EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000004521 (Gene tree)
Gene ID: 100019302
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 18454 bases
Position: chr4:274441979-274460432
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000005577	PseudoU_synth_2	PF00849.22	1.7e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000005696	RPUSD4-201	3078	-	ENSMODP00000005577	389 (aa)	-	F6UR33

Gene Model

Click here to download ENSMODG00000004521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000004521's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000004521	RPUSD4	52	30.806	ENSMODG00000016882	RPUSD1	63	30.806
ENSMODG00000004521	RPUSD4	54	33.333	ENSMODG00000005210	RPUSD3	67	32.463

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000004521	RPUSD4	84	75.229	ENSG00000165526	RPUSD4	87	75.229	Homo_sapiens
ENSMODG00000004521	RPUSD4	79	55.128	ENSAPOG00000011024	rpusd4	78	55.128	Acanthochromis_polyacanthus
ENSMODG00000004521	RPUSD4	84	74.924	ENSAMEG00000000127	-	87	74.924	Ailuropoda_melanoleuca
ENSMODG00000004521	RPUSD4	53	79.012	ENSAMEG00000005953	-	87	79.012	Ailuropoda_melanoleuca
ENSMODG00000004521	RPUSD4	80	51.724	ENSACIG00000003533	rpusd4	92	51.724	Amphilophus_citrinellus
ENSMODG00000004521	RPUSD4	81	54.375	ENSAOCG00000015409	rpusd4	79	54.375	Amphiprion_ocellaris
ENSMODG00000004521	RPUSD4	81	54.688	ENSAPEG00000018935	rpusd4	79	54.688	Amphiprion_percula
ENSMODG00000004521	RPUSD4	81	52.812	ENSATEG00000008059	rpusd4	79	52.812	Anabas_testudineus
ENSMODG00000004521	RPUSD4	68	64.906	ENSAPLG00000013250	RPUSD4	95	63.345	Anas_platyrhynchos
ENSMODG00000004521	RPUSD4	81	66.875	ENSACAG00000000189	RPUSD4	87	67.085	Anolis_carolinensis
ENSMODG00000004521	RPUSD4	89	73.699	ENSANAG00000024050	RPUSD4	93	73.699	Aotus_nancymaae
ENSMODG00000004521	RPUSD4	78	55.161	ENSACLG00000020996	rpusd4	79	55.161	Astatotilapia_calliptera
ENSMODG00000004521	RPUSD4	87	51.744	ENSAMXG00000031479	rpusd4	95	51.479	Astyanax_mexicanus
ENSMODG00000004521	RPUSD4	89	70.115	ENSBTAG00000020900	RPUSD4	92	70.115	Bos_taurus
ENSMODG00000004521	RPUSD4	89	73.121	ENSCJAG00000042850	RPUSD4	87	73.121	Callithrix_jacchus
ENSMODG00000004521	RPUSD4	84	76.147	ENSCAFG00000010488	RPUSD4	87	76.147	Canis_familiaris
ENSMODG00000004521	RPUSD4	84	76.147	ENSCAFG00020010621	RPUSD4	87	76.147	Canis_lupus_dingo
ENSMODG00000004521	RPUSD4	89	70.487	ENSCHIG00000009975	RPUSD4	92	70.487	Capra_hircus
ENSMODG00000004521	RPUSD4	89	72.543	ENSTSYG00000008456	RPUSD4	92	72.543	Carlito_syrichta
ENSMODG00000004521	RPUSD4	58	71.806	ENSCAPG00000006040	RPUSD4	88	71.806	Cavia_aperea
ENSMODG00000004521	RPUSD4	85	72.727	ENSCPOG00000014971	RPUSD4	87	72.727	Cavia_porcellus
