EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000004304 (Gene tree)
Gene ID: 100024303
Gene Symbol: SLBP
Alias: HBP
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 14980 bases
Position: chr5:234116146-234131125
Accession: 10904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000005298	SLBP_RNA_bind	PF15247.6	3.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000005412	SLBP-201	786	-	ENSMODP00000005298	261 (aa)	-	F6SX19

Gene Model

Click here to download ENSMODG00000004304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000004304's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000004304	SLBP	100	78.927	ENSG00000163950	SLBP	92	82.488	Homo_sapiens
ENSMODG00000004304	SLBP	91	50.382	ENSAPOG00000004953	slbp	74	56.604	Acanthochromis_polyacanthus
ENSMODG00000004304	SLBP	83	87.558	ENSAMEG00000016915	SLBP	100	87.558	Ailuropoda_melanoleuca
ENSMODG00000004304	SLBP	89	53.441	ENSACIG00000022308	slbp	80	57.143	Amphilophus_citrinellus
ENSMODG00000004304	SLBP	89	51.172	ENSAOCG00000024545	slbp	74	56.604	Amphiprion_ocellaris
ENSMODG00000004304	SLBP	91	50.000	ENSAPEG00000017629	slbp	74	56.132	Amphiprion_percula
ENSMODG00000004304	SLBP	89	53.696	ENSATEG00000016358	slbp	75	57.944	Anabas_testudineus
ENSMODG00000004304	SLBP	83	80.000	ENSAPLG00000015989	-	100	78.182	Anas_platyrhynchos
ENSMODG00000004304	SLBP	100	76.866	ENSANAG00000034769	SLBP	92	83.871	Aotus_nancymaae
ENSMODG00000004304	SLBP	89	50.394	ENSACLG00000007036	-	78	51.364	Astatotilapia_calliptera
ENSMODG00000004304	SLBP	76	62.562	ENSAMXG00000014527	slbp	74	60.099	Astyanax_mexicanus
ENSMODG00000004304	SLBP	100	80.077	ENSBTAG00000001328	SLBP	92	80.934	Bos_taurus
ENSMODG00000004304	SLBP	100	78.161	ENSCJAG00000001790	SLBP	93	75.746	Callithrix_jacchus
ENSMODG00000004304	SLBP	100	79.693	ENSCAFG00000015016	SLBP	93	79.693	Canis_familiaris
ENSMODG00000004304	SLBP	100	79.693	ENSCAFG00020012334	SLBP	93	79.693	Canis_lupus_dingo
ENSMODG00000004304	SLBP	100	80.460	ENSCHIG00000019364	SLBP	93	80.545	Capra_hircus
ENSMODG00000004304	SLBP	100	80.077	ENSTSYG00000000376	SLBP	92	82.488	Carlito_syrichta
ENSMODG00000004304	SLBP	69	81.768	ENSCAPG00000016340	SLBP	100	81.768	Cavia_aperea
ENSMODG00000004304	SLBP	99	77.692	ENSCPOG00000000031	SLBP	91	77.692	Cavia_porcellus
ENSMODG00000004304	SLBP	100	78.927	ENSCATG00000029173	SLBP	92	82.488	Cercocebus_atys
ENSMODG00000004304	SLBP	99	79.457	ENSCLAG00000008157	SLBP	93	79.457	Chinchilla_lanigera
ENSMODG00000004304	SLBP	100	64.286	ENSCSAG00000015628	SLBP	92	63.498	Chlorocebus_sabaeus
