EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000004535 (Gene tree)
Gene ID: 100024631
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 5203 bases
Position: chr1:172705010-172710212
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000005593	RRM_1	PF00076.22	2.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000005712	-	1310	-	ENSMODP00000005593	304 (aa)	-	F6U9B0

Gene Model

Click here to download ENSMODG00000004535's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03015	mRNA surveillance pathway	KEGG
mdo05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000004535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000004535	-	61	52.821	ENSMODG00000003873	-	71	51.795

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000004535	-	99	96.700	ENSG00000100836	PABPN1	99	96.988	Homo_sapiens
ENSMODG00000004535	-	61	96.774	ENSG00000258643	BCL2L2-PABPN1	56	96.774	Homo_sapiens
ENSMODG00000004535	-	82	69.444	ENSAPOG00000016425	pabpn1	85	78.713	Acanthochromis_polyacanthus
ENSMODG00000004535	-	61	96.774	ENSAMEG00000007048	BCL2L2-PABPN1	98	96.774	Ailuropoda_melanoleuca
ENSMODG00000004535	-	85	66.920	ENSACIG00000021744	pabpn1	92	78.049	Amphilophus_citrinellus
ENSMODG00000004535	-	79	70.248	ENSAOCG00000015805	pabpn1	85	78.713	Amphiprion_ocellaris
ENSMODG00000004535	-	79	70.248	ENSAPEG00000009623	pabpn1	85	78.713	Amphiprion_percula
ENSMODG00000004535	-	79	70.661	ENSATEG00000020531	pabpn1	85	79.208	Anabas_testudineus
ENSMODG00000004535	-	65	87.000	ENSACAG00000006185	-	73	85.922	Anolis_carolinensis
ENSMODG00000004535	-	65	96.954	ENSANAG00000024513	-	73	97.030	Aotus_nancymaae
ENSMODG00000004535	-	85	66.667	ENSACLG00000016374	pabpn1	66	77.949	Astatotilapia_calliptera
ENSMODG00000004535	-	85	68.199	ENSAMXG00000000452	pabpn1	92	83.030	Astyanax_mexicanus
ENSMODG00000004535	-	62	95.213	ENSBTAG00000053753	-	70	95.213	Bos_taurus
ENSMODG00000004535	-	99	96.040	ENSBTAG00000006884	PABPN1	99	96.259	Bos_taurus
ENSMODG00000004535	-	86	76.923	ENSBTAG00000050594	-	88	73.741	Bos_taurus
ENSMODG00000004535	-	99	96.700	ENSCJAG00000007960	-	99	96.700	Callithrix_jacchus
ENSMODG00000004535	-	54	94.512	ENSCJAG00000004407	-	82	94.512	Callithrix_jacchus
ENSMODG00000004535	-	74	95.175	ENSCAFG00000011482	PABPN1	68	97.115	Canis_familiaris
ENSMODG00000004535	-	99	96.700	ENSCAFG00020006651	-	99	96.700	Canis_lupus_dingo
ENSMODG00000004535	-	99	96.700	ENSCAFG00020007298	-	99	96.700	Canis_lupus_dingo
ENSMODG00000004535	-	99	96.370	ENSCHIG00000012184	PABPN1	99	96.370	Capra_hircus
