EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000004289 (Gene tree)
Gene ID: 100016049
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 48834 bases
Position: chr2:66399777-66448610
Accession: 100016049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000005284	zf-CCCH	PF00642.24	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000005398	RC3H1-201	3478	XM_016429950	ENSMODP00000005284	1133 (aa)	XP_016285436	F6SY20

Gene Model

Click here to download ENSMODG00000004289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000004289's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000004289	RC3H1	91	54.262	ENSMODG00000019725	RC3H2	73	53.853

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000004289	RC3H1	100	92.328	ENSG00000135870	RC3H1	100	92.240	Homo_sapiens
ENSMODG00000004289	RC3H1	100	92.063	ENSAMEG00000015657	RC3H1	100	91.975	Ailuropoda_melanoleuca
ENSMODG00000004289	RC3H1	100	87.631	ENSAPLG00000005341	RC3H1	100	87.097	Anas_platyrhynchos
ENSMODG00000004289	RC3H1	100	84.045	ENSACAG00000015271	RC3H1	100	84.105	Anolis_carolinensis
ENSMODG00000004289	RC3H1	100	92.328	ENSANAG00000036716	RC3H1	100	92.240	Aotus_nancymaae
ENSMODG00000004289	RC3H1	100	91.358	ENSBTAG00000052708	RC3H1	100	91.270	Bos_taurus
ENSMODG00000004289	RC3H1	100	92.152	ENSCJAG00000009106	RC3H1	100	92.063	Callithrix_jacchus
ENSMODG00000004289	RC3H1	100	91.799	ENSCAFG00000014434	RC3H1	100	91.711	Canis_familiaris
ENSMODG00000004289	RC3H1	100	91.718	ENSCAFG00020017112	RC3H1	99	97.753	Canis_lupus_dingo
ENSMODG00000004289	RC3H1	100	91.534	ENSCHIG00000002873	RC3H1	100	91.446	Capra_hircus
ENSMODG00000004289	RC3H1	99	91.270	ENSTSYG00000003913	RC3H1	99	91.182	Carlito_syrichta
ENSMODG00000004289	RC3H1	100	88.106	ENSCPOG00000004349	RC3H1	100	88.194	Cavia_porcellus
ENSMODG00000004289	RC3H1	100	90.388	ENSCCAG00000025652	RC3H1	100	90.300	Cebus_capucinus
ENSMODG00000004289	RC3H1	100	92.504	ENSCATG00000033497	RC3H1	100	92.416	Cercocebus_atys
ENSMODG00000004289	RC3H1	100	90.925	ENSCLAG00000011267	RC3H1	100	91.013	Chinchilla_lanigera
ENSMODG00000004289	RC3H1	96	92.640	ENSCSAG00000011823	RC3H1	85	92.548	Chlorocebus_sabaeus
ENSMODG00000004289	RC3H1	100	88.421	ENSCPBG00000014670	RC3H1	100	88.070	Chrysemys_picta_bellii
ENSMODG00000004289	RC3H1	100	92.511	ENSCANG00000032120	RC3H1	100	92.423	Colobus_angolensis_palliatus
ENSMODG00000004289	RC3H1	100	90.564	ENSCGRG00001020812	Rc3h1	100	90.476	Cricetulus_griseus_chok1gshd
ENSMODG00000004289	RC3H1	100	90.564	ENSCGRG00000011952	Rc3h1	100	90.476	Cricetulus_griseus_crigri
ENSMODG00000004289	RC3H1	55	88.907	ENSDNOG00000011494	RC3H1	99	88.907	Dasypus_novemcinctus
ENSMODG00000004289	RC3H1	100	90.388	ENSDORG00000004855	Rc3h1	100	90.300	Dipodomys_ordii
ENSMODG00000004289	RC3H1	81	92.566	ENSETEG00000012064	RC3H1	87	92.566	Echinops_telfairi
ENSMODG00000004289	RC3H1	100	91.005	ENSEASG00005017000	RC3H1	100	90.917	Equus_asinus_asinus