ENSMODG00000004521	RPUSD4	89	74.277	ENSCCAG00000027838	RPUSD4	93	74.277	Cebus_capucinus
ENSMODG00000004521	RPUSD4	85	73.433	ENSCATG00000041570	RPUSD4	89	73.433	Cercocebus_atys
ENSMODG00000004521	RPUSD4	89	72.911	ENSCLAG00000016553	RPUSD4	92	72.911	Chinchilla_lanigera
ENSMODG00000004521	RPUSD4	84	75.229	ENSCSAG00000002274	RPUSD4	87	75.229	Chlorocebus_sabaeus
ENSMODG00000004521	RPUSD4	65	80.237	ENSCHOG00000010249	RPUSD4	89	80.237	Choloepus_hoffmanni
ENSMODG00000004521	RPUSD4	69	71.375	ENSCPBG00000011175	RPUSD4	93	71.375	Chrysemys_picta_bellii
ENSMODG00000004521	RPUSD4	65	44.615	ENSCSAVG00000000872	-	50	44.615	Ciona_savignyi
ENSMODG00000004521	RPUSD4	82	74.608	ENSCANG00000039684	RPUSD4	85	74.608	Colobus_angolensis_palliatus
ENSMODG00000004521	RPUSD4	84	74.540	ENSCGRG00001024141	Rpusd4	86	74.540	Cricetulus_griseus_chok1gshd
ENSMODG00000004521	RPUSD4	84	74.540	ENSCGRG00000014415	Rpusd4	86	74.540	Cricetulus_griseus_crigri
ENSMODG00000004521	RPUSD4	80	53.459	ENSCVAG00000008761	rpusd4	81	53.459	Cyprinodon_variegatus
ENSMODG00000004521	RPUSD4	80	53.774	ENSCVAG00000000392	rpusd4	90	53.774	Cyprinodon_variegatus
ENSMODG00000004521	RPUSD4	84	49.848	ENSDARG00000012674	rpusd4	92	49.848	Danio_rerio
ENSMODG00000004521	RPUSD4	84	73.394	ENSDNOG00000020026	RPUSD4	87	73.394	Dasypus_novemcinctus
ENSMODG00000004521	RPUSD4	89	72.334	ENSDORG00000016717	Rpusd4	92	72.334	Dipodomys_ordii
ENSMODG00000004521	RPUSD4	83	74.534	ENSETEG00000013953	RPUSD4	86	74.534	Echinops_telfairi
ENSMODG00000004521	RPUSD4	89	72.622	ENSEASG00005022982	RPUSD4	92	72.622	Equus_asinus_asinus
ENSMODG00000004521	RPUSD4	89	72.622	ENSECAG00000000557	RPUSD4	92	72.622	Equus_caballus
ENSMODG00000004521	RPUSD4	67	75.155	ENSEEUG00000014036	RPUSD4	69	75.155	Erinaceus_europaeus
ENSMODG00000004521	RPUSD4	79	56.563	ENSELUG00000008075	rpusd4	84	56.563	Esox_lucius
ENSMODG00000004521	RPUSD4	89	72.334	ENSFCAG00000029789	RPUSD4	92	72.334	Felis_catus
ENSMODG00000004521	RPUSD4	81	61.830	ENSFALG00000005171	RPUSD4	93	61.830	Ficedula_albicollis
ENSMODG00000004521	RPUSD4	83	76.235	ENSFDAG00000014307	RPUSD4	87	76.235	Fukomys_damarensis
ENSMODG00000004521	RPUSD4	83	51.534	ENSFHEG00000004329	rpusd4	84	51.534	Fundulus_heteroclitus
ENSMODG00000004521	RPUSD4	79	52.564	ENSGMOG00000017726	rpusd4	92	52.564	Gadus_morhua
ENSMODG00000004521	RPUSD4	68	66.415	ENSGALG00000024326	RPUSD4	94	58.944	Gallus_gallus
ENSMODG00000004521	RPUSD4	81	50.926	ENSGAFG00000021559	rpusd4	82	50.926	Gambusia_affinis
ENSMODG00000004521	RPUSD4	71	52.297	ENSGACG00000001657	rpusd4	91	51.331	Gasterosteus_aculeatus
ENSMODG00000004521	RPUSD4	85	64.970	ENSGAGG00000000132	RPUSD4	92	64.970	Gopherus_agassizii
ENSMODG00000004521	RPUSD4	84	75.305	ENSGGOG00000016494	RPUSD4	87	75.305	Gorilla_gorilla