ENSMODG00000004304	SLBP	98	76.834	ENSCPBG00000000746	SLBP	92	76.448	Chrysemys_picta_bellii
ENSMODG00000004304	SLBP	83	82.407	ENSCANG00000041008	SLBP	100	81.944	Colobus_angolensis_palliatus
ENSMODG00000004304	SLBP	98	81.250	ENSCGRG00001012991	-	93	81.250	Cricetulus_griseus_chok1gshd
ENSMODG00000004304	SLBP	99	82.171	ENSCGRG00001009760	-	92	82.171	Cricetulus_griseus_chok1gshd
ENSMODG00000004304	SLBP	99	82.171	ENSCGRG00000004506	Slbp	92	82.171	Cricetulus_griseus_crigri
ENSMODG00000004304	SLBP	90	52.124	ENSCSEG00000020337	-	74	58.852	Cynoglossus_semilaevis
ENSMODG00000004304	SLBP	77	55.924	ENSCVAG00000019592	-	76	53.623	Cyprinodon_variegatus
ENSMODG00000004304	SLBP	89	51.210	ENSDARG00000100558	slbp	66	59.314	Danio_rerio
ENSMODG00000004304	SLBP	100	75.758	ENSDNOG00000047539	SLBP	95	75.758	Dasypus_novemcinctus
ENSMODG00000004304	SLBP	83	85.185	ENSDORG00000003028	Slbp	100	85.185	Dipodomys_ordii
ENSMODG00000004304	SLBP	85	79.730	ENSETEG00000004641	SLBP	94	79.730	Echinops_telfairi
ENSMODG00000004304	SLBP	74	86.979	ENSEASG00005022714	SLBP	100	86.979	Equus_asinus_asinus
ENSMODG00000004304	SLBP	74	82.383	ENSECAG00000011689	SLBP	61	82.383	Equus_caballus
ENSMODG00000004304	SLBP	88	51.230	ENSELUG00000012854	slbp	73	56.098	Esox_lucius
ENSMODG00000004304	SLBP	100	81.609	ENSFCAG00000000169	SLBP	96	85.398	Felis_catus
ENSMODG00000004304	SLBP	98	72.868	ENSFALG00000010003	-	93	71.318	Ficedula_albicollis
ENSMODG00000004304	SLBP	99	81.395	ENSFDAG00000007592	SLBP	99	81.395	Fukomys_damarensis
ENSMODG00000004304	SLBP	88	50.794	ENSFHEG00000007497	slbp	77	52.358	Fundulus_heteroclitus
ENSMODG00000004304	SLBP	56	72.000	ENSGMOG00000015352	slbp	96	72.000	Gadus_morhua
ENSMODG00000004304	SLBP	98	74.806	ENSGALG00000015712	SLBP	93	73.256	Gallus_gallus
ENSMODG00000004304	SLBP	88	52.549	ENSGAFG00000019577	slbp	76	57.767	Gambusia_affinis
ENSMODG00000004304	SLBP	72	58.376	ENSGACG00000019596	slbp	78	58.763	Gasterosteus_aculeatus
ENSMODG00000004304	SLBP	84	76.471	ENSGAGG00000012096	SLBP	81	76.617	Gopherus_agassizii
ENSMODG00000004304	SLBP	100	78.927	ENSGGOG00000003167	SLBP	92	82.488	Gorilla_gorilla
ENSMODG00000004304	SLBP	89	50.195	ENSHBUG00000003338	-	78	51.364	Haplochromis_burtoni
ENSMODG00000004304	SLBP	97	71.146	ENSHGLG00000008313	-	95	69.767	Heterocephalus_glaber_female
ENSMODG00000004304	SLBP	99	69.767	ENSHGLG00000005955	-	94	70.051	Heterocephalus_glaber_female
ENSMODG00000004304	SLBP	92	71.130	ENSHGLG00000010461	-	96	71.429	Heterocephalus_glaber_female
ENSMODG00000004304	SLBP	99	81.008	ENSHGLG00100014018	-	94	81.633	Heterocephalus_glaber_male