ENSMODG00000004289	RC3H1	100	90.829	ENSECAG00000021208	RC3H1	100	90.741	Equus_caballus
ENSMODG00000004289	RC3H1	83	94.958	ENSEEUG00000014861	RC3H1	93	82.375	Erinaceus_europaeus
ENSMODG00000004289	RC3H1	100	92.416	ENSFCAG00000014924	RC3H1	100	92.328	Felis_catus
ENSMODG00000004289	RC3H1	100	86.475	ENSFALG00000002947	RC3H1	100	85.490	Ficedula_albicollis
ENSMODG00000004289	RC3H1	100	90.925	ENSFDAG00000013303	RC3H1	100	90.837	Fukomys_damarensis
ENSMODG00000004289	RC3H1	100	86.591	ENSGALG00000004587	RC3H1	100	86.053	Gallus_gallus
ENSMODG00000004289	RC3H1	93	96.522	ENSGAGG00000018194	RC3H1	100	86.754	Gopherus_agassizii
ENSMODG00000004289	RC3H1	100	85.852	ENSGGOG00000005735	RC3H1	100	85.764	Gorilla_gorilla
ENSMODG00000004289	RC3H1	88	86.277	ENSHGLG00000004183	-	99	86.277	Heterocephalus_glaber_female
ENSMODG00000004289	RC3H1	100	90.396	ENSHGLG00100008577	RC3H1	100	90.308	Heterocephalus_glaber_male
ENSMODG00000004289	RC3H1	100	91.806	ENSSTOG00000016033	RC3H1	100	92.070	Ictidomys_tridecemlineatus
ENSMODG00000004289	RC3H1	100	90.300	ENSJJAG00000018915	Rc3h1	100	90.300	Jaculus_jaculus
ENSMODG00000004289	RC3H1	100	74.848	ENSLACG00000016186	RC3H1	100	77.941	Latimeria_chalumnae
ENSMODG00000004289	RC3H1	97	92.903	ENSLAFG00000004367	RC3H1	100	92.812	Loxodonta_africana
ENSMODG00000004289	RC3H1	100	92.416	ENSMFAG00000033725	RC3H1	100	92.328	Macaca_fascicularis
ENSMODG00000004289	RC3H1	100	92.416	ENSMMUG00000000630	RC3H1	100	92.328	Macaca_mulatta
ENSMODG00000004289	RC3H1	100	92.504	ENSMNEG00000035968	RC3H1	100	92.416	Macaca_nemestrina
ENSMODG00000004289	RC3H1	100	92.416	ENSMLEG00000037455	RC3H1	100	92.328	Mandrillus_leucophaeus
ENSMODG00000004289	RC3H1	88	90.644	ENSMAUG00000020864	Rc3h1	94	90.644	Mesocricetus_auratus
ENSMODG00000004289	RC3H1	100	92.504	ENSMICG00000003000	RC3H1	100	92.416	Microcebus_murinus
ENSMODG00000004289	RC3H1	93	89.215	ENSMOCG00000016587	Rc3h1	98	89.120	Microtus_ochrogaster
ENSMODG00000004289	RC3H1	100	89.497	MGP_CAROLIEiJ_G0014756	Rc3h1	100	89.683	Mus_caroli
ENSMODG00000004289	RC3H1	100	89.418	ENSMUSG00000040423	Rc3h1	100	89.330	Mus_musculus
ENSMODG00000004289	RC3H1	100	89.594	MGP_PahariEiJ_G0027992	Rc3h1	100	89.506	Mus_pahari
ENSMODG00000004289	RC3H1	100	89.330	MGP_SPRETEiJ_G0015563	Rc3h1	100	89.242	Mus_spretus
ENSMODG00000004289	RC3H1	100	91.887	ENSMPUG00000004747	RC3H1	100	91.799	Mustela_putorius_furo
ENSMODG00000004289	RC3H1	100	91.005	ENSMLUG00000011127	RC3H1	100	90.917	Myotis_lucifugus
ENSMODG00000004289	RC3H1	100	91.270	ENSNGAG00000011135	Rc3h1	100	91.182	Nannospalax_galili
ENSMODG00000004289	RC3H1	100	92.504	ENSNLEG00000015327	RC3H1	100	92.416	Nomascus_leucogenys
ENSMODG00000004289	RC3H1	99	79.505	ENSOPRG00000013068	RC3H1	99	79.240	Ochotona_princeps
ENSMODG00000004289	RC3H1	100	90.837	ENSODEG00000014185	RC3H1	100	90.925	Octodon_degus