ENSMODG00000004535	-	61	96.774	ENSTSYG00000033996	BCL2L2-PABPN1	98	96.571	Carlito_syrichta
ENSMODG00000004535	-	69	96.667	ENSCPOG00000025574	PABPN1	69	96.651	Cavia_porcellus
ENSMODG00000004535	-	99	96.700	ENSCCAG00000033954	BCL2L2-PABPN1	99	96.700	Cebus_capucinus
ENSMODG00000004535	-	99	96.700	ENSCATG00000038536	BCL2L2-PABPN1	99	96.700	Cercocebus_atys
ENSMODG00000004535	-	66	76.733	ENSCLAG00000012423	PABPN1	69	70.000	Chinchilla_lanigera
ENSMODG00000004535	-	66	95.545	ENSCSAG00000016036	PABPN1	68	95.673	Chlorocebus_sabaeus
ENSMODG00000004535	-	66	85.644	ENSCHOG00000004798	BCL2L2-PABPN1	87	85.644	Choloepus_hoffmanni
ENSMODG00000004535	-	54	91.463	ENSCPBG00000026060	-	92	91.463	Chrysemys_picta_bellii
ENSMODG00000004535	-	61	64.362	ENSCING00000012468	-	83	62.626	Ciona_intestinalis
ENSMODG00000004535	-	58	58.857	ENSCSAVG00000002001	-	92	59.146	Ciona_savignyi
ENSMODG00000004535	-	61	96.774	ENSCANG00000009750	BCL2L2-PABPN1	98	96.571	Colobus_angolensis_palliatus
ENSMODG00000004535	-	96	80.137	ENSCANG00000030980	-	72	80.693	Colobus_angolensis_palliatus
ENSMODG00000004535	-	91	91.727	ENSCGRG00001019696	Pabpn1	92	95.732	Cricetulus_griseus_chok1gshd
ENSMODG00000004535	-	54	95.732	ENSCGRG00000011102	Pabpn1	91	97.279	Cricetulus_griseus_crigri
ENSMODG00000004535	-	85	69.349	ENSCSEG00000008774	pabpn1	88	77.184	Cynoglossus_semilaevis
ENSMODG00000004535	-	86	66.794	ENSCVAG00000003152	pabpn1	85	80.296	Cyprinodon_variegatus
ENSMODG00000004535	-	82	70.120	ENSDARG00000045373	pabpn1	85	80.829	Danio_rerio
ENSMODG00000004535	-	99	96.700	ENSDNOG00000023682	PABPN1	99	96.700	Dasypus_novemcinctus
ENSMODG00000004535	-	69	95.694	ENSDORG00000028966	-	68	95.694	Dipodomys_ordii
ENSMODG00000004535	-	60	63.187	FBgn0005648	Pabp2	79	62.088	Drosophila_melanogaster
ENSMODG00000004535	-	63	80.311	ENSEBUG00000002322	pabpn1	83	80.311	Eptatretus_burgeri
ENSMODG00000004535	-	100	97.039	ENSEASG00005011716	PABPN1	100	97.039	Equus_asinus_asinus
ENSMODG00000004535	-	99	97.020	ENSECAG00000011652	PABPN1	99	96.939	Equus_caballus
ENSMODG00000004535	-	93	87.943	ENSEEUG00000012973	-	71	90.431	Erinaceus_europaeus
ENSMODG00000004535	-	79	72.727	ENSELUG00000022654	pabpn1	84	83.744	Esox_lucius
ENSMODG00000004535	-	99	96.700	ENSFCAG00000031922	PABPN1	99	96.700	Felis_catus
ENSMODG00000004535	-	54	95.122	ENSFDAG00000018381	BCL2L2-PABPN1	92	95.122	Fukomys_damarensis
ENSMODG00000004535	-	79	69.008	ENSFHEG00000007215	pabpn1	85	78.325	Fundulus_heteroclitus
ENSMODG00000004535	-	82	70.635	ENSGMOG00000003922	pabpn1	66	83.505	Gadus_morhua
ENSMODG00000004535	-	63	88.601	ENSGALG00000052930	-	59	87.192	Gallus_gallus