ENSMODG00000004521	RPUSD4	78	55.161	ENSHBUG00000022838	rpusd4	79	55.161	Haplochromis_burtoni
ENSMODG00000004521	RPUSD4	89	71.676	ENSHGLG00000002285	RPUSD4	92	71.676	Heterocephalus_glaber_female
ENSMODG00000004521	RPUSD4	89	71.676	ENSHGLG00100006385	RPUSD4	92	71.676	Heterocephalus_glaber_male
ENSMODG00000004521	RPUSD4	79	53.035	ENSHCOG00000006612	rpusd4	79	53.035	Hippocampus_comes
ENSMODG00000004521	RPUSD4	79	55.449	ENSIPUG00000023879	rusd4	81	55.449	Ictalurus_punctatus
ENSMODG00000004521	RPUSD4	84	76.074	ENSSTOG00000025280	RPUSD4	90	76.074	Ictidomys_tridecemlineatus
ENSMODG00000004521	RPUSD4	84	74.847	ENSJJAG00000018673	Rpusd4	88	74.847	Jaculus_jaculus
ENSMODG00000004521	RPUSD4	79	54.167	ENSKMAG00000021805	rpusd4	81	54.167	Kryptolebias_marmoratus
ENSMODG00000004521	RPUSD4	84	51.351	ENSLBEG00000020394	rpusd4	92	51.351	Labrus_bergylta
ENSMODG00000004521	RPUSD4	80	64.856	ENSLACG00000011028	RPUSD4	79	64.856	Latimeria_chalumnae
ENSMODG00000004521	RPUSD4	79	47.419	ENSLOCG00000003124	rpusd4	82	47.419	Lepisosteus_oculatus
ENSMODG00000004521	RPUSD4	89	74.640	ENSLAFG00000005211	RPUSD4	92	74.640	Loxodonta_africana
ENSMODG00000004521	RPUSD4	85	74.030	ENSMFAG00000039513	RPUSD4	89	74.030	Macaca_fascicularis
ENSMODG00000004521	RPUSD4	85	73.731	ENSMMUG00000007933	RPUSD4	89	73.731	Macaca_mulatta
ENSMODG00000004521	RPUSD4	85	74.030	ENSMNEG00000027414	RPUSD4	89	74.030	Macaca_nemestrina
ENSMODG00000004521	RPUSD4	85	73.433	ENSMLEG00000042461	RPUSD4	89	73.433	Mandrillus_leucophaeus
ENSMODG00000004521	RPUSD4	79	51.746	ENSMAMG00000023839	rpusd4	81	51.746	Mastacembelus_armatus
ENSMODG00000004521	RPUSD4	78	55.161	ENSMZEG00005011999	rpusd4	79	55.161	Maylandia_zebra
ENSMODG00000004521	RPUSD4	77	60.726	ENSMGAG00000000840	RPUSD4	94	60.912	Meleagris_gallopavo
ENSMODG00000004521	RPUSD4	84	74.847	ENSMAUG00000010280	Rpusd4	86	74.847	Mesocricetus_auratus
ENSMODG00000004521	RPUSD4	89	72.046	ENSMICG00000015979	RPUSD4	85	79.359	Microcebus_murinus
ENSMODG00000004521	RPUSD4	84	73.006	ENSMOCG00000000661	Rpusd4	86	73.006	Microtus_ochrogaster
ENSMODG00000004521	RPUSD4	76	55.518	ENSMMOG00000021731	rpusd4	88	55.518	Mola_mola
ENSMODG00000004521	RPUSD4	73	55.172	ENSMALG00000005839	rpusd4	92	54.072	Monopterus_albus
ENSMODG00000004521	RPUSD4	84	74.847	MGP_CAROLIEiJ_G0031954	Rpusd4	86	74.847	Mus_caroli
ENSMODG00000004521	RPUSD4	84	74.540	ENSMUSG00000032044	Rpusd4	86	74.540	Mus_musculus
ENSMODG00000004521	RPUSD4	84	75.153	MGP_PahariEiJ_G0014819	Rpusd4	86	75.153	Mus_pahari
ENSMODG00000004521	RPUSD4	84	74.847	MGP_SPRETEiJ_G0033078	Rpusd4	86	74.847	Mus_spretus
ENSMODG00000004521	RPUSD4	87	71.470	ENSMPUG00000006608	RPUSD4	92	71.470	Mustela_putorius_furo
