EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000004511 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 10060 bases
Position: chr3:380607860-380617919
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000005566	EST1	PF10374.9	3.5e-10	1	1
ENSMODP00000005566	EST1_DNA_bind	PF10373.9	5.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000005685	-	2895	-	ENSMODP00000005566	964 (aa)	-	F6V972

Gene Model

Click here to download ENSMODG00000004511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000004511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000004511	-	100	89.610	ENSMODG00000010675	-	100	89.610
ENSMODG00000004511	-	87	33.220	ENSMODG00000016901	SMG5	95	33.484
ENSMODG00000004511	-	100	79.112	ENSMODG00000004532	-	97	79.896
ENSMODG00000004511	-	99	81.818	ENSMODG00000004735	-	100	81.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000004511	-	99	34.294	ENSG00000198952	SMG5	97	34.990	Homo_sapiens
ENSMODG00000004511	-	77	35.526	ENSAPOG00000019690	smg5	97	30.898	Acanthochromis_polyacanthus
ENSMODG00000004511	-	99	34.412	ENSAMEG00000014458	SMG5	99	34.612	Ailuropoda_melanoleuca
ENSMODG00000004511	-	77	35.751	ENSACIG00000001353	smg5	76	35.751	Amphilophus_citrinellus
ENSMODG00000004511	-	81	34.465	ENSAOCG00000019483	smg5	86	34.101	Amphiprion_ocellaris
ENSMODG00000004511	-	81	34.465	ENSAPEG00000022949	smg5	86	34.101	Amphiprion_percula
ENSMODG00000004511	-	77	35.492	ENSATEG00000005348	smg5	75	35.492	Anabas_testudineus
ENSMODG00000004511	-	99	34.069	ENSAPLG00000010263	SMG5	99	33.906	Anas_platyrhynchos
ENSMODG00000004511	-	99	34.022	ENSANAG00000032899	SMG5	98	34.748	Aotus_nancymaae
ENSMODG00000004511	-	79	34.699	ENSACLG00000009311	smg5	97	30.677	Astatotilapia_calliptera
ENSMODG00000004511	-	82	35.509	ENSAMXG00000024616	smg5	74	35.509	Astyanax_mexicanus
ENSMODG00000004511	-	99	35.154	ENSBTAG00000009435	SMG5	97	35.551	Bos_taurus
ENSMODG00000004511	-	99	32.533	ENSBTAG00000021747	-	96	32.967	Bos_taurus
ENSMODG00000004511	-	99	34.218	ENSCJAG00000005684	SMG5	97	34.946	Callithrix_jacchus
ENSMODG00000004511	-	99	33.762	ENSCAFG00000016839	SMG5	97	34.187	Canis_familiaris
ENSMODG00000004511	-	99	33.762	ENSCAFG00020006061	SMG5	97	34.187	Canis_lupus_dingo
ENSMODG00000004511	-	99	33.984	ENSCHIG00000007709	SMG5	97	34.946	Capra_hircus
ENSMODG00000004511	-	99	32.659	ENSCHIG00000006323	-	98	33.098	Capra_hircus
ENSMODG00000004511	-	99	34.390	ENSTSYG00000004099	SMG5	97	34.886	Carlito_syrichta
ENSMODG00000004511	-	99	34.154	ENSCPOG00000015696	SMG5	97	35.039	Cavia_porcellus
ENSMODG00000004511	-	99	34.053	ENSCCAG00000027409	SMG5	98	34.672	Cebus_capucinus
ENSMODG00000004511	-	99	34.195	ENSCATG00000030539	SMG5	97	34.990	Cercocebus_atys
ENSMODG00000004511	-	99	33.797	ENSCLAG00000003983	SMG5	97	34.623	Chinchilla_lanigera
ENSMODG00000004511	-	99	34.095	ENSCSAG00000002120	SMG5	97	34.891	Chlorocebus_sabaeus
ENSMODG00000004511	-	56	34.286	ENSCHOG00000008741	-	56	35.125	Choloepus_hoffmanni
ENSMODG00000004511	-	96	33.300	ENSCPBG00000025848	SMG5	99	34.066	Chrysemys_picta_bellii