ENSMODG00000004535	-	79	69.547	ENSGAFG00000017099	pabpn1	85	78.431	Gambusia_affinis
ENSMODG00000004535	-	82	68.254	ENSGACG00000002167	pabpn1	86	74.884	Gasterosteus_aculeatus
ENSMODG00000004535	-	99	96.700	ENSGGOG00000022683	-	99	96.700	Gorilla_gorilla
ENSMODG00000004535	-	92	79.505	ENSGGOG00000025919	-	96	82.069	Gorilla_gorilla
ENSMODG00000004535	-	92	75.269	ENSGGOG00000039675	-	71	82.199	Gorilla_gorilla
ENSMODG00000004535	-	79	70.661	ENSHBUG00000019523	pabpn1	85	79.208	Haplochromis_burtoni
ENSMODG00000004535	-	91	73.477	ENSHGLG00000018588	-	70	76.555	Heterocephalus_glaber_female
ENSMODG00000004535	-	69	96.172	ENSHGLG00000002927	-	92	97.279	Heterocephalus_glaber_female
ENSMODG00000004535	-	54	71.951	ENSHGLG00000009842	-	91	71.951	Heterocephalus_glaber_female
ENSMODG00000004535	-	54	85.714	ENSHGLG00100018935	-	92	85.714	Heterocephalus_glaber_male
ENSMODG00000004535	-	91	68.345	ENSHGLG00100015565	-	71	76.555	Heterocephalus_glaber_male
ENSMODG00000004535	-	58	96.610	ENSHGLG00100006673	-	92	97.279	Heterocephalus_glaber_male
ENSMODG00000004535	-	86	66.284	ENSHCOG00000004655	pabpn1	85	78.325	Hippocampus_comes
ENSMODG00000004535	-	58	83.523	ENSIPUG00000000180	-	85	78.351	Ictalurus_punctatus
ENSMODG00000004535	-	85	70.498	ENSIPUG00000008085	PABPN1	85	79.703	Ictalurus_punctatus
ENSMODG00000004535	-	58	96.571	ENSSTOG00000029847	BCL2L2-PABPN1	98	96.571	Ictidomys_tridecemlineatus
ENSMODG00000004535	-	58	96.571	ENSJJAG00000023507	Gm20521	98	96.571	Jaculus_jaculus
ENSMODG00000004535	-	66	81.095	ENSKMAG00000018748	pabpn1	85	78.818	Kryptolebias_marmoratus
ENSMODG00000004535	-	82	69.841	ENSLBEG00000027266	pabpn1	85	79.208	Labrus_bergylta
ENSMODG00000004535	-	58	87.640	ENSLACG00000000646	pabpn1	79	88.333	Latimeria_chalumnae
ENSMODG00000004535	-	82	71.429	ENSLOCG00000000796	pabpn1	69	84.021	Lepisosteus_oculatus
ENSMODG00000004535	-	67	64.734	ENSLOCG00000004694	pabpn1l	93	64.532	Lepisosteus_oculatus
ENSMODG00000004535	-	61	96.774	ENSMFAG00000032183	BCL2L2-PABPN1	98	96.571	Macaca_fascicularis
ENSMODG00000004535	-	61	96.774	ENSMMUG00000014747	BCL2L2-PABPN1	98	95.804	Macaca_mulatta
ENSMODG00000004535	-	96	75.676	ENSMMUG00000048382	-	67	80.100	Macaca_mulatta
ENSMODG00000004535	-	73	79.487	ENSMNEG00000035750	-	97	88.406	Macaca_nemestrina
ENSMODG00000004535	-	99	96.700	ENSMNEG00000045065	BCL2L2-PABPN1	99	96.700	Macaca_nemestrina
ENSMODG00000004535	-	61	96.774	ENSMLEG00000043862	BCL2L2-PABPN1	98	96.571	Mandrillus_leucophaeus
ENSMODG00000004535	-	96	71.331	ENSMLEG00000034623	-	96	86.232	Mandrillus_leucophaeus
