EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000004368 (Gene tree)
Gene ID: 100022252
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 20539 bases
Position: chr6:234445969-234466507
Accession: 100022252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000005380	PolyA_pol	PF01743.20	1.6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000005497	TRNT1-201	2077	-	ENSMODP00000005380	434 (aa)	XP_001374161	F6W967

Gene Model

Click here to download ENSMODG00000004368's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000004368's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000004368	TRNT1	100	83.410	ENSG00000072756	TRNT1	100	83.410	Homo_sapiens
ENSMODG00000004368	TRNT1	96	64.623	ENSAPOG00000013687	trnt1	99	64.623	Acanthochromis_polyacanthus
ENSMODG00000004368	TRNT1	100	83.257	ENSAMEG00000014520	TRNT1	100	83.257	Ailuropoda_melanoleuca
ENSMODG00000004368	TRNT1	97	66.271	ENSACIG00000021706	trnt1	99	66.271	Amphilophus_citrinellus
ENSMODG00000004368	TRNT1	96	65.783	ENSAOCG00000024612	trnt1	97	65.783	Amphiprion_ocellaris
ENSMODG00000004368	TRNT1	94	58.722	ENSAPEG00000022627	trnt1	94	58.722	Amphiprion_percula
ENSMODG00000004368	TRNT1	93	68.734	ENSATEG00000008928	trnt1	99	68.734	Anabas_testudineus
ENSMODG00000004368	TRNT1	89	77.778	ENSAPLG00000004258	TRNT1	96	77.778	Anas_platyrhynchos
ENSMODG00000004368	TRNT1	99	74.246	ENSACAG00000005657	TRNT1	98	74.246	Anolis_carolinensis
ENSMODG00000004368	TRNT1	100	84.101	ENSANAG00000024802	TRNT1	100	84.101	Aotus_nancymaae
ENSMODG00000004368	TRNT1	95	66.908	ENSACLG00000022227	trnt1	97	66.908	Astatotilapia_calliptera
ENSMODG00000004368	TRNT1	100	65.596	ENSAMXG00000003960	trnt1	100	65.596	Astyanax_mexicanus
ENSMODG00000004368	TRNT1	100	82.258	ENSBTAG00000019534	TRNT1	100	82.258	Bos_taurus
ENSMODG00000004368	TRNT1	94	44.181	WBGene00010089	hpo-31	94	44.181	Caenorhabditis_elegans
ENSMODG00000004368	TRNT1	100	84.332	ENSCJAG00000015466	TRNT1	100	84.332	Callithrix_jacchus
ENSMODG00000004368	TRNT1	100	81.797	ENSCAFG00000005985	TRNT1	99	81.797	Canis_familiaris
ENSMODG00000004368	TRNT1	100	81.797	ENSCAFG00020014746	TRNT1	99	81.797	Canis_lupus_dingo
ENSMODG00000004368	TRNT1	100	82.488	ENSCHIG00000007030	TRNT1	99	82.488	Capra_hircus
ENSMODG00000004368	TRNT1	100	85.023	ENSTSYG00000013390	TRNT1	100	85.023	Carlito_syrichta
ENSMODG00000004368	TRNT1	87	68.966	ENSCAPG00000006891	TRNT1	99	68.966	Cavia_aperea
ENSMODG00000004368	TRNT1	99	84.065	ENSCPOG00000007849	TRNT1	100	84.328	Cavia_porcellus
ENSMODG00000004368	TRNT1	95	82.212	ENSCCAG00000002919	TRNT1	100	84.040	Cebus_capucinus
ENSMODG00000004368	TRNT1	99	84.758	ENSCATG00000031985	TRNT1	99	84.758	Cercocebus_atys
ENSMODG00000004368	TRNT1	99	85.219	ENSCLAG00000005186	TRNT1	99	85.219	Chinchilla_lanigera
