EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000004576 (Gene tree)
Gene ID: 100016574
Gene Symbol: -
Alias: -
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 10952 bases
Position: chr4:274539339-274550290
Accession: 100016574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000005641	SRP54	PF00448.22	4.5e-48	1	1
ENSMODP00000041077	SRP54	PF00448.22	3.7e-36	1	1
ENSMODP00000041077	SRP54_N	PF02881.19	2.5e-08	1	1
ENSMODP00000005641	SRP54_N	PF02881.19	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000005760	-	1917	-	ENSMODP00000005641	634 (aa)	XP_001365549	F6R4C7
ENSMODT00000044187	-	6042	-	ENSMODP00000041077	616 (aa)	-	K7E5M5

Gene Model

Click here to download ENSMODG00000004576's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000004576's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000004576	-	100	89.969	ENSG00000182934	SRPRA	100	90.454	Homo_sapiens
ENSMODG00000004576	-	100	67.270	ENSAPOG00000017588	srpra	100	68.127	Acanthochromis_polyacanthus
ENSMODG00000004576	-	100	89.969	ENSAMEG00000000117	SRPRA	100	90.454	Ailuropoda_melanoleuca
ENSMODG00000004576	-	100	65.861	ENSACIG00000021588	srpra	100	66.870	Amphilophus_citrinellus
ENSMODG00000004576	-	100	67.481	ENSAOCG00000018884	srpra	100	68.702	Amphiprion_ocellaris
ENSMODG00000004576	-	100	67.270	ENSAPEG00000022286	srpra	100	67.293	Amphiprion_percula
ENSMODG00000004576	-	83	86.032	ENSATEG00000023578	srpra	94	85.061	Anabas_testudineus
ENSMODG00000004576	-	94	76.645	ENSAPLG00000016079	SRPRA	100	77.668	Anas_platyrhynchos
ENSMODG00000004576	-	100	74.422	ENSACAG00000000108	SRPRA	100	76.579	Anolis_carolinensis
ENSMODG00000004576	-	100	89.812	ENSANAG00000020346	SRPRA	100	90.297	Aotus_nancymaae
ENSMODG00000004576	-	100	66.972	ENSACLG00000000518	srpra	100	67.431	Astatotilapia_calliptera
ENSMODG00000004576	-	100	64.119	ENSAMXG00000009975	srpra	100	63.339	Astyanax_mexicanus
ENSMODG00000004576	-	100	90.610	ENSBTAG00000014105	SRPRA	100	90.610	Bos_taurus
ENSMODG00000004576	-	99	48.710	WBGene00009521	F38A1.8	99	48.416	Caenorhabditis_elegans
ENSMODG00000004576	-	100	89.812	ENSCJAG00000008752	SRPRA	100	89.984	Callithrix_jacchus
ENSMODG00000004576	-	100	86.991	ENSCAFG00000010474	SRPRA	100	87.480	Canis_familiaris
ENSMODG00000004576	-	100	89.028	ENSCAFG00020010608	SRPRA	100	89.515	Canis_lupus_dingo
ENSMODG00000004576	-	100	90.610	ENSCHIG00000012423	SRPRA	100	90.610	Capra_hircus
ENSMODG00000004576	-	82	94.972	ENSTSYG00000005187	SRPRA	100	94.972	Carlito_syrichta
ENSMODG00000004576	-	95	83.444	ENSCAPG00000007098	SRPRA	91	93.985	Cavia_aperea
ENSMODG00000004576	-	100	89.342	ENSCPOG00000014976	SRPRA	100	89.828	Cavia_porcellus
ENSMODG00000004576	-	100	89.498	ENSCCAG00000025602	SRPRA	100	89.984	Cebus_capucinus