ENSMODG00000004535	-	85	70.498	ENSMAMG00000007979	pabpn1	68	79.703	Mastacembelus_armatus
ENSMODG00000004535	-	82	69.841	ENSMZEG00005011904	pabpn1	66	79.793	Maylandia_zebra
ENSMODG00000004535	-	91	91.727	ENSMAUG00000007383	Gm20521	70	96.154	Mesocricetus_auratus
ENSMODG00000004535	-	99	96.370	ENSMICG00000010002	BCL2L2-PABPN1	99	96.370	Microcebus_murinus
ENSMODG00000004535	-	91	91.367	ENSMOCG00000018557	Gm20521	90	97.279	Microtus_ochrogaster
ENSMODG00000004535	-	82	70.238	ENSMMOG00000005405	pabpn1	85	79.703	Mola_mola
ENSMODG00000004535	-	85	70.115	ENSMALG00000019612	pabpn1	67	79.703	Monopterus_albus
ENSMODG00000004535	-	61	94.624	MGP_CAROLIEiJ_G0019276	Gm20521	56	94.624	Mus_caroli
ENSMODG00000004535	-	91	90.647	MGP_CAROLIEiJ_G0019277	Pabpn1	97	90.566	Mus_caroli
ENSMODG00000004535	-	91	91.007	ENSMUSG00000022194	Pabpn1	97	90.566	Mus_musculus
ENSMODG00000004535	-	61	95.161	ENSMUSG00000092232	Gm20521	56	95.161	Mus_musculus
ENSMODG00000004535	-	61	95.161	MGP_PahariEiJ_G0030294	Gm20521	56	95.161	Mus_pahari
ENSMODG00000004535	-	91	91.007	MGP_PahariEiJ_G0030295	Pabpn1	100	97.619	Mus_pahari
ENSMODG00000004535	-	91	91.007	MGP_SPRETEiJ_G0020166	Pabpn1	97	90.566	Mus_spretus
ENSMODG00000004535	-	61	95.161	MGP_SPRETEiJ_G0020165	Gm20521	56	95.161	Mus_spretus
ENSMODG00000004535	-	55	96.988	ENSMPUG00000006775	-	99	96.988	Mustela_putorius_furo
ENSMODG00000004535	-	61	94.624	ENSMLUG00000003800	-	98	94.624	Myotis_lucifugus
ENSMODG00000004535	-	92	86.121	ENSMLUG00000012452	-	69	90.476	Myotis_lucifugus
ENSMODG00000004535	-	94	76.655	ENSMLUG00000028677	-	74	92.079	Myotis_lucifugus
ENSMODG00000004535	-	61	96.774	ENSNGAG00000019529	Gm20521	56	96.774	Nannospalax_galili
ENSMODG00000004535	-	82	69.841	ENSNBRG00000023955	pabpn1	92	78.049	Neolamprologus_brichardi
ENSMODG00000004535	-	96	75.085	ENSNLEG00000030598	-	77	78.365	Nomascus_leucogenys
ENSMODG00000004535	-	68	97.115	ENSNLEG00000015007	-	74	97.115	Nomascus_leucogenys
ENSMODG00000004535	-	58	84.571	ENSODEG00000011555	-	88	84.146	Octodon_degus
ENSMODG00000004535	-	69	96.172	ENSODEG00000002083	BCL2L2-PABPN1	68	96.154	Octodon_degus
ENSMODG00000004535	-	91	79.496	ENSODEG00000003739	-	70	83.173	Octodon_degus
ENSMODG00000004535	-	82	69.841	ENSONIG00000008112	pabpn1	66	79.793	Oreochromis_niloticus
ENSMODG00000004535	-	69	95.215	ENSOCUG00000016174	PABPN1	76	95.673	Oryctolagus_cuniculus
ENSMODG00000004535	-	67	82.039	ENSORLG00000027900	pabpn1	83	78.000	Oryzias_latipes
ENSMODG00000004535	-	67	82.039	ENSORLG00020004681	pabpn1	67	80.198	Oryzias_latipes_hni