ENSMODG00000004304	SLBP	92	71.130	ENSHGLG00100014906	-	96	71.429	Heterocephalus_glaber_male
ENSMODG00000004304	SLBP	97	71.937	ENSHGLG00100010510	-	95	70.543	Heterocephalus_glaber_male
ENSMODG00000004304	SLBP	91	49.609	ENSHCOG00000013425	slbp	67	60.526	Hippocampus_comes
ENSMODG00000004304	SLBP	77	55.446	ENSIPUG00000016780	slbp	72	58.115	Ictalurus_punctatus
ENSMODG00000004304	SLBP	100	81.226	ENSSTOG00000003262	SLBP	93	81.226	Ictidomys_tridecemlineatus
ENSMODG00000004304	SLBP	100	81.226	ENSJJAG00000002394	-	92	81.008	Jaculus_jaculus
ENSMODG00000004304	SLBP	100	81.992	ENSJJAG00000020549	-	92	82.558	Jaculus_jaculus
ENSMODG00000004304	SLBP	89	51.765	ENSKMAG00000008187	slbp	73	57.971	Kryptolebias_marmoratus
ENSMODG00000004304	SLBP	90	50.775	ENSLBEG00000024709	slbp	73	54.589	Labrus_bergylta
ENSMODG00000004304	SLBP	95	56.809	ENSLACG00000014623	SLBP	91	56.420	Latimeria_chalumnae
ENSMODG00000004304	SLBP	95	53.933	ENSLOCG00000011027	slbp	89	50.562	Lepisosteus_oculatus
ENSMODG00000004304	SLBP	85	81.614	ENSLAFG00000012933	SLBP	92	81.614	Loxodonta_africana
ENSMODG00000004304	SLBP	98	79.297	ENSMFAG00000030130	SLBP	93	67.054	Macaca_fascicularis
ENSMODG00000004304	SLBP	99	77.358	ENSMMUG00000032303	SLBP	96	82.488	Macaca_mulatta
ENSMODG00000004304	SLBP	99	59.623	ENSMNEG00000008082	SLBP	90	59.245	Macaca_nemestrina
ENSMODG00000004304	SLBP	96	74.400	ENSMLEG00000024639	SLBP	87	81.567	Mandrillus_leucophaeus
ENSMODG00000004304	SLBP	89	49.213	ENSMAMG00000001046	-	88	48.302	Mastacembelus_armatus
ENSMODG00000004304	SLBP	89	50.195	ENSMZEG00005017261	-	78	51.364	Maylandia_zebra
ENSMODG00000004304	SLBP	83	79.263	ENSMGAG00000013085	SLBP	100	77.419	Meleagris_gallopavo
ENSMODG00000004304	SLBP	100	81.226	ENSMAUG00000009490	Slbp	93	81.226	Mesocricetus_auratus
ENSMODG00000004304	SLBP	100	77.011	ENSMICG00000014244	SLBP	96	77.434	Microcebus_murinus
ENSMODG00000004304	SLBP	100	81.226	ENSMOCG00000015826	Slbp	93	81.226	Microtus_ochrogaster
ENSMODG00000004304	SLBP	72	59.391	ENSMMOG00000010181	slbp	79	56.995	Mola_mola
ENSMODG00000004304	SLBP	87	50.593	ENSMALG00000013883	-	54	56.938	Monopterus_albus
ENSMODG00000004304	SLBP	100	81.609	MGP_CAROLIEiJ_G0027117	Slbp	93	81.609	Mus_caroli
ENSMODG00000004304	SLBP	100	81.226	ENSMUSG00000004642	Slbp	93	81.226	Mus_musculus
ENSMODG00000004304	SLBP	100	81.226	MGP_PahariEiJ_G0016901	Slbp	93	81.226	Mus_pahari
ENSMODG00000004304	SLBP	100	81.226	MGP_SPRETEiJ_G0028113	Slbp	93	81.226	Mus_spretus
ENSMODG00000004304	SLBP	70	85.870	ENSMPUG00000011139	SLBP	100	82.564	Mustela_putorius_furo