ENSMODG00000004521	RPUSD4	61	76.793	ENSMLUG00000029348	-	93	76.793	Myotis_lucifugus
ENSMODG00000004521	RPUSD4	83	75.851	ENSMLUG00000017328	-	92	72.701	Myotis_lucifugus
ENSMODG00000004521	RPUSD4	84	75.841	ENSNGAG00000020847	Rpusd4	87	75.841	Nannospalax_galili
ENSMODG00000004521	RPUSD4	78	55.161	ENSNBRG00000005207	rpusd4	89	55.161	Neolamprologus_brichardi
ENSMODG00000004521	RPUSD4	89	72.622	ENSNLEG00000007465	RPUSD4	92	72.622	Nomascus_leucogenys
ENSMODG00000004521	RPUSD4	89	86.167	ENSMEUG00000004370	RPUSD4	94	86.167	Notamacropus_eugenii
ENSMODG00000004521	RPUSD4	68	50.566	ENSOPRG00000013141	-	100	50.566	Ochotona_princeps
ENSMODG00000004521	RPUSD4	89	72.334	ENSODEG00000004577	RPUSD4	92	72.334	Octodon_degus
ENSMODG00000004521	RPUSD4	85	54.734	ENSONIG00000018879	rpusd4	90	54.734	Oreochromis_niloticus
ENSMODG00000004521	RPUSD4	71	72.043	ENSOANG00000007247	RPUSD4	89	72.043	Ornithorhynchus_anatinus
ENSMODG00000004521	RPUSD4	83	75.617	ENSOCUG00000017039	RPUSD4	86	75.617	Oryctolagus_cuniculus
ENSMODG00000004521	RPUSD4	81	48.598	ENSORLG00000002750	rpusd4	87	48.598	Oryzias_latipes
ENSMODG00000004521	RPUSD4	79	49.359	ENSORLG00020002044	rpusd4	77	49.359	Oryzias_latipes_hni
ENSMODG00000004521	RPUSD4	71	51.957	ENSORLG00015020034	rpusd4	70	51.957	Oryzias_latipes_hsok
ENSMODG00000004521	RPUSD4	79	51.923	ENSOMEG00000004861	rpusd4	76	51.923	Oryzias_melastigma
ENSMODG00000004521	RPUSD4	83	75.926	ENSOGAG00000008922	RPUSD4	86	75.926	Otolemur_garnettii
ENSMODG00000004521	RPUSD4	84	73.556	ENSOARG00000012238	RPUSD4	87	73.556	Ovis_aries
ENSMODG00000004521	RPUSD4	84	75.535	ENSPPAG00000042883	RPUSD4	81	75.535	Pan_paniscus
ENSMODG00000004521	RPUSD4	89	72.622	ENSPPRG00000003081	RPUSD4	92	72.622	Panthera_pardus
ENSMODG00000004521	RPUSD4	89	72.622	ENSPTIG00000012059	RPUSD4	92	72.622	Panthera_tigris_altaica
ENSMODG00000004521	RPUSD4	84	75.535	ENSPTRG00000004454	RPUSD4	87	75.535	Pan_troglodytes
ENSMODG00000004521	RPUSD4	84	74.312	ENSPANG00000015040	RPUSD4	87	74.312	Papio_anubis
ENSMODG00000004521	RPUSD4	81	59.688	ENSPKIG00000023986	rpusd4	81	59.688	Paramormyrops_kingsleyae
ENSMODG00000004521	RPUSD4	72	68.310	ENSPSIG00000014268	RPUSD4	90	68.310	Pelodiscus_sinensis
ENSMODG00000004521	RPUSD4	79	51.438	ENSPMGG00000002806	rpusd4	86	51.282	Periophthalmus_magnuspinnatus
ENSMODG00000004521	RPUSD4	84	69.113	ENSPEMG00000000278	Rpusd4	86	69.113	Peromyscus_maniculatus_bairdii
ENSMODG00000004521	RPUSD4	74	44.410	ENSPMAG00000008183	rpusd4	93	44.410	Petromyzon_marinus
ENSMODG00000004521	RPUSD4	89	87.320	ENSPCIG00000010212	RPUSD4	95	87.320	Phascolarctos_cinereus
ENSMODG00000004521	RPUSD4	81	51.682	ENSPFOG00000019030	rpusd4	85	51.682	Poecilia_formosa
ENSMODG00000004521	RPUSD4	81	52.308	ENSPLAG00000016848	rpusd4	82	52.308	Poecilia_latipinna