ENSMODG00000004368	TRNT1	100	85.023	ENSCSAG00000011052	TRNT1	100	85.023	Chlorocebus_sabaeus
ENSMODG00000004368	TRNT1	85	87.129	ENSCHOG00000005712	TRNT1	85	87.129	Choloepus_hoffmanni
ENSMODG00000004368	TRNT1	96	81.205	ENSCPBG00000017636	TRNT1	95	81.205	Chrysemys_picta_bellii
ENSMODG00000004368	TRNT1	93	45.012	ENSCING00000007069	-	99	45.012	Ciona_intestinalis
ENSMODG00000004368	TRNT1	97	44.575	ENSCSAVG00000007494	-	99	44.575	Ciona_savignyi
ENSMODG00000004368	TRNT1	100	84.793	ENSCANG00000039030	TRNT1	100	84.793	Colobus_angolensis_palliatus
ENSMODG00000004368	TRNT1	100	83.180	ENSCGRG00001009998	Trnt1	100	83.180	Cricetulus_griseus_chok1gshd
ENSMODG00000004368	TRNT1	100	83.180	ENSCGRG00000013410	Trnt1	100	83.180	Cricetulus_griseus_crigri
ENSMODG00000004368	TRNT1	95	66.184	ENSCSEG00000008157	trnt1	97	66.184	Cynoglossus_semilaevis
ENSMODG00000004368	TRNT1	97	66.114	ENSCVAG00000019770	trnt1	99	66.114	Cyprinodon_variegatus
ENSMODG00000004368	TRNT1	97	68.483	ENSDARG00000075297	trnt1	97	68.483	Danio_rerio
ENSMODG00000004368	TRNT1	99	83.141	ENSDNOG00000008837	TRNT1	99	83.141	Dasypus_novemcinctus
ENSMODG00000004368	TRNT1	100	82.028	ENSDORG00000014035	Trnt1	100	82.028	Dipodomys_ordii
ENSMODG00000004368	TRNT1	92	48.515	FBgn0037369	CG2100	83	48.515	Drosophila_melanogaster
ENSMODG00000004368	TRNT1	57	83.936	ENSETEG00000018177	TRNT1	100	83.936	Echinops_telfairi
ENSMODG00000004368	TRNT1	93	63.457	ENSEBUG00000012779	-	95	63.457	Eptatretus_burgeri
ENSMODG00000004368	TRNT1	100	84.101	ENSEASG00005003577	TRNT1	100	84.101	Equus_asinus_asinus
ENSMODG00000004368	TRNT1	100	84.332	ENSECAG00000014420	TRNT1	100	84.332	Equus_caballus
ENSMODG00000004368	TRNT1	100	81.797	ENSEEUG00000009567	TRNT1	100	81.797	Erinaceus_europaeus
ENSMODG00000004368	TRNT1	97	68.009	ENSELUG00000003802	trnt1	98	68.009	Esox_lucius
ENSMODG00000004368	TRNT1	100	82.028	ENSFCAG00000026805	TRNT1	99	82.028	Felis_catus
ENSMODG00000004368	TRNT1	89	78.182	ENSFALG00000013539	TRNT1	100	78.182	Ficedula_albicollis
ENSMODG00000004368	TRNT1	99	84.065	ENSFDAG00000018412	TRNT1	100	83.582	Fukomys_damarensis
ENSMODG00000004368	TRNT1	96	65.485	ENSFHEG00000019294	trnt1	99	65.485	Fundulus_heteroclitus
ENSMODG00000004368	TRNT1	94	66.585	ENSGMOG00000007460	trnt1	96	66.585	Gadus_morhua
ENSMODG00000004368	TRNT1	94	75.369	ENSGALG00000017368	TRNT1	94	75.369	Gallus_gallus
ENSMODG00000004368	TRNT1	94	69.118	ENSGAFG00000008647	trnt1	96	69.118	Gambusia_affinis
ENSMODG00000004368	TRNT1	96	64.235	ENSGACG00000011903	trnt1	99	64.235	Gasterosteus_aculeatus
ENSMODG00000004368	TRNT1	96	81.250	ENSGAGG00000020942	TRNT1	95	81.250	Gopherus_agassizii
ENSMODG00000004368	TRNT1	100	83.641	ENSGGOG00000015286	TRNT1	100	83.641	Gorilla_gorilla