ENSMODG00000004304	SLBP	83	80.275	ENSMLUG00000004425	SLBP	93	80.275	Myotis_lucifugus
ENSMODG00000004304	SLBP	100	80.843	ENSNGAG00000020799	Slbp	93	80.843	Nannospalax_galili
ENSMODG00000004304	SLBP	77	54.545	ENSNBRG00000006044	-	83	53.846	Neolamprologus_brichardi
ENSMODG00000004304	SLBP	100	76.866	ENSNLEG00000000048	SLBP	92	82.488	Nomascus_leucogenys
ENSMODG00000004304	SLBP	68	96.629	ENSMEUG00000002501	SLBP	100	96.629	Notamacropus_eugenii
ENSMODG00000004304	SLBP	100	78.927	ENSODEG00000012641	SLBP	94	79.457	Octodon_degus
ENSMODG00000004304	SLBP	89	51.953	ENSONIG00000017469	-	78	52.968	Oreochromis_niloticus
ENSMODG00000004304	SLBP	84	86.758	ENSOANG00000014243	SLBP	96	86.758	Ornithorhynchus_anatinus
ENSMODG00000004304	SLBP	92	50.787	ENSORLG00000024887	-	91	47.012	Oryzias_latipes
ENSMODG00000004304	SLBP	91	50.988	ENSORLG00020007798	slbp	90	46.825	Oryzias_latipes_hni
ENSMODG00000004304	SLBP	92	50.000	ENSORLG00015016656	slbp	90	46.215	Oryzias_latipes_hsok
ENSMODG00000004304	SLBP	93	50.781	ENSOMEG00000010818	slbp	91	49.012	Oryzias_melastigma
ENSMODG00000004304	SLBP	100	78.927	ENSOGAG00000009750	SLBP	93	78.544	Otolemur_garnettii
ENSMODG00000004304	SLBP	83	87.558	ENSOARG00000016090	SLBP	100	87.558	Ovis_aries
ENSMODG00000004304	SLBP	100	78.927	ENSPPAG00000033300	SLBP	92	82.488	Pan_paniscus
ENSMODG00000004304	SLBP	98	82.745	ENSPPRG00000016897	SLBP	100	82.745	Panthera_pardus
ENSMODG00000004304	SLBP	74	88.542	ENSPTIG00000015057	SLBP	100	88.542	Panthera_tigris_altaica
ENSMODG00000004304	SLBP	100	78.544	ENSPTRG00000015832	SLBP	92	82.488	Pan_troglodytes
ENSMODG00000004304	SLBP	98	76.515	ENSPANG00000004932	SLBP	92	82.488	Papio_anubis
ENSMODG00000004304	SLBP	94	53.282	ENSPKIG00000006183	slbp	70	60.199	Paramormyrops_kingsleyae
ENSMODG00000004304	SLBP	69	58.378	ENSPMGG00000017684	-	88	59.341	Periophthalmus_magnuspinnatus
ENSMODG00000004304	SLBP	100	81.609	ENSPEMG00000018369	Slbp	93	81.609	Peromyscus_maniculatus_bairdii
ENSMODG00000004304	SLBP	100	91.144	ENSPCIG00000013575	SLBP	78	91.481	Phascolarctos_cinereus
ENSMODG00000004304	SLBP	88	52.549	ENSPFOG00000000462	slbp	72	57.767	Poecilia_formosa
ENSMODG00000004304	SLBP	88	52.157	ENSPLAG00000008300	slbp	76	55.288	Poecilia_latipinna
ENSMODG00000004304	SLBP	88	52.549	ENSPMEG00000020807	slbp	72	57.767	Poecilia_mexicana
ENSMODG00000004304	SLBP	88	52.549	ENSPREG00000004561	slbp	72	57.767	Poecilia_reticulata
ENSMODG00000004304	SLBP	100	78.927	ENSPPYG00000014529	SLBP	93	78.544	Pongo_abelii
