EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000004444 (Gene tree)
Gene ID: 100010266
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 19381 bases
Position: chr1:452779720-452799100
Accession: 100010266
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000005474	PRP4	PF08799.11	3.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000005592	-	4440	-	ENSMODP00000005474	523 (aa)	XP_001362345	F6RSY7

Gene Model

Click here to download ENSMODG00000004444's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000004444's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000004444	-	56	31.737	ENSMODG00000016091	TBL3	66	31.944
ENSMODG00000004444	-	100	98.279	ENSMODG00000025096	-	97	98.279

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000004444	-	100	94.837	ENSG00000136875	PRPF4	100	94.837	Homo_sapiens
ENSMODG00000004444	-	97	77.131	ENSAPOG00000014132	prpf4	99	76.812	Acanthochromis_polyacanthus
ENSMODG00000004444	-	100	94.837	ENSAMEG00000013048	PRPF4	98	94.837	Ailuropoda_melanoleuca
ENSMODG00000004444	-	97	76.923	ENSACIG00000005579	prpf4	99	76.923	Amphilophus_citrinellus
ENSMODG00000004444	-	97	75.984	ENSAOCG00000005457	prpf4	99	75.686	Amphiprion_ocellaris
ENSMODG00000004444	-	97	75.787	ENSAPEG00000000776	prpf4	99	75.490	Amphiprion_percula
ENSMODG00000004444	-	97	76.331	ENSATEG00000023013	prpf4	99	76.031	Anabas_testudineus
ENSMODG00000004444	-	99	88.610	ENSAPLG00000006534	PRPF4	97	88.610	Anas_platyrhynchos
ENSMODG00000004444	-	100	89.333	ENSACAG00000015110	PRPF4	100	89.333	Anolis_carolinensis
ENSMODG00000004444	-	100	95.029	ENSANAG00000022464	PRPF4	96	95.029	Aotus_nancymaae
ENSMODG00000004444	-	97	75.937	ENSACLG00000019031	prpf4	99	75.937	Astatotilapia_calliptera
ENSMODG00000004444	-	97	62.572	ENSAMXG00000006756	prpf4	99	73.663	Astyanax_mexicanus
ENSMODG00000004444	-	100	94.455	ENSBTAG00000004571	PRPF4	100	94.455	Bos_taurus
ENSMODG00000004444	-	91	43.633	WBGene00007972	prp-4	96	43.633	Caenorhabditis_elegans
ENSMODG00000004444	-	100	94.847	ENSCJAG00000017856	PRPF4	100	94.847	Callithrix_jacchus
ENSMODG00000004444	-	100	94.837	ENSCAFG00000003224	PRPF4	97	94.837	Canis_familiaris
ENSMODG00000004444	-	100	94.837	ENSCAFG00020022637	PRPF4	100	94.837	Canis_lupus_dingo
ENSMODG00000004444	-	100	94.847	ENSCHIG00000024648	-	100	94.847	Capra_hircus
ENSMODG00000004444	-	100	94.837	ENSTSYG00000010366	PRPF4	100	94.837	Carlito_syrichta
ENSMODG00000004444	-	88	86.635	ENSCAPG00000008935	PRPF4	97	86.635	Cavia_aperea
ENSMODG00000004444	-	100	89.293	ENSCPOG00000014729	-	100	89.293	Cavia_porcellus
ENSMODG00000004444	-	100	94.646	ENSCPOG00000010747	-	100	94.646	Cavia_porcellus
ENSMODG00000004444	-	100	95.220	ENSCCAG00000028990	PRPF4	100	95.220	Cebus_capucinus
ENSMODG00000004444	-	100	95.029	ENSCATG00000021552	PRPF4	100	95.029	Cercocebus_atys
ENSMODG00000004444	-	100	94.837	ENSCLAG00000013448	PRPF4	100	94.837	Chinchilla_lanigera
ENSMODG00000004444	-	86	93.805	ENSCHOG00000007233	PRPF4	100	93.805	Choloepus_hoffmanni
ENSMODG00000004444	-	99	90.135	ENSCPBG00000019136	PRPF4	78	87.431	Chrysemys_picta_bellii
ENSMODG00000004444	-	94	60.161	ENSCING00000001299	-	95	59.514	Ciona_intestinalis
