EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000004532 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 2778 bases
Position: chr3:380082860-380085637
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000005591	EST1	PF10374.9	6.1e-08	1	1
ENSMODP00000005591	EST1_DNA_bind	PF10373.9	2.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000005710	-	2586	-	ENSMODP00000005591	861 (aa)	-	F6U9C7

Gene Model

Click here to download ENSMODG00000004532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000004532's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000004532	-	97	79.896	ENSMODG00000004511	-	100	79.112
ENSMODG00000004532	-	73	38.442	ENSMODG00000016901	SMG5	74	38.346
ENSMODG00000004532	-	97	78.670	ENSMODG00000010675	-	100	78.326
ENSMODG00000004532	-	96	76.914	ENSMODG00000004735	-	100	76.566

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000004532	-	83	37.940	ENSG00000198952	SMG5	93	37.317	Homo_sapiens
ENSMODG00000004532	-	87	35.338	ENSAPOG00000019690	smg5	80	35.338	Acanthochromis_polyacanthus
ENSMODG00000004532	-	81	39.050	ENSAMEG00000014458	SMG5	94	37.317	Ailuropoda_melanoleuca
ENSMODG00000004532	-	85	35.149	ENSACIG00000001353	smg5	77	35.149	Amphilophus_citrinellus
ENSMODG00000004532	-	91	33.850	ENSAOCG00000019483	smg5	77	35.677	Amphiprion_ocellaris
ENSMODG00000004532	-	91	33.850	ENSAPEG00000022949	smg5	79	35.677	Amphiprion_percula
ENSMODG00000004532	-	87	35.000	ENSATEG00000005348	smg5	77	34.901	Anabas_testudineus
ENSMODG00000004532	-	96	36.098	ENSAPLG00000010263	SMG5	89	35.992	Anas_platyrhynchos
ENSMODG00000004532	-	83	37.940	ENSANAG00000032899	SMG5	93	37.073	Aotus_nancymaae
ENSMODG00000004532	-	89	34.411	ENSACLG00000009311	smg5	79	35.062	Astatotilapia_calliptera
ENSMODG00000004532	-	95	31.733	ENSAMXG00000024616	smg5	77	32.832	Astyanax_mexicanus
ENSMODG00000004532	-	83	38.211	ENSBTAG00000009435	SMG5	86	46.409	Bos_taurus
ENSMODG00000004532	-	80	38.992	ENSBTAG00000021747	-	75	38.992	Bos_taurus
ENSMODG00000004532	-	83	37.940	ENSCJAG00000005684	SMG5	93	36.829	Callithrix_jacchus
ENSMODG00000004532	-	83	38.133	ENSCAFG00000016839	SMG5	93	37.221	Canis_familiaris
ENSMODG00000004532	-	83	38.133	ENSCAFG00020006061	SMG5	93	37.221	Canis_lupus_dingo
ENSMODG00000004532	-	80	38.992	ENSCHIG00000006323	-	75	38.992	Capra_hircus
ENSMODG00000004532	-	87	37.867	ENSCHIG00000007709	SMG5	93	36.585	Capra_hircus
ENSMODG00000004532	-	83	37.940	ENSTSYG00000004099	SMG5	82	37.317	Carlito_syrichta
ENSMODG00000004532	-	67	33.867	ENSCAPG00000003631	SMG5	76	32.426	Cavia_aperea
ENSMODG00000004532	-	83	37.940	ENSCPOG00000015696	SMG5	81	37.805	Cavia_porcellus