ENSMODG00000004535	-	67	82.039	ENSORLG00015000018	pabpn1	85	79.703	Oryzias_latipes_hsok
ENSMODG00000004535	-	63	82.902	ENSOMEG00000016618	pabpn1	71	75.598	Oryzias_melastigma
ENSMODG00000004535	-	99	96.700	ENSOGAG00000008710	PABPN1	99	96.700	Otolemur_garnettii
ENSMODG00000004535	-	61	96.774	ENSOARG00000019336	BCL2L2-PABPN1	51	96.774	Ovis_aries
ENSMODG00000004535	-	61	96.774	ENSPPAG00000028984	BCL2L2-PABPN1	99	96.988	Pan_paniscus
ENSMODG00000004535	-	54	80.488	ENSPPAG00000039421	-	91	80.488	Pan_paniscus
ENSMODG00000004535	-	99	96.700	ENSPPRG00000010567	PABPN1	99	96.700	Panthera_pardus
ENSMODG00000004535	-	58	96.571	ENSPTIG00000001063	BCL2L2-PABPN1	98	96.571	Panthera_tigris_altaica
ENSMODG00000004535	-	99	96.700	ENSPTRG00000006167	BCL2L2	99	96.700	Pan_troglodytes
ENSMODG00000004535	-	92	69.892	ENSPTRG00000047273	-	89	64.388	Pan_troglodytes
ENSMODG00000004535	-	96	76.109	ENSPANG00000023326	-	97	88.406	Papio_anubis
ENSMODG00000004535	-	99	96.700	ENSPANG00000021100	BCL2L2-PABPN1	99	96.700	Papio_anubis
ENSMODG00000004535	-	82	69.444	ENSPKIG00000008144	-	67	80.198	Paramormyrops_kingsleyae
ENSMODG00000004535	-	67	81.068	ENSPKIG00000018052	pabpn1	85	81.773	Paramormyrops_kingsleyae
ENSMODG00000004535	-	53	71.429	ENSPKIG00000008340	pabpn1l	79	71.429	Paramormyrops_kingsleyae
ENSMODG00000004535	-	82	69.048	ENSPMGG00000022027	pabpn1	69	79.275	Periophthalmus_magnuspinnatus
ENSMODG00000004535	-	91	91.727	ENSPEMG00000008332	Gm20521	96	91.195	Peromyscus_maniculatus_bairdii
ENSMODG00000004535	-	54	78.363	ENSPMAG00000006212	pabpn1	83	75.124	Petromyzon_marinus
ENSMODG00000004535	-	99	99.340	ENSPCIG00000027751	-	99	99.340	Phascolarctos_cinereus
ENSMODG00000004535	-	85	66.794	ENSPFOG00000010351	pabpn1	84	79.902	Poecilia_formosa
ENSMODG00000004535	-	86	68.441	ENSPLAG00000022696	pabpn1	68	78.922	Poecilia_latipinna
ENSMODG00000004535	-	79	67.078	ENSPMEG00000020856	pabpn1	85	79.902	Poecilia_mexicana
ENSMODG00000004535	-	82	66.798	ENSPREG00000011278	pabpn1	85	80.392	Poecilia_reticulata
ENSMODG00000004535	-	86	96.565	ENSPPYG00000005663	PABPN1	71	97.487	Pongo_abelii
ENSMODG00000004535	-	88	85.185	ENSPCAG00000005902	PABPN1	92	85.185	Procavia_capensis
ENSMODG00000004535	-	99	96.370	ENSPCOG00000028047	BCL2L2-PABPN1	99	96.370	Propithecus_coquereli
ENSMODG00000004535	-	68	93.269	ENSPVAG00000005270	PABPN1	66	94.527	Pteropus_vampyrus
ENSMODG00000004535	-	79	70.661	ENSPNYG00000013182	pabpn1	85	79.208	Pundamilia_nyererei
ENSMODG00000004535	-	65	61.111	ENSPNAG00000021666	pabpn1l	93	62.312	Pygocentrus_nattereri
ENSMODG00000004535	-	82	71.032	ENSPNAG00000023526	pabpn1	85	80.693	Pygocentrus_nattereri