ENSMODG00000004444	-	97	57.339	ENSCSAVG00000009178	-	99	59.091	Ciona_savignyi
ENSMODG00000004444	-	100	94.837	ENSCANG00000003246	PRPF4	100	94.837	Colobus_angolensis_palliatus
ENSMODG00000004444	-	100	94.646	ENSCGRG00001016992	Prpf4	100	94.646	Cricetulus_griseus_chok1gshd
ENSMODG00000004444	-	100	94.646	ENSCGRG00000017560	Prpf4	100	94.646	Cricetulus_griseus_crigri
ENSMODG00000004444	-	97	75.050	ENSCSEG00000020451	prpf4	99	75.050	Cynoglossus_semilaevis
ENSMODG00000004444	-	97	79.604	ENSDARG00000067639	prpf4	99	79.604	Danio_rerio
ENSMODG00000004444	-	100	94.646	ENSDNOG00000013203	PRPF4	100	94.646	Dasypus_novemcinctus
ENSMODG00000004444	-	100	95.029	ENSDORG00000026275	Prpf4	100	95.029	Dipodomys_ordii
ENSMODG00000004444	-	87	55.799	FBgn0036733	U4-U6-60K	82	56.018	Drosophila_melanogaster
ENSMODG00000004444	-	100	93.499	ENSETEG00000020389	PRPF4	100	93.499	Echinops_telfairi
ENSMODG00000004444	-	97	71.493	ENSEBUG00000015229	prpf4	88	71.946	Eptatretus_burgeri
ENSMODG00000004444	-	100	95.029	ENSEASG00005022678	PRPF4	100	95.029	Equus_asinus_asinus
ENSMODG00000004444	-	100	95.029	ENSECAG00000007072	PRPF4	100	95.029	Equus_caballus
ENSMODG00000004444	-	100	75.217	ENSEEUG00000007480	PRPF4	100	75.217	Erinaceus_europaeus
ENSMODG00000004444	-	97	80.594	ENSELUG00000007510	prpf4	99	80.594	Esox_lucius
ENSMODG00000004444	-	100	94.847	ENSFCAG00000005514	PRPF4	100	94.847	Felis_catus
ENSMODG00000004444	-	97	87.416	ENSFALG00000005423	PRPF4	90	85.161	Ficedula_albicollis
ENSMODG00000004444	-	100	94.646	ENSFDAG00000005839	PRPF4	100	94.646	Fukomys_damarensis
ENSMODG00000004444	-	97	74.753	ENSFHEG00000001300	prpf4	99	74.753	Fundulus_heteroclitus
ENSMODG00000004444	-	98	89.432	ENSGALG00000008857	PRPF4	97	88.314	Gallus_gallus
ENSMODG00000004444	-	65	69.208	ENSGAFG00000012164	prpf4	70	69.208	Gambusia_affinis
ENSMODG00000004444	-	97	69.291	ENSGACG00000015476	prpf4	99	68.627	Gasterosteus_aculeatus
ENSMODG00000004444	-	100	86.876	ENSGAGG00000025029	PRPF4	100	86.876	Gopherus_agassizii
ENSMODG00000004444	-	100	94.837	ENSGGOG00000006943	PRPF4	100	94.837	Gorilla_gorilla
ENSMODG00000004444	-	97	75.740	ENSHBUG00000000562	prpf4	99	75.740	Haplochromis_burtoni
ENSMODG00000004444	-	100	76.482	ENSHGLG00000003838	-	100	76.482	Heterocephalus_glaber_female
ENSMODG00000004444	-	100	78.476	ENSHGLG00000016628	-	100	79.238	Heterocephalus_glaber_female
ENSMODG00000004444	-	100	94.646	ENSHGLG00000015191	PRPF4	100	94.646	Heterocephalus_glaber_female
ENSMODG00000004444	-	100	76.482	ENSHGLG00100005571	-	100	76.482	Heterocephalus_glaber_male
ENSMODG00000004444	-	97	78.416	ENSIPUG00000017956	PRPF4	99	77.822	Ictalurus_punctatus
ENSMODG00000004444	-	100	94.837	ENSSTOG00000027833	PRPF4	100	94.837	Ictidomys_tridecemlineatus
ENSMODG00000004444	-	100	95.220	ENSJJAG00000008838	Prpf4	100	95.220	Jaculus_jaculus
ENSMODG00000004444	-	97	75.542	ENSKMAG00000013236	prpf4	99	75.542	Kryptolebias_marmoratus
ENSMODG00000004444	-	97	75.446	ENSLBEG00000020611	prpf4	99	75.148	Labrus_bergylta
ENSMODG00000004444	-	97	80.784	ENSLACG00000016317	PRPF4	98	80.194	Latimeria_chalumnae
ENSMODG00000004444	-	96	81.400	ENSLOCG00000000581	prpf4	99	81.400	Lepisosteus_oculatus