ENSMODG00000004368	TRNT1	95	66.908	ENSHBUG00000002797	trnt1	97	66.908	Haplochromis_burtoni
ENSMODG00000004368	TRNT1	99	83.372	ENSHGLG00000003649	TRNT1	99	83.372	Heterocephalus_glaber_female
ENSMODG00000004368	TRNT1	99	78.571	ENSHGLG00000000221	-	99	78.571	Heterocephalus_glaber_female
ENSMODG00000004368	TRNT1	99	82.448	ENSHGLG00100016421	TRNT1	99	82.448	Heterocephalus_glaber_male
ENSMODG00000004368	TRNT1	94	66.912	ENSHCOG00000010618	trnt1	96	66.912	Hippocampus_comes
ENSMODG00000004368	TRNT1	96	67.548	ENSIPUG00000000971	trnt1	97	67.548	Ictalurus_punctatus
ENSMODG00000004368	TRNT1	100	81.567	ENSSTOG00000000150	TRNT1	98	87.129	Ictidomys_tridecemlineatus
ENSMODG00000004368	TRNT1	100	83.410	ENSJJAG00000018561	Trnt1	99	83.410	Jaculus_jaculus
ENSMODG00000004368	TRNT1	96	65.802	ENSKMAG00000011307	trnt1	99	65.802	Kryptolebias_marmoratus
ENSMODG00000004368	TRNT1	92	63.409	ENSLBEG00000019457	trnt1	94	63.409	Labrus_bergylta
ENSMODG00000004368	TRNT1	96	74.217	ENSLACG00000013227	TRNT1	96	74.217	Latimeria_chalumnae
ENSMODG00000004368	TRNT1	97	70.546	ENSLOCG00000011105	trnt1	95	70.546	Lepisosteus_oculatus
ENSMODG00000004368	TRNT1	99	83.834	ENSLAFG00000023191	TRNT1	99	83.834	Loxodonta_africana
ENSMODG00000004368	TRNT1	99	84.988	ENSMFAG00000045113	TRNT1	99	84.988	Macaca_fascicularis
ENSMODG00000004368	TRNT1	99	84.988	ENSMMUG00000017983	TRNT1	99	84.988	Macaca_mulatta
ENSMODG00000004368	TRNT1	99	84.988	ENSMNEG00000037805	TRNT1	99	84.988	Macaca_nemestrina
ENSMODG00000004368	TRNT1	88	86.649	ENSMLEG00000033671	TRNT1	99	86.649	Mandrillus_leucophaeus
ENSMODG00000004368	TRNT1	96	66.988	ENSMAMG00000023401	trnt1	97	66.988	Mastacembelus_armatus
ENSMODG00000004368	TRNT1	95	66.908	ENSMZEG00005009141	trnt1	97	66.908	Maylandia_zebra
ENSMODG00000004368	TRNT1	74	76.636	ENSMGAG00000009971	TRNT1	100	76.636	Meleagris_gallopavo
ENSMODG00000004368	TRNT1	100	82.719	ENSMAUG00000020707	Trnt1	100	82.719	Mesocricetus_auratus
ENSMODG00000004368	TRNT1	99	84.527	ENSMICG00000016615	TRNT1	99	84.527	Microcebus_murinus
ENSMODG00000004368	TRNT1	100	83.180	ENSMOCG00000004539	Trnt1	100	83.180	Microtus_ochrogaster
ENSMODG00000004368	TRNT1	95	65.942	ENSMMOG00000010742	trnt1	97	65.942	Mola_mola
ENSMODG00000004368	TRNT1	97	65.957	ENSMALG00000008376	trnt1	98	65.957	Monopterus_albus
ENSMODG00000004368	TRNT1	99	83.721	MGP_CAROLIEiJ_G0028698	Trnt1	99	83.721	Mus_caroli
ENSMODG00000004368	TRNT1	99	83.953	ENSMUSG00000013736	Trnt1	99	83.953	Mus_musculus
ENSMODG00000004368	TRNT1	99	83.488	MGP_PahariEiJ_G0022449	Trnt1	98	86.432	Mus_pahari
ENSMODG00000004368	TRNT1	99	83.953	MGP_SPRETEiJ_G0029726	Trnt1	99	83.953	Mus_spretus
ENSMODG00000004368	TRNT1	100	82.488	ENSMPUG00000017017	TRNT1	99	82.488	Mustela_putorius_furo