ENSMODG00000004576	-	100	89.812	ENSCATG00000039354	SRPRA	100	90.454	Cercocebus_atys
ENSMODG00000004576	-	100	89.655	ENSCLAG00000016839	SRPRA	100	90.141	Chinchilla_lanigera
ENSMODG00000004576	-	100	89.655	ENSCSAG00000002271	SRPRA	100	90.141	Chlorocebus_sabaeus
ENSMODG00000004576	-	56	96.429	ENSCHOG00000010015	-	73	96.429	Choloepus_hoffmanni
ENSMODG00000004576	-	100	76.462	ENSCPBG00000011128	SRPRA	100	78.341	Chrysemys_picta_bellii
ENSMODG00000004576	-	99	58.346	ENSCING00000008954	-	100	58.384	Ciona_intestinalis
ENSMODG00000004576	-	99	58.706	ENSCSAVG00000005602	-	100	58.462	Ciona_savignyi
ENSMODG00000004576	-	100	89.185	ENSCANG00000032337	SRPRA	100	89.984	Colobus_angolensis_palliatus
ENSMODG00000004576	-	100	88.715	ENSCGRG00001017670	Srpr	100	89.828	Cricetulus_griseus_chok1gshd
ENSMODG00000004576	-	100	88.715	ENSCGRG00000009892	Srpr	100	89.828	Cricetulus_griseus_crigri
ENSMODG00000004576	-	100	67.121	ENSCSEG00000002374	srpra	100	68.085	Cynoglossus_semilaevis
ENSMODG00000004576	-	100	67.727	ENSCVAG00000019881	srpra	100	68.807	Cyprinodon_variegatus
ENSMODG00000004576	-	100	65.701	ENSDARG00000061124	srpra	100	65.198	Danio_rerio
ENSMODG00000004576	-	100	89.767	ENSDNOG00000010821	SRPRA	100	89.767	Dasypus_novemcinctus
ENSMODG00000004576	-	100	88.871	ENSDORG00000016719	Srpr	100	89.358	Dipodomys_ordii
ENSMODG00000004576	-	99	51.087	FBgn0010391	Gtp-bp	100	51.314	Drosophila_melanogaster
ENSMODG00000004576	-	100	87.383	ENSETEG00000013956	SRPRA	100	87.383	Echinops_telfairi
ENSMODG00000004576	-	62	70.529	ENSEBUG00000002602	srpra	89	70.297	Eptatretus_burgeri
ENSMODG00000004576	-	100	89.984	ENSEASG00005022980	SRPRA	100	89.515	Equus_asinus_asinus
ENSMODG00000004576	-	100	89.828	ENSECAG00000014692	SRPRA	100	89.358	Equus_caballus
ENSMODG00000004576	-	100	81.903	ENSEEUG00000007920	SRPRA	100	81.903	Erinaceus_europaeus
ENSMODG00000004576	-	100	67.841	ENSELUG00000017643	srpra	100	68.098	Esox_lucius
ENSMODG00000004576	-	100	90.297	ENSFCAG00000011274	-	100	90.297	Felis_catus
ENSMODG00000004576	-	82	88.258	ENSFCAG00000030894	-	99	88.258	Felis_catus
ENSMODG00000004576	-	99	73.552	ENSFALG00000005048	SRPRA	99	74.103	Ficedula_albicollis
ENSMODG00000004576	-	100	89.498	ENSFDAG00000016229	SRPRA	100	89.984	Fukomys_damarensis
ENSMODG00000004576	-	100	67.123	ENSFHEG00000016959	srpra	100	68.341	Fundulus_heteroclitus
ENSMODG00000004576	-	100	67.026	ENSGMOG00000013244	srpra	100	67.688	Gadus_morhua
ENSMODG00000004576	-	100	76.971	ENSGALG00000030759	SRPRA	100	77.778	Gallus_gallus
ENSMODG00000004576	-	100	67.835	ENSGAFG00000000453	srpra	100	68.598	Gambusia_affinis
ENSMODG00000004576	-	100	66.463	ENSGACG00000006550	srpra	100	67.477	Gasterosteus_aculeatus