ENSMODG00000004511	-	99	34.195	ENSCANG00000029208	SMG5	97	35.040	Colobus_angolensis_palliatus
ENSMODG00000004511	-	99	34.650	ENSCGRG00001006336	Smg5	97	35.108	Cricetulus_griseus_chok1gshd
ENSMODG00000004511	-	99	34.650	ENSCGRG00000005111	Smg5	99	35.108	Cricetulus_griseus_crigri
ENSMODG00000004511	-	81	35.248	ENSCSEG00000014220	smg5	97	32.020	Cynoglossus_semilaevis
ENSMODG00000004511	-	77	34.465	ENSCVAG00000000529	smg5	76	34.465	Cyprinodon_variegatus
ENSMODG00000004511	-	77	35.171	ENSDARG00000041481	smg5	69	35.171	Danio_rerio
ENSMODG00000004511	-	70	33.538	ENSDNOG00000039862	-	76	32.615	Dasypus_novemcinctus
ENSMODG00000004511	-	99	33.951	ENSDORG00000010382	Smg5	97	34.182	Dipodomys_ordii
ENSMODG00000004511	-	53	42.718	ENSETEG00000010336	SMG5	71	42.718	Echinops_telfairi
ENSMODG00000004511	-	76	39.733	ENSECAG00000001389	SMG5	97	34.592	Equus_caballus
ENSMODG00000004511	-	73	38.583	ENSEEUG00000012690	SMG5	73	38.802	Erinaceus_europaeus
ENSMODG00000004511	-	81	34.793	ENSELUG00000012585	smg5	97	30.739	Esox_lucius
ENSMODG00000004511	-	99	33.562	ENSFCAG00000011783	SMG5	97	34.156	Felis_catus
ENSMODG00000004511	-	99	34.752	ENSFDAG00000017388	SMG5	99	34.843	Fukomys_damarensis
ENSMODG00000004511	-	69	35.677	ENSFHEG00000013939	smg5	74	35.294	Fundulus_heteroclitus
ENSMODG00000004511	-	76	35.106	ENSGMOG00000007310	smg5	69	35.106	Gadus_morhua
ENSMODG00000004511	-	99	33.527	ENSGALG00000029918	-	98	33.560	Gallus_gallus
ENSMODG00000004511	-	72	34.615	ENSGAFG00000021691	smg5	70	34.615	Gambusia_affinis
ENSMODG00000004511	-	77	34.715	ENSGACG00000013142	smg5	74	34.715	Gasterosteus_aculeatus
ENSMODG00000004511	-	99	34.041	ENSGAGG00000016131	SMG5	97	34.006	Gopherus_agassizii
ENSMODG00000004511	-	99	34.195	ENSGGOG00000010932	SMG5	97	34.990	Gorilla_gorilla
ENSMODG00000004511	-	82	35.401	ENSHBUG00000008654	smg5	97	30.709	Haplochromis_burtoni
ENSMODG00000004511	-	99	34.322	ENSHGLG00000019152	SMG5	97	34.353	Heterocephalus_glaber_female
ENSMODG00000004511	-	90	33.698	ENSHGLG00100015948	SMG5	97	33.843	Heterocephalus_glaber_male
ENSMODG00000004511	-	73	33.813	ENSHCOG00000010229	smg5	78	33.333	Hippocampus_comes
ENSMODG00000004511	-	77	35.864	ENSIPUG00000006624	Smg5	69	35.171	Ictalurus_punctatus
ENSMODG00000004511	-	99	34.064	ENSSTOG00000001780	SMG5	97	35.394	Ictidomys_tridecemlineatus
ENSMODG00000004511	-	99	34.650	ENSJJAG00000022763	Smg5	97	34.950	Jaculus_jaculus
ENSMODG00000004511	-	80	34.272	ENSKMAG00000014586	smg5	74	33.681	Kryptolebias_marmoratus
ENSMODG00000004511	-	83	33.738	ENSLBEG00000002145	smg5	97	30.000	Labrus_bergylta
ENSMODG00000004511	-	83	35.657	ENSLACG00000010521	SMG5	97	31.655	Latimeria_chalumnae
ENSMODG00000004511	-	77	36.031	ENSLOCG00000008380	smg5	69	35.433	Lepisosteus_oculatus
ENSMODG00000004511	-	99	34.158	ENSLAFG00000006241	SMG5	97	34.387	Loxodonta_africana
ENSMODG00000004511	-	99	34.195	ENSMFAG00000045357	SMG5	97	34.990	Macaca_fascicularis
ENSMODG00000004511	-	99	34.328	ENSMMUG00000000090	SMG5	97	35.030	Macaca_mulatta