ENSMODG00000004368	TRNT1	89	80.311	ENSMLUG00000011864	TRNT1	100	80.311	Myotis_lucifugus
ENSMODG00000004368	TRNT1	100	83.410	ENSNGAG00000000537	Trnt1	100	83.410	Nannospalax_galili
ENSMODG00000004368	TRNT1	77	65.868	ENSNBRG00000023606	trnt1	96	65.868	Neolamprologus_brichardi
ENSMODG00000004368	TRNT1	100	84.332	ENSNLEG00000003226	TRNT1	100	84.332	Nomascus_leucogenys
ENSMODG00000004368	TRNT1	100	93.548	ENSMEUG00000004684	TRNT1	100	93.548	Notamacropus_eugenii
ENSMODG00000004368	TRNT1	88	74.413	ENSOPRG00000015067	TRNT1	99	74.413	Ochotona_princeps
ENSMODG00000004368	TRNT1	99	83.141	ENSODEG00000007597	TRNT1	99	83.141	Octodon_degus
ENSMODG00000004368	TRNT1	95	66.667	ENSONIG00000020273	trnt1	96	66.667	Oreochromis_niloticus
ENSMODG00000004368	TRNT1	99	75.463	ENSOANG00000007514	TRNT1	99	75.463	Ornithorhynchus_anatinus
ENSMODG00000004368	TRNT1	100	78.802	ENSOCUG00000008580	TRNT1	99	78.802	Oryctolagus_cuniculus
ENSMODG00000004368	TRNT1	97	66.351	ENSORLG00000003165	trnt1	99	66.351	Oryzias_latipes
ENSMODG00000004368	TRNT1	97	66.588	ENSORLG00020022060	trnt1	99	66.588	Oryzias_latipes_hni
ENSMODG00000004368	TRNT1	97	65.877	ENSORLG00015018915	trnt1	99	65.877	Oryzias_latipes_hsok
ENSMODG00000004368	TRNT1	96	64.133	ENSOMEG00000003331	trnt1	99	64.133	Oryzias_melastigma
ENSMODG00000004368	TRNT1	100	82.488	ENSOARG00000008631	TRNT1	99	82.488	Ovis_aries
ENSMODG00000004368	TRNT1	100	83.641	ENSPPAG00000043566	TRNT1	100	83.641	Pan_paniscus
ENSMODG00000004368	TRNT1	100	82.258	ENSPPRG00000001327	TRNT1	99	82.258	Panthera_pardus
ENSMODG00000004368	TRNT1	100	82.028	ENSPTIG00000011448	TRNT1	99	82.028	Panthera_tigris_altaica
ENSMODG00000004368	TRNT1	100	83.641	ENSPTRG00000014564	TRNT1	100	83.641	Pan_troglodytes
ENSMODG00000004368	TRNT1	99	84.758	ENSPANG00000025944	TRNT1	99	84.758	Papio_anubis
ENSMODG00000004368	TRNT1	94	70.000	ENSPKIG00000020015	trnt1	95	70.000	Paramormyrops_kingsleyae
ENSMODG00000004368	TRNT1	91	80.856	ENSPSIG00000017356	TRNT1	99	82.451	Pelodiscus_sinensis
ENSMODG00000004368	TRNT1	95	67.391	ENSPMGG00000008888	trnt1	96	67.391	Periophthalmus_magnuspinnatus
ENSMODG00000004368	TRNT1	100	83.410	ENSPEMG00000019845	Trnt1	100	83.410	Peromyscus_maniculatus_bairdii
ENSMODG00000004368	TRNT1	100	95.392	ENSPCIG00000030436	TRNT1	100	95.392	Phascolarctos_cinereus
ENSMODG00000004368	TRNT1	94	68.627	ENSPFOG00000006194	trnt1	96	68.627	Poecilia_formosa
ENSMODG00000004368	TRNT1	94	68.627	ENSPLAG00000015623	trnt1	99	68.734	Poecilia_latipinna
ENSMODG00000004368	TRNT1	94	68.627	ENSPMEG00000012216	trnt1	99	68.734	Poecilia_mexicana
ENSMODG00000004368	TRNT1	94	68.293	ENSPREG00000021470	trnt1	96	68.293	Poecilia_reticulata