ENSMODG00000004532	-	83	37.940	ENSCCAG00000027409	SMG5	93	37.073	Cebus_capucinus
ENSMODG00000004532	-	83	37.940	ENSCATG00000030539	SMG5	93	37.317	Cercocebus_atys
ENSMODG00000004532	-	83	37.940	ENSCLAG00000003983	SMG5	82	37.317	Chinchilla_lanigera
ENSMODG00000004532	-	83	37.940	ENSCSAG00000002120	SMG5	93	37.073	Chlorocebus_sabaeus
ENSMODG00000004532	-	83	38.083	ENSCPBG00000025848	SMG5	78	38.083	Chrysemys_picta_bellii
ENSMODG00000004532	-	57	34.028	ENSCING00000008706	-	50	40.187	Ciona_intestinalis
ENSMODG00000004532	-	83	40.698	ENSCANG00000029208	SMG5	93	40.369	Colobus_angolensis_palliatus
ENSMODG00000004532	-	83	38.933	ENSCGRG00001006336	Smg5	93	39.024	Cricetulus_griseus_chok1gshd
ENSMODG00000004532	-	81	38.933	ENSCGRG00000005111	Smg5	94	39.024	Cricetulus_griseus_crigri
ENSMODG00000004532	-	86	35.396	ENSCSEG00000014220	smg5	78	35.396	Cynoglossus_semilaevis
ENSMODG00000004532	-	85	32.481	ENSCVAG00000000529	smg5	79	31.969	Cyprinodon_variegatus
ENSMODG00000004532	-	86	34.837	ENSDARG00000041481	smg5	72	35.500	Danio_rerio
ENSMODG00000004532	-	91	30.145	ENSDNOG00000039862	-	89	30.556	Dasypus_novemcinctus
ENSMODG00000004532	-	80	38.147	ENSDNOG00000000051	SMG5	88	38.213	Dasypus_novemcinctus
ENSMODG00000004532	-	83	37.940	ENSDORG00000010382	Smg5	78	37.940	Dipodomys_ordii
ENSMODG00000004532	-	62	42.718	ENSETEG00000010336	SMG5	56	44.681	Echinops_telfairi
ENSMODG00000004532	-	83	38.500	ENSEASG00005019122	SMG5	82	37.986	Equus_asinus_asinus
ENSMODG00000004532	-	83	38.500	ENSECAG00000001389	SMG5	91	36.829	Equus_caballus
ENSMODG00000004532	-	78	39.181	ENSEEUG00000012690	SMG5	74	39.181	Erinaceus_europaeus
ENSMODG00000004532	-	90	34.499	ENSELUG00000012585	smg5	73	44.242	Esox_lucius
ENSMODG00000004532	-	87	36.806	ENSFCAG00000011783	SMG5	93	37.376	Felis_catus
ENSMODG00000004532	-	84	37.600	ENSFDAG00000017388	SMG5	81	37.717	Fukomys_damarensis
ENSMODG00000004532	-	66	40.500	ENSFHEG00000013939	smg5	61	40.838	Fundulus_heteroclitus
ENSMODG00000004532	-	86	33.333	ENSGMOG00000007310	smg5	72	33.573	Gadus_morhua
ENSMODG00000004532	-	98	35.526	ENSGALG00000029918	-	88	36.187	Gallus_gallus
ENSMODG00000004532	-	72	40.000	ENSGAFG00000021691	smg5	59	41.530	Gambusia_affinis
ENSMODG00000004532	-	86	35.222	ENSGACG00000013142	smg5	77	34.000	Gasterosteus_aculeatus
ENSMODG00000004532	-	90	37.528	ENSGAGG00000016131	SMG5	78	37.528	Gopherus_agassizii
ENSMODG00000004532	-	83	37.940	ENSGGOG00000010932	SMG5	93	37.073	Gorilla_gorilla
ENSMODG00000004532	-	89	34.411	ENSHBUG00000008654	smg5	77	35.062	Haplochromis_burtoni
ENSMODG00000004532	-	87	37.067	ENSHGLG00000019152	SMG5	92	36.098	Heterocephalus_glaber_female