ENSMODG00000004511	-	99	34.095	ENSMNEG00000044425	SMG5	97	34.891	Macaca_nemestrina
ENSMODG00000004511	-	99	31.615	ENSMLEG00000041192	SMG5	97	32.438	Mandrillus_leucophaeus
ENSMODG00000004511	-	79	35.280	ENSMAMG00000010683	smg5	73	35.385	Mastacembelus_armatus
ENSMODG00000004511	-	99	34.863	ENSMAUG00000010381	Smg5	97	35.138	Mesocricetus_auratus
ENSMODG00000004511	-	99	33.927	ENSMICG00000002257	SMG5	97	34.558	Microcebus_murinus
ENSMODG00000004511	-	99	35.079	ENSMOCG00000016590	Smg5	97	35.595	Microtus_ochrogaster
ENSMODG00000004511	-	77	35.476	ENSMMOG00000017199	smg5	69	34.704	Mola_mola
ENSMODG00000004511	-	77	34.197	ENSMALG00000010375	smg5	69	34.197	Monopterus_albus
ENSMODG00000004511	-	99	34.442	MGP_CAROLIEiJ_G0025163	Smg5	98	38.857	Mus_caroli
ENSMODG00000004511	-	99	34.277	ENSMUSG00000001415	Smg5	97	38.857	Mus_musculus
ENSMODG00000004511	-	99	34.113	MGP_PahariEiJ_G0026606	Smg5	98	38.286	Mus_pahari
ENSMODG00000004511	-	99	34.375	MGP_SPRETEiJ_G0026104	Smg5	98	38.857	Mus_spretus
ENSMODG00000004511	-	99	34.347	ENSMLUG00000008518	SMG5	97	34.911	Myotis_lucifugus
ENSMODG00000004511	-	99	34.486	ENSNGAG00000020706	Smg5	97	35.074	Nannospalax_galili
ENSMODG00000004511	-	99	34.356	ENSNLEG00000012439	SMG5	97	35.089	Nomascus_leucogenys
ENSMODG00000004511	-	99	33.498	ENSMEUG00000012834	SMG5	97	34.055	Notamacropus_eugenii
ENSMODG00000004511	-	99	34.486	ENSOPRG00000009152	SMG5	97	34.916	Ochotona_princeps
ENSMODG00000004511	-	99	34.134	ENSODEG00000012237	SMG5	97	34.483	Octodon_degus
ENSMODG00000004511	-	79	34.699	ENSONIG00000008632	smg5	86	34.332	Oreochromis_niloticus
ENSMODG00000004511	-	90	31.403	ENSOCUG00000023338	-	97	31.312	Oryctolagus_cuniculus
ENSMODG00000004511	-	99	33.988	ENSOCUG00000012886	SMG5	99	34.791	Oryctolagus_cuniculus
ENSMODG00000004511	-	77	35.443	ENSORLG00000016239	smg5	69	35.825	Oryzias_latipes
ENSMODG00000004511	-	85	35.567	ENSORLG00020013127	smg5	97	30.831	Oryzias_latipes_hni
ENSMODG00000004511	-	77	35.567	ENSORLG00015019014	smg5	97	30.983	Oryzias_latipes_hsok
ENSMODG00000004511	-	60	36.104	ENSOMEG00000021330	smg5	64	33.562	Oryzias_melastigma
ENSMODG00000004511	-	99	34.064	ENSOGAG00000004966	SMG5	97	34.791	Otolemur_garnettii
ENSMODG00000004511	-	99	34.082	ENSOARG00000005778	SMG5	97	35.044	Ovis_aries
ENSMODG00000004511	-	99	32.828	ENSOARG00000011963	-	97	33.367	Ovis_aries
ENSMODG00000004511	-	99	34.158	ENSPPAG00000011996	SMG5	97	34.891	Pan_paniscus
ENSMODG00000004511	-	99	33.863	ENSPPRG00000011901	SMG5	99	34.394	Panthera_pardus
ENSMODG00000004511	-	99	34.257	ENSPTRG00000049282	-	97	34.990	Pan_troglodytes
ENSMODG00000004511	-	99	34.257	ENSPTRG00000023925	SMG5	97	34.990	Pan_troglodytes
ENSMODG00000004511	-	99	34.195	ENSPANG00000011201	SMG5	97	34.990	Papio_anubis
ENSMODG00000004511	-	99	30.943	ENSPKIG00000009402	smg5	97	31.232	Paramormyrops_kingsleyae
ENSMODG00000004511	-	99	34.185	ENSPSIG00000015198	SMG5	99	33.857	Pelodiscus_sinensis
ENSMODG00000004511	-	99	34.847	ENSPEMG00000001819	Smg5	97	35.509	Peromyscus_maniculatus_bairdii
