EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000004625 (Gene tree)
Gene ID: 100023703
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 19686 bases
Position: chr6:104993020-105012705
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000005704	Ribosomal_L1	PF00687.21	4.4e-53	1	1
ENSMODP00000005701	Ribosomal_L1	PF00687.21	4.4e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000005824	-	1371	-	ENSMODP00000005704	456 (aa)	-	F6UNR4
ENSMODT00000005821	-	1380	-	ENSMODP00000005701	459 (aa)	-	F6UNU5

Gene Model

Click here to download ENSMODG00000004625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000004625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000004625	-	88	63.184	ENSMODG00000029494	-	86	63.184

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000004625	-	93	46.032	ENSG00000171490	RSL1D1	100	62.245	Homo_sapiens
ENSMODG00000004625	-	52	51.899	ENSAPOG00000004544	rsl1d1	93	43.011	Acanthochromis_polyacanthus
ENSMODG00000004625	-	100	45.798	ENSAMEG00000009570	RSL1D1	93	46.008	Ailuropoda_melanoleuca
ENSMODG00000004625	-	52	51.055	ENSACIG00000006608	rsl1d1	91	42.105	Amphilophus_citrinellus
ENSMODG00000004625	-	52	52.743	ENSAOCG00000001548	rsl1d1	83	44.478	Amphiprion_ocellaris
ENSMODG00000004625	-	52	52.743	ENSAPEG00000003334	rsl1d1	82	45.566	Amphiprion_percula
ENSMODG00000004625	-	53	51.852	ENSATEG00000009247	rsl1d1	95	42.781	Anabas_testudineus
ENSMODG00000004625	-	97	44.989	ENSAPLG00000004451	RSL1D1	99	44.989	Anas_platyrhynchos
ENSMODG00000004625	-	100	47.046	ENSANAG00000034590	-	93	47.257	Aotus_nancymaae
ENSMODG00000004625	-	100	42.857	ENSANAG00000026520	-	93	44.468	Aotus_nancymaae
ENSMODG00000004625	-	100	45.127	ENSANAG00000028185	-	93	45.127	Aotus_nancymaae
ENSMODG00000004625	-	71	45.062	ENSACLG00000017535	rsl1d1	84	45.062	Astatotilapia_calliptera
ENSMODG00000004625	-	52	51.055	ENSAMXG00000008624	rsl1d1	82	43.293	Astyanax_mexicanus
ENSMODG00000004625	-	100	47.234	ENSBTAG00000014588	RSL1D1	93	47.170	Bos_taurus
ENSMODG00000004625	-	93	46.085	ENSCJAG00000008375	-	94	47.122	Callithrix_jacchus
ENSMODG00000004625	-	93	47.738	ENSCJAG00000042606	-	94	47.122	Callithrix_jacchus
ENSMODG00000004625	-	100	46.817	ENSCAFG00000018865	RSL1D1	93	46.973	Canis_familiaris
ENSMODG00000004625	-	100	47.699	ENSCAFG00020024488	-	93	47.699	Canis_lupus_dingo
ENSMODG00000004625	-	96	37.162	ENSCAFG00020002457	-	90	37.162	Canis_lupus_dingo
ENSMODG00000004625	-	100	45.652	ENSCHIG00000009867	-	93	43.966	Capra_hircus
ENSMODG00000004625	-	99	47.425	ENSCHIG00000018658	-	93	47.732	Capra_hircus
ENSMODG00000004625	-	99	44.654	ENSTSYG00000009276	RSL1D1	93	44.654	Carlito_syrichta
ENSMODG00000004625	-	99	46.220	ENSCPOG00000010630	RSL1D1	93	45.842	Cavia_porcellus
ENSMODG00000004625	-	100	45.666	ENSCCAG00000017391	-	93	46.751	Cebus_capucinus
ENSMODG00000004625	-	99	43.601	ENSCCAG00000031641	-	89	43.404	Cebus_capucinus
ENSMODG00000004625	-	93	41.315	ENSCCAG00000025197	-	92	42.795	Cebus_capucinus
ENSMODG00000004625	-	92	43.919	ENSCATG00000031153	RSL1D1	91	44.144	Cercocebus_atys
ENSMODG00000004625	-	100	45.940	ENSCLAG00000010975	RSL1D1	94	45.798	Chinchilla_lanigera
ENSMODG00000004625	-	93	45.682	ENSCSAG00000008255	RSL1D1	93	45.127	Chlorocebus_sabaeus
ENSMODG00000004625	-	76	58.475	ENSCHOG00000010827	RSL1D1	68	58.475	Choloepus_hoffmanni
ENSMODG00000004625	-	52	63.713	ENSCPBG00000004564	RSL1D1	91	63.415	Chrysemys_picta_bellii
ENSMODG00000004625	-	50	35.217	ENSCING00000011810	-	100	35.217	Ciona_intestinalis
ENSMODG00000004625	-	50	30.736	ENSCSAVG00000011797	-	68	30.736	Ciona_savignyi