ENSMODG00000004532	-	76	36.195	ENSHGLG00100015948	SMG5	91	34.185	Heterocephalus_glaber_male
ENSMODG00000004532	-	71	36.634	ENSHCOG00000010229	smg5	64	36.788	Hippocampus_comes
ENSMODG00000004532	-	86	35.250	ENSIPUG00000006624	Smg5	72	34.750	Ictalurus_punctatus
ENSMODG00000004532	-	83	38.191	ENSSTOG00000001780	SMG5	93	38.049	Ictidomys_tridecemlineatus
ENSMODG00000004532	-	91	37.561	ENSJJAG00000022763	Smg5	81	38.049	Jaculus_jaculus
ENSMODG00000004532	-	90	34.234	ENSKMAG00000014586	smg5	77	32.193	Kryptolebias_marmoratus
ENSMODG00000004532	-	89	34.186	ENSLBEG00000002145	smg5	83	34.419	Labrus_bergylta
ENSMODG00000004532	-	87	33.661	ENSLACG00000010521	SMG5	76	33.661	Latimeria_chalumnae
ENSMODG00000004532	-	89	34.793	ENSLOCG00000008380	smg5	69	37.349	Lepisosteus_oculatus
ENSMODG00000004532	-	83	38.191	ENSLAFG00000006241	SMG5	92	37.468	Loxodonta_africana
ENSMODG00000004532	-	83	37.940	ENSMFAG00000045357	SMG5	93	37.317	Macaca_fascicularis
ENSMODG00000004532	-	83	37.940	ENSMMUG00000000090	SMG5	93	37.317	Macaca_mulatta
ENSMODG00000004532	-	83	37.940	ENSMNEG00000044425	SMG5	93	37.073	Macaca_nemestrina
ENSMODG00000004532	-	83	35.092	ENSMLEG00000041192	SMG5	93	34.474	Mandrillus_leucophaeus
ENSMODG00000004532	-	83	35.222	ENSMAMG00000010683	smg5	74	35.897	Mastacembelus_armatus
ENSMODG00000004532	-	88	35.062	ENSMZEG00005015815	smg5	79	35.062	Maylandia_zebra
ENSMODG00000004532	-	87	38.049	ENSMAUG00000010381	Smg5	81	38.537	Mesocricetus_auratus
ENSMODG00000004532	-	83	37.940	ENSMICG00000002257	SMG5	93	37.317	Microcebus_murinus
ENSMODG00000004532	-	83	38.400	ENSMOCG00000016590	Smg5	81	38.537	Microtus_ochrogaster
ENSMODG00000004532	-	85	34.398	ENSMMOG00000017199	smg5	71	34.398	Mola_mola
ENSMODG00000004532	-	95	33.264	ENSMALG00000010375	smg5	76	33.264	Monopterus_albus
ENSMODG00000004532	-	92	37.805	MGP_CAROLIEiJ_G0025163	Smg5	98	39.429	Mus_caroli
ENSMODG00000004532	-	92	37.561	ENSMUSG00000001415	Smg5	97	39.429	Mus_musculus
ENSMODG00000004532	-	92	37.561	MGP_PahariEiJ_G0026606	Smg5	98	38.857	Mus_pahari
ENSMODG00000004532	-	92	37.805	MGP_SPRETEiJ_G0026104	Smg5	98	39.429	Mus_spretus
ENSMODG00000004532	-	77	38.416	ENSMPUG00000004546	SMG5	79	38.416	Mustela_putorius_furo
ENSMODG00000004532	-	83	37.688	ENSMLUG00000008518	SMG5	93	37.317	Myotis_lucifugus
ENSMODG00000004532	-	82	40.053	ENSNGAG00000012101	-	77	40.053	Nannospalax_galili
ENSMODG00000004532	-	84	38.583	ENSNGAG00000020706	Smg5	83	38.537	Nannospalax_galili
ENSMODG00000004532	-	83	35.062	ENSNBRG00000004332	smg5	68	40.132	Neolamprologus_brichardi
ENSMODG00000004532	-	83	37.940	ENSNLEG00000012439	SMG5	93	37.317	Nomascus_leucogenys
