100	93.896	Peromyscus_maniculatus_bairdii
ENSMODG00000003979	CNOT6	100	99.461	ENSPCIG00000020319	CNOT6	99	99.461	Phascolarctos_cinereus
ENSMODG00000003979	CNOT6	100	85.842	ENSPFOG00000006291	cnot6b	100	85.484	Poecilia_formosa
ENSMODG00000003979	CNOT6	100	82.796	ENSPLAG00000008266	cnot6b	100	82.437	Poecilia_latipinna
ENSMODG00000003979	CNOT6	100	86.022	ENSPMEG00000009091	cnot6b	100	85.663	Poecilia_mexicana
ENSMODG00000003979	CNOT6	100	85.305	ENSPREG00000003713	cnot6b	100	84.946	Poecilia_reticulata
ENSMODG00000003979	CNOT6	100	95.871	ENSPPYG00000016137	CNOT6	100	95.871	Pongo_abelii
ENSMODG00000003979	CNOT6	71	96.992	ENSPCAG00000005599	-	71	96.992	Procavia_capensis
ENSMODG00000003979	CNOT6	100	90.485	ENSPCOG00000017359	CNOT6	100	91.203	Propithecus_coquereli
ENSMODG00000003979	CNOT6	100	91.382	ENSPVAG00000003069	CNOT6	100	91.382	Pteropus_vampyrus
ENSMODG00000003979	CNOT6	100	85.331	ENSPNYG00000000321	cnot6b	100	85.868	Pundamilia_nyererei
ENSMODG00000003979	CNOT6	100	87.097	ENSPNAG00000029586	cnot6a	100	87.097	Pygocentrus_nattereri
ENSMODG00000003979	CNOT6	100	86.022	ENSPNAG00000028816	cnot6b	100	86.022	Pygocentrus_nattereri
ENSMODG00000003979	CNOT6	100	94.255	ENSRNOG00000054891	Cnot6	100	94.255	Rattus_norvegicus
ENSMODG00000003979	CNOT6	100	95.691	ENSRBIG00000004309	CNOT6	100	95.691	Rhinopithecus_bieti
ENSMODG00000003979	CNOT6	100	95.691	ENSRROG00000035378	CNOT6	100	95.887	Rhinopithecus_roxellana
ENSMODG00000003979	CNOT6	100	95.871	ENSSBOG00000030494	CNOT6	100	95.871	Saimiri_boliviensis_boliviensis
ENSMODG00000003979	CNOT6	100	99.820	ENSSHAG00000017436	CNOT6	100	99.820	Sarcophilus_harrisii
ENSMODG00000003979	CNOT6	100	88.889	ENSSFOG00015015133	CNOT6	100	88.889	Scleropages_formosus
ENSMODG00000003979	CNOT6	100	86.738	ENSSFOG00015022383	cnot6a	96	86.738	Scleropages_formosus
ENSMODG00000003979	CNOT6	100	85.331	ENSSMAG00000003084	cnot6b	100	84.973	Scophthalmus_maximus
ENSMODG00000003979	CNOT6	100	86.941	ENSSDUG00000004151	cnot6b	100	86.583	Seriola_dumerili
ENSMODG00000003979	CNOT6	100	86.047	ENSSLDG00000004448	cnot6b	100	86.583	Seriola_lalandi_dorsalis
ENSMODG00000003979	CNOT6	64	75.978	ENSSARG00000012650	-	100	75.978	Sorex_araneus
ENSMODG00000003979	CNOT6	100	96.050	ENSSPUG00000007893	CNOT6	100	96.050	Sphenodon_punctatus
ENSMODG00000003979	CNOT6	100	87.120	ENSSPAG00000000149	cnot6b	100	86.762	Stegastes_partitus
ENSMODG00000003979	CNOT6	100	96.050	ENSSSCG00000014009	CNOT6	100	96.320	Sus_scrofa
ENSMODG00000003979	CNOT6	100	96.948	ENSTGUG00000001119	CNOT6	100	96.948	Taeniopygia_guttata
ENSMODG00000003979	CNOT6	100	84.201	ENSTRUG00000002818	cnot6b	100	84.201	Takifugu_rubripes
ENSMODG00000003979	CNOT6	100	84.560	ENSTNIG00000004443	cnot6b	99	84.560	Tetraodon_nigroviridis
ENSMODG00000003979	CNOT6	87	66.735	ENSTBEG00000017094	-	100	66.735	Tupaia_belangeri
ENSMODG00000003979	CNOT6	100	96.230	ENSTTRG00000009363	CNOT6	100	96.230	Tursiops_truncatus
ENSMODG00000003979	CNOT6	77	96.503	ENSUAMG00000004579	CNOT6	88	96.503	Ursus_americanus
ENSMODG00000003979	CNOT6	100	92.295	ENSUMAG00000024577	CNOT6	100	92.295	Ursus_maritimus
ENSMODG00000003979	CNOT6	83	94.860	ENSVPAG00000003593	CNOT6	83	94.860	Vicugna_pacos
ENSMODG00000003979	CNOT6	100	96.589	ENSVVUG00000026940	CNOT6	100	96.589	Vulpes_vulpes
ENSMODG00000003979	CNOT6	100	83.154	ENSXCOG00000003360	cnot6b	100	82.796	Xiphophorus_couchianus
ENSMODG00000003979	CNOT6	100	86.022	ENSXMAG00000008730	cnot6b	100	85.663	Xiphophorus_maculatus