ENSMODG00000004535	-	91	91.367	ENSRNOG00000042195	Pabpn1	69	95.673	Rattus_norvegicus
ENSMODG00000004535	-	97	79.592	ENSRBIG00000039547	-	73	83.085	Rhinopithecus_bieti
ENSMODG00000004535	-	58	97.175	ENSRBIG00000040762	BCL2L2-PABPN1	55	97.175	Rhinopithecus_bieti
ENSMODG00000004535	-	91	82.671	ENSRBIG00000042811	-	86	83.654	Rhinopithecus_bieti
ENSMODG00000004535	-	91	80.505	ENSRROG00000036409	-	82	82.625	Rhinopithecus_roxellana
ENSMODG00000004535	-	99	76.412	ENSRROG00000040409	-	74	82.673	Rhinopithecus_roxellana
ENSMODG00000004535	-	58	97.175	ENSRROG00000045535	BCL2L2-PABPN1	98	96.571	Rhinopithecus_roxellana
ENSMODG00000004535	-	55	96.988	ENSSBOG00000026930	BCL2L2-PABPN1	99	96.988	Saimiri_boliviensis_boliviensis
ENSMODG00000004535	-	71	88.372	ENSSHAG00000014841	-	85	99.462	Sarcophilus_harrisii
ENSMODG00000004535	-	87	66.160	ENSSHAG00000007707	-	89	75.598	Sarcophilus_harrisii
ENSMODG00000004535	-	67	76.555	ENSSFOG00015012565	pabpn1	89	78.218	Scleropages_formosus
ENSMODG00000004535	-	64	63.265	ENSSFOG00015015833	pabpn1l	87	63.959	Scleropages_formosus
ENSMODG00000004535	-	79	69.835	ENSSFOG00015014718	pabpn1	85	78.713	Scleropages_formosus
ENSMODG00000004535	-	82	69.841	ENSSMAG00000020157	pabpn1	85	79.208	Scophthalmus_maximus
ENSMODG00000004535	-	85	70.115	ENSSDUG00000020582	pabpn1	67	79.703	Seriola_dumerili
ENSMODG00000004535	-	79	70.661	ENSSLDG00000007118	pabpn1	85	79.208	Seriola_lalandi_dorsalis
ENSMODG00000004535	-	54	90.854	ENSSPUG00000018308	-	92	90.854	Sphenodon_punctatus
ENSMODG00000004535	-	82	69.841	ENSSPAG00000021658	pabpn1	85	81.281	Stegastes_partitus
ENSMODG00000004535	-	93	63.475	ENSSSCG00000034805	-	75	66.832	Sus_scrofa
ENSMODG00000004535	-	56	53.216	ENSSSCG00000038472	-	89	50.610	Sus_scrofa
ENSMODG00000004535	-	100	97.039	ENSSSCG00000002023	PABPN1	100	97.039	Sus_scrofa
ENSMODG00000004535	-	82	70.238	ENSTRUG00000023664	pabpn1	85	79.703	Takifugu_rubripes
ENSMODG00000004535	-	67	80.097	ENSTNIG00000005369	pabpn1	92	78.218	Tetraodon_nigroviridis
ENSMODG00000004535	-	99	96.040	ENSUAMG00000024460	PABPN1	99	96.040	Ursus_americanus
ENSMODG00000004535	-	62	97.326	ENSUMAG00000014288	BCL2L2-PABPN1	56	97.326	Ursus_maritimus
ENSMODG00000004535	-	63	95.263	ENSVVUG00000019912	BCL2L2-PABPN1	75	95.263	Vulpes_vulpes
ENSMODG00000004535	-	63	88.601	ENSXETG00000014597	pabpn1	65	91.237	Xenopus_tropicalis
ENSMODG00000004535	-	51	68.387	ENSXCOG00000005158	pabpn1	88	79.866	Xiphophorus_couchianus
ENSMODG00000004535	-	85	67.557	ENSXMAG00000006196	pabpn1	85	80.882	Xiphophorus_maculatus