ENSMODG00000004532	-	86	38.442	ENSMEUG00000012834	SMG5	78	38.346	Notamacropus_eugenii
ENSMODG00000004532	-	84	38.320	ENSOPRG00000009152	SMG5	92	37.563	Ochotona_princeps
ENSMODG00000004532	-	83	37.940	ENSODEG00000012237	SMG5	81	37.317	Octodon_degus
ENSMODG00000004532	-	89	34.411	ENSONIG00000008632	smg5	75	34.071	Oreochromis_niloticus
ENSMODG00000004532	-	71	35.806	ENSOCUG00000023338	-	74	35.806	Oryctolagus_cuniculus
ENSMODG00000004532	-	82	38.992	ENSOCUG00000012886	SMG5	94	37.317	Oryctolagus_cuniculus
ENSMODG00000004532	-	84	34.975	ENSORLG00000016239	smg5	72	36.453	Oryzias_latipes
ENSMODG00000004532	-	86	35.714	ENSORLG00020013127	smg5	81	36.207	Oryzias_latipes_hni
ENSMODG00000004532	-	87	35.714	ENSORLG00015019014	smg5	81	36.207	Oryzias_latipes_hsok
ENSMODG00000004532	-	61	36.725	ENSOMEG00000021330	smg5	61	34.184	Oryzias_melastigma
ENSMODG00000004532	-	84	37.783	ENSOGAG00000004966	SMG5	93	35.610	Otolemur_garnettii
ENSMODG00000004532	-	87	37.867	ENSOARG00000005778	SMG5	93	36.585	Ovis_aries
ENSMODG00000004532	-	83	38.119	ENSOARG00000011963	-	78	38.119	Ovis_aries
ENSMODG00000004532	-	83	37.688	ENSPPAG00000011996	SMG5	93	37.317	Pan_paniscus
ENSMODG00000004532	-	81	38.522	ENSPPRG00000011901	SMG5	94	37.376	Panthera_pardus
ENSMODG00000004532	-	76	37.306	ENSPTIG00000007892	SMG5	88	34.769	Panthera_tigris_altaica
ENSMODG00000004532	-	83	37.940	ENSPTRG00000049282	-	93	37.317	Pan_troglodytes
ENSMODG00000004532	-	83	37.940	ENSPTRG00000023925	SMG5	93	37.317	Pan_troglodytes
ENSMODG00000004532	-	83	37.940	ENSPANG00000011201	SMG5	93	37.317	Papio_anubis
ENSMODG00000004532	-	86	35.338	ENSPKIG00000009402	smg5	90	32.152	Paramormyrops_kingsleyae
ENSMODG00000004532	-	86	38.293	ENSPSIG00000015198	SMG5	93	34.351	Pelodiscus_sinensis
ENSMODG00000004532	-	88	33.813	ENSPMGG00000010465	smg5	74	33.813	Periophthalmus_magnuspinnatus
ENSMODG00000004532	-	83	38.933	ENSPEMG00000001819	Smg5	93	39.024	Peromyscus_maniculatus_bairdii
ENSMODG00000004532	-	85	37.195	ENSPMAG00000000410	smg5	81	34.375	Petromyzon_marinus
ENSMODG00000004532	-	89	37.709	ENSPCIG00000018938	SMG5	81	37.915	Phascolarctos_cinereus
ENSMODG00000004532	-	85	34.815	ENSPFOG00000010191	smg5	71	35.309	Poecilia_formosa
ENSMODG00000004532	-	89	34.101	ENSPLAG00000009332	smg5	73	34.562	Poecilia_latipinna
ENSMODG00000004532	-	85	34.815	ENSPMEG00000014105	smg5	76	35.309	Poecilia_mexicana
ENSMODG00000004532	-	89	34.018	ENSPREG00000017713	smg5	73	34.475	Poecilia_reticulata
ENSMODG00000004532	-	83	37.940	ENSPPYG00000000723	SMG5	93	37.317	Pongo_abelii
ENSMODG00000004532	-	83	38.191	ENSPCOG00000004741	SMG5	93	37.561	Propithecus_coquereli
ENSMODG00000004532	-	85	37.467	ENSPVAG00000016748	SMG5	93	33.577	Pteropus_vampyrus