ENSMODG00000004576	-	100	76.769	ENSGAGG00000021157	SRPRA	100	78.802	Gopherus_agassizii
ENSMODG00000004576	-	100	89.969	ENSGGOG00000012962	SRPRA	100	90.454	Gorilla_gorilla
ENSMODG00000004576	-	100	66.820	ENSHBUG00000000119	srpra	100	67.278	Haplochromis_burtoni
ENSMODG00000004576	-	100	89.185	ENSHGLG00000001597	SRPR	99	92.806	Heterocephalus_glaber_female
ENSMODG00000004576	-	100	89.185	ENSHGLG00100006449	SRPR	99	92.806	Heterocephalus_glaber_male
ENSMODG00000004576	-	100	68.037	ENSHCOG00000010749	srpra	100	68.950	Hippocampus_comes
ENSMODG00000004576	-	94	63.636	ENSIPUG00000000867	srpra	99	63.799	Ictalurus_punctatus
ENSMODG00000004576	-	100	89.185	ENSSTOG00000009897	SRPRA	100	89.671	Ictidomys_tridecemlineatus
ENSMODG00000004576	-	100	89.185	ENSJJAG00000020272	Srpr	100	89.812	Jaculus_jaculus
ENSMODG00000004576	-	100	67.678	ENSKMAG00000002280	srpra	100	68.741	Kryptolebias_marmoratus
ENSMODG00000004576	-	100	66.616	ENSLBEG00000009608	srpra	100	66.868	Labrus_bergylta
ENSMODG00000004576	-	100	69.172	ENSLACG00000017781	SRPRA	100	70.859	Latimeria_chalumnae
ENSMODG00000004576	-	100	68.798	ENSLOCG00000002733	srpra	100	68.798	Lepisosteus_oculatus
ENSMODG00000004576	-	100	88.732	ENSLAFG00000010252	SRPRA	100	89.531	Loxodonta_africana
ENSMODG00000004576	-	100	89.812	ENSMFAG00000032606	SRPRA	100	90.297	Macaca_fascicularis
ENSMODG00000004576	-	100	89.812	ENSMMUG00000007938	SRPRA	100	90.297	Macaca_mulatta
ENSMODG00000004576	-	100	89.655	ENSMNEG00000030709	SRPRA	100	90.141	Macaca_nemestrina
ENSMODG00000004576	-	100	89.812	ENSMLEG00000043404	SRPRA	100	90.454	Mandrillus_leucophaeus
ENSMODG00000004576	-	100	65.667	ENSMAMG00000000473	srpra	100	67.071	Mastacembelus_armatus
ENSMODG00000004576	-	100	66.972	ENSMZEG00005013432	srpra	100	67.431	Maylandia_zebra
ENSMODG00000004576	-	94	76.694	ENSMGAG00000000732	SRPRA	100	77.558	Meleagris_gallopavo
ENSMODG00000004576	-	100	88.871	ENSMAUG00000015648	Srpr	100	89.498	Mesocricetus_auratus
ENSMODG00000004576	-	100	89.498	ENSMICG00000015981	SRPRA	100	89.828	Microcebus_murinus
ENSMODG00000004576	-	100	88.401	ENSMOCG00000008311	Srpr	100	89.671	Microtus_ochrogaster
ENSMODG00000004576	-	100	66.102	ENSMMOG00000005019	srpra	100	66.564	Mola_mola
ENSMODG00000004576	-	100	67.171	ENSMALG00000011343	srpra	100	68.223	Monopterus_albus
ENSMODG00000004576	-	100	88.558	MGP_CAROLIEiJ_G0031951	Srpr	100	89.828	Mus_caroli
ENSMODG00000004576	-	100	89.671	ENSMUSG00000032042	Srpr	100	89.671	Mus_musculus
ENSMODG00000004576	-	100	88.715	MGP_PahariEiJ_G0014816	Srpr	100	89.984	Mus_pahari
ENSMODG00000004576	-	100	84.030	MGP_SPRETEiJ_G0033075	Srpr	100	85.097	Mus_spretus
ENSMODG00000004576	-	100	89.028	ENSMPUG00000006626	SRPRA	100	89.515	Mustela_putorius_furo
