EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000004117 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 1014 bases
Position: chrUn:90333581-90334594
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000005067	YTH	PF04146.15	1.6e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000005176	-	1014	-	ENSMODP00000005067	338 (aa)	-	H9H649

Gene Model

Click here to download ENSMODG00000004117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000004117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000004117	-	100	99.704	ENSMODG00000009173	-	72	99.704
ENSMODG00000004117	-	100	60.059	ENSMODG00000014337	-	57	59.763

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000004117	-	92	62.300	ENSG00000083896	YTHDC1	77	47.222	Homo_sapiens
ENSMODG00000004117	-	93	49.682	ENSACIG00000019728	ythdc1	50	48.457	Amphilophus_citrinellus
ENSMODG00000004117	-	93	49.412	ENSAOCG00000000239	ythdc1	50	49.143	Amphiprion_ocellaris
ENSMODG00000004117	-	74	58.730	ENSACLG00000019371	ythdc1	50	48.857	Astatotilapia_calliptera
ENSMODG00000004117	-	92	57.276	ENSAMXG00000006978	ythdc1	51	57.020	Astyanax_mexicanus
ENSMODG00000004117	-	92	63.259	ENSCAFG00020027112	YTHDC1	50	56.676	Canis_lupus_dingo
ENSMODG00000004117	-	66	70.000	ENSCHOG00000006136	-	57	70.000	Choloepus_hoffmanni
ENSMODG00000004117	-	92	61.981	ENSCPBG00000021965	YTHDC1	52	59.706	Chrysemys_picta_bellii
ENSMODG00000004117	-	74	57.937	ENSCSEG00000020404	ythdc1	50	50.581	Cynoglossus_semilaevis
ENSMODG00000004117	-	74	59.363	ENSCVAG00000022349	ythdc1	51	48.509	Cyprinodon_variegatus
ENSMODG00000004117	-	92	56.966	ENSDARG00000051953	ythdc1	51	57.307	Danio_rerio
ENSMODG00000004117	-	92	63.259	ENSEASG00005018383	YTHDC1	50	61.176	Equus_asinus_asinus
ENSMODG00000004117	-	92	63.259	ENSECAG00000018303	YTHDC1	51	61.176	Equus_caballus
ENSMODG00000004117	-	92	55.287	ENSELUG00000014029	ythdc1	50	52.661	Esox_lucius
ENSMODG00000004117	-	92	62.821	ENSFALG00000006581	YTHDC1	68	60.882	Ficedula_albicollis
ENSMODG00000004117	-	92	61.661	ENSGAGG00000007108	YTHDC1	50	59.412	Gopherus_agassizii
ENSMODG00000004117	-	74	58.730	ENSHBUG00000019288	ythdc1	50	48.857	Haplochromis_burtoni
ENSMODG00000004117	-	60	61.386	ENSHCOG00000001520	ythdc1	63	44.737	Hippocampus_comes
ENSMODG00000004117	-	92	56.347	ENSIPUG00000018136	ythdc1	51	55.587	Ictalurus_punctatus
ENSMODG00000004117	-	75	56.126	ENSKMAG00000006483	ythdc1	71	48.991	Kryptolebias_marmoratus
ENSMODG00000004117	-	93	52.548	ENSLBEG00000020831	ythdc1	51	51.235	Labrus_bergylta
ENSMODG00000004117	-	92	60.064	ENSLACG00000004893	YTHDC1	50	58.187	Latimeria_chalumnae
ENSMODG00000004117	-	92	60.510	ENSLOCG00000003045	ythdc1	51	60.997	Lepisosteus_oculatus
ENSMODG00000004117	-	74	58.730	ENSMZEG00005023173	ythdc1	50	48.857	Maylandia_zebra
ENSMODG00000004117	-	93	47.452	ENSNBRG00000007663	ythdc1	59	49.394	Neolamprologus_brichardi
ENSMODG00000004117	-	93	51.235	ENSONIG00000012651	ythdc1	50	49.143	Oreochromis_niloticus
ENSMODG00000004117	-	93	49.853	ENSORLG00000030544	ythdc1	53	49.861	Oryzias_latipes
ENSMODG00000004117	-	74	58.730	ENSORLG00020019316	ythdc1	53	49.861	Oryzias_latipes_hni
ENSMODG00000004117	-	93	50.755	ENSOMEG00000000551	ythdc1	52	49.860	Oryzias_melastigma
ENSMODG00000004117	-	92	58.044	ENSPKIG00000018497	ythdc1	50	57.391	Paramormyrops_kingsleyae
ENSMODG00000004117	-	92	62.939	ENSPCIG00000006870	YTHDC1	50	60.588	Phascolarctos_cinereus
ENSMODG00000004117	-	93	48.521	ENSPFOG00000013404	ythdc1	51	49.133	Poecilia_formosa
ENSMODG00000004117	-	93	48.521	ENSPLAG00000011079	ythdc1	72	48.696	Poecilia_latipinna
ENSMODG00000004117	-	93	48.521	ENSPMEG00000009238	ythdc1	51	49.133	Poecilia_mexicana
ENSMODG00000004117	-	92	62.500	ENSPPYG00000014726	YTHDC1	54	60.294	Pongo_abelii
ENSMODG00000004117	-	74	58.730	ENSPNYG00000011687	ythdc1	50	48.857	Pundamilia_nyererei
ENSMODG00000004117	-	92	58.514	ENSPNAG00000028365	ythdc1	51	57.020	Pygocentrus_nattereri
ENSMODG00000004117	-	92	63.141	ENSSHAG00000002538	YTHDC1	54	60.588	Sarcophilus_harrisii
ENSMODG00000004117	-	92	57.453	ENSSFOG00015003298	ythdc1	51	57.593	Scleropages_formosus
ENSMODG00000004117	-	76	55.985	ENSSMAG00000009086	ythdc1	50	50.435	Scophthalmus_maximus
ENSMODG00000004117	-	92	62.821	ENSSARG00000010960	YTHDC1	59	60.588	Sorex_araneus
ENSMODG00000004117	-	92	62.342	ENSSPUG00000009357	YTHDC1	52	60.234	Sphenodon_punctatus
ENSMODG00000004117	-	92	63.259	ENSSSCG00000035505	YTHDC1	50	59.483	Sus_scrofa
ENSMODG00000004117	-	74	56.746	ENSTRUG00000010142	ythdc1	54	48.991	Takifugu_rubripes
ENSMODG00000004117	-	93	54.459	ENSTNIG00000013243	ythdc1	54	51.775	Tetraodon_nigroviridis
ENSMODG00000004117	-	92	63.259	ENSUAMG00000010388	YTHDC1	51	61.176	Ursus_americanus
ENSMODG00000004117	-	92	63.259	ENSVVUG00000005387	YTHDC1	50	61.176	Vulpes_vulpes
ENSMODG00000004117	-	74	56.972	ENSXMAG00000005196	ythdc1	51	48.844	Xiphophorus_maculatus