ENSMODG00000004511	-	99	34.483	ENSPCIG00000018938	SMG5	97	34.642	Phascolarctos_cinereus
ENSMODG00000004511	-	76	35.467	ENSPFOG00000010191	smg5	72	35.467	Poecilia_formosa
ENSMODG00000004511	-	79	35.467	ENSPLAG00000009332	smg5	71	35.467	Poecilia_latipinna
ENSMODG00000004511	-	76	35.467	ENSPMEG00000014105	smg5	75	35.401	Poecilia_mexicana
ENSMODG00000004511	-	79	35.733	ENSPREG00000017713	smg5	71	35.733	Poecilia_reticulata
ENSMODG00000004511	-	99	34.294	ENSPPYG00000000723	SMG5	97	35.089	Pongo_abelii
ENSMODG00000004511	-	70	40.000	ENSPCAG00000008412	SMG5	74	40.000	Procavia_capensis
ENSMODG00000004511	-	99	34.257	ENSPCOG00000004741	SMG5	97	34.990	Propithecus_coquereli
ENSMODG00000004511	-	79	34.699	ENSPNYG00000013397	smg5	85	30.018	Pundamilia_nyererei
ENSMODG00000004511	-	77	35.079	ENSPNAG00000028363	smg5	70	35.079	Pygocentrus_nattereri
ENSMODG00000004511	-	99	34.283	ENSRNOG00000019590	Smg5	97	34.980	Rattus_norvegicus
ENSMODG00000004511	-	99	33.996	ENSRBIG00000027428	SMG5	97	34.791	Rhinopithecus_bieti
ENSMODG00000004511	-	99	34.095	ENSRROG00000030035	SMG5	97	34.891	Rhinopithecus_roxellana
ENSMODG00000004511	-	99	49.598	ENSSHAG00000000561	-	97	49.598	Sarcophilus_harrisii
ENSMODG00000004511	-	78	57.927	ENSSHAG00000000935	-	95	57.927	Sarcophilus_harrisii
ENSMODG00000004511	-	99	34.086	ENSSHAG00000014163	SMG5	99	34.149	Sarcophilus_harrisii
ENSMODG00000004511	-	78	36.364	ENSSFOG00015024175	smg5	97	30.732	Scleropages_formosus
ENSMODG00000004511	-	77	34.884	ENSSMAG00000013059	smg5	69	34.884	Scophthalmus_maximus
ENSMODG00000004511	-	80	34.204	ENSSDUG00000007122	smg5	68	34.527	Seriola_dumerili
ENSMODG00000004511	-	80	34.204	ENSSLDG00000011418	smg5	68	35.142	Seriola_lalandi_dorsalis
ENSMODG00000004511	-	68	38.129	ENSSARG00000012484	SMG5	82	38.129	Sorex_araneus
ENSMODG00000004511	-	96	34.171	ENSSPUG00000002260	SMG5	99	34.171	Sphenodon_punctatus
ENSMODG00000004511	-	81	34.204	ENSSPAG00000014266	smg5	97	30.647	Stegastes_partitus
ENSMODG00000004511	-	71	35.171	ENSSSCG00000039308	-	72	35.417	Sus_scrofa
ENSMODG00000004511	-	99	33.960	ENSSSCG00000006490	-	99	34.990	Sus_scrofa
ENSMODG00000004511	-	99	34.154	ENSTGUG00000003748	-	97	34.125	Taeniopygia_guttata
ENSMODG00000004511	-	92	34.694	ENSTRUG00000012580	smg5	97	31.213	Takifugu_rubripes
ENSMODG00000004511	-	99	30.929	ENSTNIG00000010303	smg5	97	30.929	Tetraodon_nigroviridis
ENSMODG00000004511	-	57	39.510	ENSTBEG00000002777	SMG5	56	39.362	Tupaia_belangeri
ENSMODG00000004511	-	96	33.537	ENSTTRG00000001401	SMG5	94	33.980	Tursiops_truncatus
ENSMODG00000004511	-	99	34.151	ENSUAMG00000013721	SMG5	97	34.838	Ursus_americanus
ENSMODG00000004511	-	99	33.905	ENSUMAG00000018041	SMG5	98	33.498	Ursus_maritimus
ENSMODG00000004511	-	95	41.500	ENSVPAG00000009446	SMG5	93	41.500	Vicugna_pacos
ENSMODG00000004511	-	99	33.663	ENSVVUG00000005887	SMG5	97	34.158	Vulpes_vulpes
ENSMODG00000004511	-	61	40.957	ENSXCOG00000004379	smg5	65	40.782	Xiphophorus_couchianus
ENSMODG00000004511	-	79	35.904	ENSXMAG00000013499	smg5	97	31.021	Xiphophorus_maculatus