ENSMODG00000004304	SLBP	100	78.544	ENSPCOG00000017399	SLBP	96	78.761	Propithecus_coquereli
ENSMODG00000004304	SLBP	98	75.486	ENSPVAG00000002807	SLBP	91	75.486	Pteropus_vampyrus
ENSMODG00000004304	SLBP	89	50.195	ENSPNYG00000005451	-	78	51.364	Pundamilia_nyererei
ENSMODG00000004304	SLBP	89	57.025	ENSPNAG00000018503	slbp	74	61.000	Pygocentrus_nattereri
ENSMODG00000004304	SLBP	100	80.843	ENSRNOG00000037162	Slbp	93	80.843	Rattus_norvegicus
ENSMODG00000004304	SLBP	100	78.927	ENSRBIG00000039159	SLBP	92	82.488	Rhinopithecus_bieti
ENSMODG00000004304	SLBP	99	79.457	ENSRROG00000030081	SLBP	95	77.778	Rhinopithecus_roxellana
ENSMODG00000004304	SLBP	74	83.854	ENSSBOG00000033897	SLBP	100	83.333	Saimiri_boliviensis_boliviensis
ENSMODG00000004304	SLBP	100	92.251	ENSSHAG00000013939	SLBP	91	92.251	Sarcophilus_harrisii
ENSMODG00000004304	SLBP	87	57.083	ENSSFOG00015019429	slbp	71	59.596	Scleropages_formosus
ENSMODG00000004304	SLBP	79	54.222	ENSSMAG00000016028	-	68	60.000	Scophthalmus_maximus
ENSMODG00000004304	SLBP	89	52.590	ENSSDUG00000000855	-	74	59.223	Seriola_dumerili
ENSMODG00000004304	SLBP	55	56.000	ENSSLDG00000022893	-	86	56.849	Seriola_lalandi_dorsalis
ENSMODG00000004304	SLBP	78	40.758	ENSSLDG00000007554	-	63	40.976	Seriola_lalandi_dorsalis
ENSMODG00000004304	SLBP	99	66.795	ENSSPUG00000016007	SLBP	96	66.279	Sphenodon_punctatus
ENSMODG00000004304	SLBP	89	52.174	ENSSPAG00000004021	slbp	81	58.095	Stegastes_partitus
ENSMODG00000004304	SLBP	98	77.519	ENSSSCG00000008676	SLBP	92	77.519	Sus_scrofa
ENSMODG00000004304	SLBP	98	73.256	ENSTGUG00000010626	-	98	71.705	Taeniopygia_guttata
ENSMODG00000004304	SLBP	90	52.344	ENSTRUG00000000688	slbp	71	57.843	Takifugu_rubripes
ENSMODG00000004304	SLBP	89	48.163	ENSTNIG00000000484	-	77	53.234	Tetraodon_nigroviridis
ENSMODG00000004304	SLBP	99	60.465	ENSTBEG00000004085	SLBP	99	60.465	Tupaia_belangeri
ENSMODG00000004304	SLBP	68	84.270	ENSTTRG00000004010	-	100	84.270	Tursiops_truncatus
ENSMODG00000004304	SLBP	83	87.963	ENSTTRG00000010901	-	100	87.963	Tursiops_truncatus
ENSMODG00000004304	SLBP	98	83.658	ENSUAMG00000012990	SLBP	91	83.658	Ursus_americanus
ENSMODG00000004304	SLBP	74	88.542	ENSUMAG00000006119	SLBP	100	88.542	Ursus_maritimus
ENSMODG00000004304	SLBP	100	79.310	ENSVVUG00000015578	-	93	79.310	Vulpes_vulpes
ENSMODG00000004304	SLBP	95	57.600	ENSXETG00000003876	slbp	92	59.761	Xenopus_tropicalis
ENSMODG00000004304	SLBP	78	57.075	ENSXCOG00000008275	slbp	76	57.767	Xiphophorus_couchianus
ENSMODG00000004304	SLBP	88	52.549	ENSXMAG00000001331	-	71	57.767	Xiphophorus_maculatus