ENSMODG00000004532	-	89	34.411	ENSPNYG00000013397	smg5	75	34.071	Pundamilia_nyererei
ENSMODG00000004532	-	89	34.739	ENSPNAG00000028363	smg5	74	34.739	Pygocentrus_nattereri
ENSMODG00000004532	-	98	38.133	ENSRNOG00000019590	Smg5	93	38.049	Rattus_norvegicus
ENSMODG00000004532	-	83	37.688	ENSRBIG00000027428	SMG5	93	37.073	Rhinopithecus_bieti
ENSMODG00000004532	-	83	37.802	ENSRROG00000030035	SMG5	93	37.317	Rhinopithecus_roxellana
ENSMODG00000004532	-	83	37.940	ENSSBOG00000033339	SMG5	93	37.073	Saimiri_boliviensis_boliviensis
ENSMODG00000004532	-	99	45.889	ENSSHAG00000000561	-	99	45.838	Sarcophilus_harrisii
ENSMODG00000004532	-	82	32.199	ENSSHAG00000009572	-	85	33.871	Sarcophilus_harrisii
ENSMODG00000004532	-	75	46.285	ENSSHAG00000000935	-	92	46.501	Sarcophilus_harrisii
ENSMODG00000004532	-	85	38.992	ENSSHAG00000014163	SMG5	79	38.992	Sarcophilus_harrisii
ENSMODG00000004532	-	87	34.988	ENSSFOG00015024175	smg5	78	35.000	Scleropages_formosus
ENSMODG00000004532	-	86	34.568	ENSSMAG00000013059	smg5	71	34.568	Scophthalmus_maximus
ENSMODG00000004532	-	90	33.929	ENSSDUG00000007122	smg5	74	34.375	Seriola_dumerili
ENSMODG00000004532	-	90	34.234	ENSSLDG00000011418	smg5	74	34.234	Seriola_lalandi_dorsalis
ENSMODG00000004532	-	74	34.892	ENSSARG00000012484	SMG5	90	34.173	Sorex_araneus
ENSMODG00000004532	-	80	38.187	ENSSPUG00000002260	SMG5	86	34.921	Sphenodon_punctatus
ENSMODG00000004532	-	91	33.929	ENSSPAG00000014266	smg5	76	36.434	Stegastes_partitus
ENSMODG00000004532	-	83	43.034	ENSSSCG00000006490	-	93	41.899	Sus_scrofa
ENSMODG00000004532	-	75	33.596	ENSSSCG00000039308	-	75	32.678	Sus_scrofa
ENSMODG00000004532	-	86	38.095	ENSTGUG00000003748	-	79	38.155	Taeniopygia_guttata
ENSMODG00000004532	-	85	35.917	ENSTRUG00000012580	smg5	77	35.917	Takifugu_rubripes
ENSMODG00000004532	-	85	36.010	ENSTNIG00000010303	smg5	76	36.010	Tetraodon_nigroviridis
ENSMODG00000004532	-	60	37.602	ENSTBEG00000002777	SMG5	58	37.726	Tupaia_belangeri
ENSMODG00000004532	-	79	38.275	ENSTTRG00000001401	SMG5	83	35.762	Tursiops_truncatus
ENSMODG00000004532	-	83	37.750	ENSUAMG00000013721	SMG5	93	37.226	Ursus_americanus
ENSMODG00000004532	-	95	38.275	ENSUMAG00000018041	SMG5	91	40.997	Ursus_maritimus
ENSMODG00000004532	-	82	42.500	ENSVPAG00000009446	SMG5	85	44.809	Vicugna_pacos
ENSMODG00000004532	-	85	37.867	ENSVVUG00000005887	SMG5	82	37.324	Vulpes_vulpes
ENSMODG00000004532	-	59	34.783	ENSXETG00000033791	SMG5	72	36.810	Xenopus_tropicalis
ENSMODG00000004532	-	71	41.489	ENSXCOG00000004379	smg5	67	41.341	Xiphophorus_couchianus
ENSMODG00000004532	-	89	34.101	ENSXMAG00000013499	smg5	78	34.804	Xiphophorus_maculatus