ENSMODG00000004576	-	100	88.245	ENSMLUG00000017334	SRPRA	100	89.671	Myotis_lucifugus
ENSMODG00000004576	-	100	88.871	ENSNGAG00000015686	Srpr	100	89.358	Nannospalax_galili
ENSMODG00000004576	-	100	67.023	ENSNBRG00000017311	srpra	100	68.092	Neolamprologus_brichardi
ENSMODG00000004576	-	99	85.647	ENSNLEG00000007467	SRPRA	100	89.836	Nomascus_leucogenys
ENSMODG00000004576	-	94	96.333	ENSMEUG00000004956	SRPRA	100	96.333	Notamacropus_eugenii
ENSMODG00000004576	-	100	82.786	ENSOPRG00000013160	SRPRA	100	83.750	Ochotona_princeps
ENSMODG00000004576	-	100	89.498	ENSODEG00000004730	SRPRA	100	90.125	Octodon_degus
ENSMODG00000004576	-	100	66.820	ENSONIG00000005324	srpra	100	67.278	Oreochromis_niloticus
ENSMODG00000004576	-	100	89.655	ENSOCUG00000017057	SRPRA	100	89.828	Oryctolagus_cuniculus
ENSMODG00000004576	-	86	85.714	ENSORLG00000014676	srpra	100	67.638	Oryzias_latipes
ENSMODG00000004576	-	100	66.923	ENSORLG00020009240	srpra	100	67.638	Oryzias_latipes_hni
ENSMODG00000004576	-	100	67.656	ENSORLG00015015405	srpra	100	67.747	Oryzias_latipes_hsok
ENSMODG00000004576	-	100	68.281	ENSOMEG00000005872	srpra	100	68.356	Oryzias_melastigma
ENSMODG00000004576	-	100	89.984	ENSOGAG00000008926	SRPRA	100	89.984	Otolemur_garnettii
ENSMODG00000004576	-	100	87.832	ENSOARG00000012397	SRPRA	100	87.832	Ovis_aries
ENSMODG00000004576	-	100	89.969	ENSPPAG00000030813	SRPRA	100	90.454	Pan_paniscus
ENSMODG00000004576	-	100	90.297	ENSPPRG00000001542	SRPRA	100	90.297	Panthera_pardus
ENSMODG00000004576	-	100	90.141	ENSPTIG00000006989	SRPRA	100	90.141	Panthera_tigris_altaica
ENSMODG00000004576	-	100	89.969	ENSPTRG00000028360	SRPRA	100	90.454	Pan_troglodytes
ENSMODG00000004576	-	100	89.812	ENSPANG00000010858	SRPRA	100	90.297	Papio_anubis
ENSMODG00000004576	-	100	65.777	ENSPKIG00000016106	srpra	100	65.781	Paramormyrops_kingsleyae
ENSMODG00000004576	-	94	75.493	ENSPSIG00000012009	SRPRA	100	77.668	Pelodiscus_sinensis
ENSMODG00000004576	-	100	68.056	ENSPMGG00000001393	srpra	100	68.827	Periophthalmus_magnuspinnatus
ENSMODG00000004576	-	100	88.715	ENSPEMG00000018279	Srpr	100	89.984	Peromyscus_maniculatus_bairdii
ENSMODG00000004576	-	99	61.742	ENSPMAG00000009559	srpra	99	62.519	Petromyzon_marinus
ENSMODG00000004576	-	100	96.244	ENSPCIG00000010207	SRPRA	100	96.244	Phascolarctos_cinereus
ENSMODG00000004576	-	100	67.527	ENSPFOG00000003114	srpra	100	69.499	Poecilia_formosa
ENSMODG00000004576	-	100	67.629	ENSPLAG00000007323	srpra	100	69.499	Poecilia_latipinna
ENSMODG00000004576	-	100	67.527	ENSPMEG00000015658	srpra	100	69.499	Poecilia_mexicana
ENSMODG00000004576	-	100	68.285	ENSPREG00000004937	srpra	100	69.499	Poecilia_reticulata