ENSMODG00000004289	RC3H1	100	91.434	ENSOANG00000000924	RC3H1	100	91.521	Ornithorhynchus_anatinus
ENSMODG00000004289	RC3H1	99	91.771	ENSOCUG00000004930	RC3H1	98	91.682	Oryctolagus_cuniculus
ENSMODG00000004289	RC3H1	100	85.475	ENSOGAG00000004044	RC3H1	100	85.387	Otolemur_garnettii
ENSMODG00000004289	RC3H1	100	91.674	ENSOARG00000013011	RC3H1	100	91.586	Ovis_aries
ENSMODG00000004289	RC3H1	100	92.335	ENSPPAG00000039253	RC3H1	100	92.247	Pan_paniscus
ENSMODG00000004289	RC3H1	100	91.711	ENSPPRG00000009007	RC3H1	100	91.623	Panthera_pardus
ENSMODG00000004289	RC3H1	100	91.659	ENSPTIG00000015326	RC3H1	100	91.835	Panthera_tigris_altaica
ENSMODG00000004289	RC3H1	100	92.335	ENSPTRG00000001702	RC3H1	100	92.247	Pan_troglodytes
ENSMODG00000004289	RC3H1	100	92.504	ENSPANG00000008886	RC3H1	100	92.416	Papio_anubis
ENSMODG00000004289	RC3H1	100	87.818	ENSPSIG00000016181	RC3H1	100	87.905	Pelodiscus_sinensis
ENSMODG00000004289	RC3H1	100	90.035	ENSPEMG00000011966	Rc3h1	100	89.859	Peromyscus_maniculatus_bairdii
ENSMODG00000004289	RC3H1	70	98.352	ENSPCIG00000002058	RC3H1	98	98.352	Phascolarctos_cinereus
ENSMODG00000004289	RC3H1	100	89.594	ENSPPYG00000000490	RC3H1	98	92.161	Pongo_abelii
ENSMODG00000004289	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSMODG00000004289	RC3H1	83	90.715	ENSPCOG00000021795	RC3H1	96	90.608	Propithecus_coquereli
ENSMODG00000004289	RC3H1	100	82.981	ENSPVAG00000007593	RC3H1	100	82.892	Pteropus_vampyrus
ENSMODG00000004289	RC3H1	97	61.741	ENSPNAG00000023439	rc3h1a	95	90.766	Pygocentrus_nattereri
ENSMODG00000004289	RC3H1	100	92.423	ENSRBIG00000037743	RC3H1	100	92.335	Rhinopithecus_bieti
ENSMODG00000004289	RC3H1	100	92.504	ENSRROG00000036546	RC3H1	100	92.416	Rhinopithecus_roxellana
ENSMODG00000004289	RC3H1	93	84.354	ENSSBOG00000010664	RC3H1	100	85.917	Saimiri_boliviensis_boliviensis
ENSMODG00000004289	RC3H1	100	97.707	ENSSHAG00000007589	RC3H1	100	97.707	Sarcophilus_harrisii
ENSMODG00000004289	RC3H1	87	86.261	ENSSARG00000004660	RC3H1	85	86.261	Sorex_araneus
ENSMODG00000004289	RC3H1	100	83.975	ENSSPUG00000018472	RC3H1	100	84.224	Sphenodon_punctatus
ENSMODG00000004289	RC3H1	100	92.504	ENSSSCG00000015498	RC3H1	100	92.416	Sus_scrofa
ENSMODG00000004289	RC3H1	100	86.930	ENSTGUG00000004090	RC3H1	100	86.216	Taeniopygia_guttata
ENSMODG00000004289	RC3H1	89	93.733	ENSTBEG00000005015	RC3H1	89	93.733	Tupaia_belangeri
ENSMODG00000004289	RC3H1	100	91.718	ENSTTRG00000008572	RC3H1	100	91.630	Tursiops_truncatus
ENSMODG00000004289	RC3H1	100	91.711	ENSUAMG00000019525	RC3H1	100	91.623	Ursus_americanus
ENSMODG00000004289	RC3H1	100	91.982	ENSUMAG00000020087	RC3H1	100	91.894	Ursus_maritimus
ENSMODG00000004289	RC3H1	91	98.198	ENSVPAG00000002591	RC3H1	92	98.198	Vicugna_pacos
ENSMODG00000004289	RC3H1	100	91.652	ENSVVUG00000014201	RC3H1	100	91.037	Vulpes_vulpes
ENSMODG00000004289	RC3H1	100	78.068	ENSXETG00000020030	rc3h1	100	77.981	Xenopus_tropicalis