ENSMODG00000004444	-	100	94.455	ENSLAFG00000018225	PRPF4	100	94.455	Loxodonta_africana
ENSMODG00000004444	-	100	94.837	ENSMFAG00000039397	PRPF4	100	94.837	Macaca_fascicularis
ENSMODG00000004444	-	100	94.837	ENSMMUG00000005844	PRPF4	100	95.029	Macaca_mulatta
ENSMODG00000004444	-	100	84.512	ENSMNEG00000033737	PRPF4	100	84.704	Macaca_nemestrina
ENSMODG00000004444	-	100	95.029	ENSMLEG00000040284	PRPF4	100	95.029	Mandrillus_leucophaeus
ENSMODG00000004444	-	97	75.740	ENSMAMG00000020141	prpf4	99	75.442	Mastacembelus_armatus
ENSMODG00000004444	-	97	75.937	ENSMZEG00005023205	prpf4	99	75.937	Maylandia_zebra
ENSMODG00000004444	-	99	87.548	ENSMGAG00000001796	PRPF4	97	87.548	Meleagris_gallopavo
ENSMODG00000004444	-	97	94.695	ENSMAUG00000018022	Prpf4	100	94.264	Mesocricetus_auratus
ENSMODG00000004444	-	100	93.893	ENSMICG00000015022	PRPF4	100	93.893	Microcebus_murinus
ENSMODG00000004444	-	100	94.073	ENSMOCG00000018273	Prpf4	100	94.073	Microtus_ochrogaster
ENSMODG00000004444	-	97	74.257	ENSMMOG00000021177	prpf4	99	73.964	Mola_mola
ENSMODG00000004444	-	97	76.134	ENSMALG00000013624	prpf4	99	75.835	Monopterus_albus
ENSMODG00000004444	-	100	94.455	MGP_CAROLIEiJ_G0026078	Prpf4	100	94.455	Mus_caroli
ENSMODG00000004444	-	100	94.455	ENSMUSG00000066148	Prpf4	100	94.455	Mus_musculus
ENSMODG00000004444	-	100	94.264	MGP_PahariEiJ_G0028413	Prpf4	100	94.264	Mus_pahari
ENSMODG00000004444	-	100	94.455	MGP_SPRETEiJ_G0027042	Prpf4	100	94.455	Mus_spretus
ENSMODG00000004444	-	100	94.837	ENSMPUG00000007883	PRPF4	100	94.837	Mustela_putorius_furo
ENSMODG00000004444	-	100	92.734	ENSMLUG00000008626	-	97	92.734	Myotis_lucifugus
ENSMODG00000004444	-	100	94.646	ENSMLUG00000015309	-	97	94.646	Myotis_lucifugus
ENSMODG00000004444	-	100	89.484	ENSNGAG00000000468	Prpf4	100	89.484	Nannospalax_galili
ENSMODG00000004444	-	97	76.134	ENSNBRG00000007972	prpf4	99	76.134	Neolamprologus_brichardi
ENSMODG00000004444	-	100	95.029	ENSNLEG00000016647	PRPF4	100	95.029	Nomascus_leucogenys
ENSMODG00000004444	-	98	98.833	ENSMEUG00000013256	PRPF4	100	98.833	Notamacropus_eugenii
ENSMODG00000004444	-	100	94.466	ENSOPRG00000005302	PRPF4	100	94.466	Ochotona_princeps
ENSMODG00000004444	-	100	95.029	ENSODEG00000018147	PRPF4	100	95.029	Octodon_degus
ENSMODG00000004444	-	98	75.097	ENSONIG00000012671	prpf4	99	75.937	Oreochromis_niloticus
ENSMODG00000004444	-	100	95.220	ENSOCUG00000005046	PRPF4	100	95.220	Oryctolagus_cuniculus
ENSMODG00000004444	-	97	74.653	ENSORLG00000019641	prpf4	99	74.359	Oryzias_latipes
ENSMODG00000004444	-	97	74.653	ENSORLG00020019438	prpf4	99	74.359	Oryzias_latipes_hni
ENSMODG00000004444	-	97	74.895	ENSOMEG00000020941	prpf4	99	74.583	Oryzias_melastigma
ENSMODG00000004444	-	100	90.440	ENSOGAG00000007802	PRPF4	98	90.440	Otolemur_garnettii
ENSMODG00000004444	-	100	95.029	ENSOARG00000006319	PRPF4	97	95.029	Ovis_aries
ENSMODG00000004444	-	100	94.837	ENSPPAG00000041797	PRPF4	100	94.837	Pan_paniscus
ENSMODG00000004444	-	100	95.029	ENSPPRG00000014360	PRPF4	100	95.029	Panthera_pardus
ENSMODG00000004444	-	100	95.029	ENSPTIG00000009574	PRPF4	100	95.029	Panthera_tigris_altaica
ENSMODG00000004444	-	100	94.837	ENSPTRG00000021274	PRPF4	100	94.656	Pan_troglodytes