ENSMODG00000004576	-	88	96.053	ENSPPYG00000004045	SRPRA	100	96.053	Pongo_abelii
ENSMODG00000004576	-	64	96.124	ENSPCAG00000003801	-	64	96.124	Procavia_capensis
ENSMODG00000004576	-	100	89.655	ENSPCOG00000025726	SRPRA	100	90.141	Propithecus_coquereli
ENSMODG00000004576	-	100	88.401	ENSPVAG00000000993	SRPRA	100	89.828	Pteropus_vampyrus
ENSMODG00000004576	-	100	66.972	ENSPNYG00000012371	srpra	100	67.431	Pundamilia_nyererei
ENSMODG00000004576	-	100	63.914	ENSPNAG00000013476	srpra	100	65.344	Pygocentrus_nattereri
ENSMODG00000004576	-	100	88.558	ENSRNOG00000010543	Srpra	100	89.828	Rattus_norvegicus
ENSMODG00000004576	-	100	90.297	ENSRBIG00000008702	SRPRA	100	90.297	Rhinopithecus_bieti
ENSMODG00000004576	-	100	89.828	ENSRROG00000029494	SRPRA	100	90.312	Rhinopithecus_roxellana
ENSMODG00000004576	-	68	37.996	YDR292C	-	63	40.695	Saccharomyces_cerevisiae
ENSMODG00000004576	-	100	89.655	ENSSBOG00000035892	SRPRA	100	90.141	Saimiri_boliviensis_boliviensis
ENSMODG00000004576	-	94	95.341	ENSSHAG00000009168	SRPRA	100	95.585	Sarcophilus_harrisii
ENSMODG00000004576	-	100	63.265	ENSSFOG00015008837	srpra	100	64.798	Scleropages_formosus
ENSMODG00000004576	-	100	66.354	ENSSMAG00000002783	srpra	100	66.874	Scophthalmus_maximus
ENSMODG00000004576	-	100	66.981	ENSSDUG00000013920	srpra	100	66.667	Seriola_dumerili
ENSMODG00000004576	-	100	66.311	ENSSLDG00000008601	srpra	93	67.073	Seriola_lalandi_dorsalis
ENSMODG00000004576	-	83	100.000	ENSSARG00000012434	SRPRA	86	100.000	Sorex_araneus
ENSMODG00000004576	-	100	76.971	ENSSPUG00000018221	SRPRA	100	77.778	Sphenodon_punctatus
ENSMODG00000004576	-	100	67.123	ENSSPAG00000005103	srpra	100	67.939	Stegastes_partitus
ENSMODG00000004576	-	100	89.812	ENSSSCG00000015227	SRPRA	100	90.297	Sus_scrofa
ENSMODG00000004576	-	94	73.719	ENSTGUG00000000815	SRPRA	100	74.300	Taeniopygia_guttata
ENSMODG00000004576	-	100	66.509	ENSTRUG00000006856	srpra	100	68.000	Takifugu_rubripes
ENSMODG00000004576	-	100	65.350	ENSTNIG00000010316	srpra	100	65.350	Tetraodon_nigroviridis
ENSMODG00000004576	-	100	89.828	ENSTTRG00000001558	SRPRA	100	89.828	Tursiops_truncatus
ENSMODG00000004576	-	100	89.828	ENSUAMG00000005510	SRPRA	100	90.312	Ursus_americanus
ENSMODG00000004576	-	95	82.248	ENSUMAG00000002269	SRPRA	99	82.419	Ursus_maritimus
ENSMODG00000004576	-	69	96.124	ENSVPAG00000001077	SRPRA	75	96.124	Vicugna_pacos
ENSMODG00000004576	-	100	88.715	ENSVVUG00000020094	SRPRA	100	89.515	Vulpes_vulpes
ENSMODG00000004576	-	100	62.405	ENSXETG00000003920	srpra	100	63.761	Xenopus_tropicalis
ENSMODG00000004576	-	86	86.984	ENSXCOG00000001286	srpra	99	85.586	Xiphophorus_couchianus
ENSMODG00000004576	-	100	68.341	ENSXMAG00000028401	srpra	100	69.102	Xiphophorus_maculatus