ENSMODG00000004521	RPUSD4	81	51.385	ENSPMEG00000017534	rpusd4	83	51.385	Poecilia_mexicana
ENSMODG00000004521	RPUSD4	84	50.149	ENSPREG00000005689	rpusd4	86	50.149	Poecilia_reticulata
ENSMODG00000004521	RPUSD4	84	75.305	ENSPPYG00000004043	RPUSD4	87	75.305	Pongo_abelii
ENSMODG00000004521	RPUSD4	67	72.500	ENSPCAG00000000753	RPUSD4	70	72.500	Procavia_capensis
ENSMODG00000004521	RPUSD4	89	65.418	ENSPCOG00000020694	RPUSD4	93	65.418	Propithecus_coquereli
ENSMODG00000004521	RPUSD4	87	72.254	ENSPVAG00000000988	RPUSD4	93	72.254	Pteropus_vampyrus
ENSMODG00000004521	RPUSD4	78	55.161	ENSPNYG00000009652	rpusd4	79	55.161	Pundamilia_nyererei
ENSMODG00000004521	RPUSD4	85	52.994	ENSPNAG00000012264	rpusd4	88	52.994	Pygocentrus_nattereri
ENSMODG00000004521	RPUSD4	84	74.847	ENSRNOG00000011567	Rpusd4	86	74.847	Rattus_norvegicus
ENSMODG00000004521	RPUSD4	89	71.676	ENSRBIG00000034842	RPUSD4	92	71.676	Rhinopithecus_bieti
ENSMODG00000004521	RPUSD4	89	71.676	ENSRROG00000039753	RPUSD4	92	71.676	Rhinopithecus_roxellana
ENSMODG00000004521	RPUSD4	89	74.566	ENSSBOG00000030413	RPUSD4	93	74.566	Saimiri_boliviensis_boliviensis
ENSMODG00000004521	RPUSD4	73	87.324	ENSSHAG00000008304	RPUSD4	94	87.324	Sarcophilus_harrisii
ENSMODG00000004521	RPUSD4	81	58.204	ENSSFOG00015006203	rpusd4	87	58.385	Scleropages_formosus
ENSMODG00000004521	RPUSD4	82	52.000	ENSSMAG00000020978	rpusd4	86	52.000	Scophthalmus_maximus
ENSMODG00000004521	RPUSD4	79	51.768	ENSSDUG00000013399	rpusd4	81	51.768	Seriola_dumerili
ENSMODG00000004521	RPUSD4	79	52.090	ENSSLDG00000023507	rpusd4	81	52.090	Seriola_lalandi_dorsalis
ENSMODG00000004521	RPUSD4	83	64.615	ENSSPUG00000001401	RPUSD4	89	65.231	Sphenodon_punctatus
ENSMODG00000004521	RPUSD4	81	54.375	ENSSPAG00000012163	rpusd4	82	54.375	Stegastes_partitus
ENSMODG00000004521	RPUSD4	84	75.229	ENSSSCG00000015233	RPUSD4	87	75.229	Sus_scrofa
ENSMODG00000004521	RPUSD4	73	64.561	ENSTGUG00000000773	RPUSD4	95	64.561	Taeniopygia_guttata
ENSMODG00000004521	RPUSD4	80	51.097	ENSTRUG00000012283	rpusd4	81	51.097	Takifugu_rubripes
ENSMODG00000004521	RPUSD4	79	50.641	ENSTNIG00000014676	rpusd4	79	50.641	Tetraodon_nigroviridis
ENSMODG00000004521	RPUSD4	89	72.334	ENSTTRG00000001555	RPUSD4	92	72.334	Tursiops_truncatus
ENSMODG00000004521	RPUSD4	83	75.926	ENSUMAG00000002219	RPUSD4	86	75.926	Ursus_maritimus
ENSMODG00000004521	RPUSD4	63	75.918	ENSVPAG00000001066	RPUSD4	92	75.918	Vicugna_pacos
ENSMODG00000004521	RPUSD4	84	76.453	ENSVVUG00000020101	RPUSD4	87	76.453	Vulpes_vulpes
ENSMODG00000004521	RPUSD4	80	52.795	ENSXCOG00000004676	rpusd4	84	52.484	Xiphophorus_couchianus
ENSMODG00000004521	RPUSD4	80	52.795	ENSXMAG00000023351	rpusd4	82	52.795	Xiphophorus_maculatus