ENSMODG00000004444	-	100	95.029	ENSPANG00000025776	PRPF4	96	95.029	Papio_anubis
ENSMODG00000004444	-	97	80.990	ENSPKIG00000017259	prpf4	99	80.990	Paramormyrops_kingsleyae
ENSMODG00000004444	-	98	90.411	ENSPSIG00000010713	PRPF4	90	90.411	Pelodiscus_sinensis
ENSMODG00000004444	-	99	57.609	ENSPMGG00000000997	prpf4	99	57.713	Periophthalmus_magnuspinnatus
ENSMODG00000004444	-	100	94.646	ENSPEMG00000024115	Prpf4	100	94.646	Peromyscus_maniculatus_bairdii
ENSMODG00000004444	-	98	98.833	ENSPCIG00000003821	PRPF4	99	98.833	Phascolarctos_cinereus
ENSMODG00000004444	-	97	68.689	ENSPFOG00000013524	prpf4	99	71.166	Poecilia_formosa
ENSMODG00000004444	-	62	70.336	ENSPLAG00000011620	prpf4	97	69.969	Poecilia_latipinna
ENSMODG00000004444	-	92	72.321	ENSPMEG00000006813	prpf4	99	72.321	Poecilia_mexicana
ENSMODG00000004444	-	98	95.331	ENSPCAG00000002561	PRPF4	99	95.331	Procavia_capensis
ENSMODG00000004444	-	97	95.285	ENSPCOG00000011975	PRPF4	100	94.837	Propithecus_coquereli
ENSMODG00000004444	-	100	91.031	ENSPVAG00000004708	PRPF4	100	91.031	Pteropus_vampyrus
ENSMODG00000004444	-	97	75.937	ENSPNYG00000008013	prpf4	99	75.937	Pundamilia_nyererei
ENSMODG00000004444	-	97	80.594	ENSPNAG00000000697	prpf4	99	80.000	Pygocentrus_nattereri
ENSMODG00000004444	-	100	94.646	ENSRNOG00000014777	Prpf4	100	94.646	Rattus_norvegicus
ENSMODG00000004444	-	100	94.837	ENSRBIG00000040221	PRPF4	100	94.837	Rhinopithecus_bieti
ENSMODG00000004444	-	100	94.837	ENSRROG00000040240	PRPF4	100	94.837	Rhinopithecus_roxellana
ENSMODG00000004444	-	100	99.044	ENSSHAG00000017658	PRPF4	100	99.044	Sarcophilus_harrisii
ENSMODG00000004444	-	96	82.600	ENSSFOG00015008963	prpf4	99	82.600	Scleropages_formosus
ENSMODG00000004444	-	97	74.853	ENSSMAG00000008889	prpf4	99	74.853	Scophthalmus_maximus
ENSMODG00000004444	-	97	72.584	ENSSDUG00000022083	prpf4	99	72.978	Seriola_dumerili
ENSMODG00000004444	-	97	72.781	ENSSLDG00000008115	prpf4	99	73.176	Seriola_lalandi_dorsalis
ENSMODG00000004444	-	100	89.484	ENSSPUG00000015582	PRPF4	100	89.484	Sphenodon_punctatus
ENSMODG00000004444	-	97	70.588	ENSSPAG00000011286	prpf4	99	70.312	Stegastes_partitus
ENSMODG00000004444	-	100	95.029	ENSSSCG00000024648	PRPF4	100	95.029	Sus_scrofa
ENSMODG00000004444	-	94	89.858	ENSTGUG00000002623	PRPF4	100	90.184	Taeniopygia_guttata
ENSMODG00000004444	-	96	75.050	ENSTRUG00000008853	prpf4	98	75.050	Takifugu_rubripes
ENSMODG00000004444	-	96	74.451	ENSTNIG00000013250	prpf4	99	74.451	Tetraodon_nigroviridis
ENSMODG00000004444	-	100	86.450	ENSTBEG00000000821	PRPF4	100	86.450	Tupaia_belangeri
ENSMODG00000004444	-	81	97.674	ENSTTRG00000003246	PRPF4	85	97.674	Tursiops_truncatus
ENSMODG00000004444	-	64	90.179	ENSUAMG00000018288	PRPF4	90	90.179	Ursus_americanus
ENSMODG00000004444	-	100	94.073	ENSUMAG00000019375	PRPF4	100	94.073	Ursus_maritimus
ENSMODG00000004444	-	100	94.656	ENSVPAG00000005281	PRPF4	100	94.656	Vicugna_pacos
ENSMODG00000004444	-	100	93.738	ENSVVUG00000002476	PRPF4	99	95.248	Vulpes_vulpes
ENSMODG00000004444	-	69	57.222	ENSXCOG00000006101	prpf4	93	58.128	Xiphophorus_couchianus
ENSMODG00000004444	-	88	62.771	ENSXMAG00000002750	prpf4	99	63.511	Xiphophorus_maculatus