ENSMODG00000004368	TRNT1	100	84.332	ENSPPYG00000013702	TRNT1	100	84.332	Pongo_abelii
ENSMODG00000004368	TRNT1	88	83.290	ENSPCAG00000001951	TRNT1	100	83.290	Procavia_capensis
ENSMODG00000004368	TRNT1	99	84.758	ENSPCOG00000022228	TRNT1	99	84.758	Propithecus_coquereli
ENSMODG00000004368	TRNT1	88	82.812	ENSPVAG00000008784	TRNT1	100	82.812	Pteropus_vampyrus
ENSMODG00000004368	TRNT1	95	66.908	ENSPNYG00000003120	trnt1	97	66.908	Pundamilia_nyererei
ENSMODG00000004368	TRNT1	100	65.596	ENSPNAG00000000565	trnt1	100	65.596	Pygocentrus_nattereri
ENSMODG00000004368	TRNT1	99	83.953	ENSRNOG00000006432	Trnt1	99	83.953	Rattus_norvegicus
ENSMODG00000004368	TRNT1	100	82.949	ENSRBIG00000042632	TRNT1	100	82.949	Rhinopithecus_bieti
ENSMODG00000004368	TRNT1	100	84.332	ENSRROG00000036866	TRNT1	100	84.332	Rhinopithecus_roxellana
ENSMODG00000004368	TRNT1	100	84.101	ENSSBOG00000021208	TRNT1	100	84.101	Saimiri_boliviensis_boliviensis
ENSMODG00000004368	TRNT1	100	93.779	ENSSHAG00000018861	TRNT1	100	93.779	Sarcophilus_harrisii
ENSMODG00000004368	TRNT1	94	69.779	ENSSFOG00015020844	trnt1	94	69.779	Scleropages_formosus
ENSMODG00000004368	TRNT1	97	65.197	ENSSMAG00000015432	trnt1	99	65.197	Scophthalmus_maximus
ENSMODG00000004368	TRNT1	95	65.942	ENSSDUG00000012320	trnt1	97	65.942	Seriola_dumerili
ENSMODG00000004368	TRNT1	56	62.857	ENSSLDG00000016463	-	91	62.762	Seriola_lalandi_dorsalis
ENSMODG00000004368	TRNT1	95	65.942	ENSSLDG00000009325	trnt1	97	65.942	Seriola_lalandi_dorsalis
ENSMODG00000004368	TRNT1	88	80.469	ENSSPUG00000014153	TRNT1	100	80.469	Sphenodon_punctatus
ENSMODG00000004368	TRNT1	95	64.976	ENSSPAG00000021005	trnt1	97	64.976	Stegastes_partitus
ENSMODG00000004368	TRNT1	100	83.180	ENSSSCG00000011529	TRNT1	100	83.180	Sus_scrofa
ENSMODG00000004368	TRNT1	93	76.543	ENSTGUG00000010192	TRNT1	99	76.543	Taeniopygia_guttata
ENSMODG00000004368	TRNT1	96	67.470	ENSTRUG00000001088	trnt1	97	67.470	Takifugu_rubripes
ENSMODG00000004368	TRNT1	97	66.038	ENSTNIG00000007363	trnt1	98	66.038	Tetraodon_nigroviridis
ENSMODG00000004368	TRNT1	75	66.552	ENSTBEG00000006367	TRNT1	100	66.552	Tupaia_belangeri
ENSMODG00000004368	TRNT1	100	82.719	ENSTTRG00000007803	TRNT1	100	82.719	Tursiops_truncatus
ENSMODG00000004368	TRNT1	100	82.719	ENSUAMG00000022574	TRNT1	99	82.719	Ursus_americanus
ENSMODG00000004368	TRNT1	100	83.180	ENSUMAG00000024092	TRNT1	99	83.180	Ursus_maritimus
ENSMODG00000004368	TRNT1	100	81.797	ENSVVUG00000012810	TRNT1	99	81.797	Vulpes_vulpes
ENSMODG00000004368	TRNT1	95	65.385	ENSXETG00000025091	trnt1	99	66.418	Xenopus_tropicalis
ENSMODG00000004368	TRNT1	94	68.627	ENSXCOG00000010150	trnt1	96	68.627	Xiphophorus_couchianus
ENSMODG00000004368	TRNT1	94	68.137	ENSXMAG00000002227	trnt1	96	68.137	Xiphophorus_maculatus