ENSMODG00000004625	-	93	44.595	ENSCANG00000029202	RSL1D1	93	44.235	Colobus_angolensis_palliatus
ENSMODG00000004625	-	81	45.867	ENSCGRG00001014989	Rsl1d1	82	46.400	Cricetulus_griseus_chok1gshd
ENSMODG00000004625	-	81	45.867	ENSCGRG00000001905	Rsl1d1	82	46.400	Cricetulus_griseus_crigri
ENSMODG00000004625	-	53	52.263	ENSCSEG00000019693	rsl1d1	80	44.136	Cynoglossus_semilaevis
ENSMODG00000004625	-	52	51.261	ENSCVAG00000000672	rsl1d1	83	43.072	Cyprinodon_variegatus
ENSMODG00000004625	-	52	50.840	ENSDARG00000055868	rsl1d1	78	44.136	Danio_rerio
ENSMODG00000004625	-	98	43.933	ENSDNOG00000040779	-	93	44.444	Dasypus_novemcinctus
ENSMODG00000004625	-	98	44.050	ENSDNOG00000004601	-	92	44.559	Dasypus_novemcinctus
ENSMODG00000004625	-	74	35.694	ENSDNOG00000047567	-	98	35.817	Dasypus_novemcinctus
ENSMODG00000004625	-	52	45.607	ENSEBUG00000005400	-	57	45.607	Eptatretus_burgeri
ENSMODG00000004625	-	99	47.579	ENSEASG00005011499	RSL1D1	93	47.579	Equus_asinus_asinus
ENSMODG00000004625	-	99	48.000	ENSECAG00000025036	RSL1D1	93	48.000	Equus_caballus
ENSMODG00000004625	-	79	64.516	ENSEEUG00000015569	-	80	64.516	Erinaceus_europaeus
ENSMODG00000004625	-	72	44.954	ENSELUG00000019243	rsl1d1	92	46.931	Esox_lucius
ENSMODG00000004625	-	100	45.929	ENSFCAG00000010114	RSL1D1	93	46.138	Felis_catus
ENSMODG00000004625	-	99	44.206	ENSFALG00000003869	RSL1D1	93	44.421	Ficedula_albicollis
ENSMODG00000004625	-	99	44.130	ENSFDAG00000011414	RSL1D1	92	44.348	Fukomys_damarensis
ENSMODG00000004625	-	54	49.590	ENSFHEG00000017235	rsl1d1	66	50.209	Fundulus_heteroclitus
ENSMODG00000004625	-	52	48.319	ENSGMOG00000013048	rsl1d1	84	48.319	Gadus_morhua
ENSMODG00000004625	-	98	44.469	ENSGALG00000033690	RSL1D1	96	44.805	Gallus_gallus
ENSMODG00000004625	-	54	49.590	ENSGAFG00000020794	rsl1d1	79	43.027	Gambusia_affinis
ENSMODG00000004625	-	80	40.000	ENSGACG00000004483	rsl1d1	89	40.055	Gasterosteus_aculeatus
ENSMODG00000004625	-	93	45.351	ENSGGOG00000013463	RSL1D1	92	44.872	Gorilla_gorilla
ENSMODG00000004625	-	71	44.444	ENSHBUG00000001551	rsl1d1	96	42.021	Haplochromis_burtoni
ENSMODG00000004625	-	100	45.217	ENSHGLG00000006774	RSL1D1	93	45.396	Heterocephalus_glaber_female
ENSMODG00000004625	-	100	45.652	ENSHGLG00100017781	RSL1D1	93	45.824	Heterocephalus_glaber_male
ENSMODG00000004625	-	52	49.789	ENSHCOG00000015208	rsl1d1	83	41.667	Hippocampus_comes
ENSMODG00000004625	-	72	44.545	ENSIPUG00000001677	rsl1d1	80	44.545	Ictalurus_punctatus
ENSMODG00000004625	-	92	45.035	ENSSTOG00000015400	RSL1D1	99	44.444	Ictidomys_tridecemlineatus
ENSMODG00000004625	-	93	44.755	ENSJJAG00000012115	Rsl1d1	90	44.907	Jaculus_jaculus
ENSMODG00000004625	-	52	50.209	ENSKMAG00000021908	rsl1d1	94	41.316	Kryptolebias_marmoratus
ENSMODG00000004625	-	52	50.628	ENSLBEG00000001076	rsl1d1	83	42.470	Labrus_bergylta
ENSMODG00000004625	-	52	55.462	ENSLOCG00000007416	rsl1d1	94	40.870	Lepisosteus_oculatus
ENSMODG00000004625	-	100	45.860	ENSLAFG00000013664	RSL1D1	90	46.285	Loxodonta_africana
ENSMODG00000004625	-	93	45.909	ENSMFAG00000037288	RSL1D1	92	45.396	Macaca_fascicularis
ENSMODG00000004625	-	93	45.909	ENSMMUG00000019632	RSL1D1	98	60.645	Macaca_mulatta
ENSMODG00000004625	-	93	45.682	ENSMNEG00000044196	RSL1D1	92	45.182	Macaca_nemestrina
ENSMODG00000004625	-	96	45.055	ENSMLEG00000042058	RSL1D1	92	44.968	Mandrillus_leucophaeus
ENSMODG00000004625	-	53	52.263	ENSMAMG00000004385	rsl1d1	85	44.910	Mastacembelus_armatus
ENSMODG00000004625	-	52	52.301	ENSMZEG00005007150	rsl1d1	84	45.062	Maylandia_zebra
ENSMODG00000004625	-	98	45.175	ENSMGAG00000000863	RSL1D1	97	45.572	Meleagris_gallopavo
ENSMODG00000004625	-	100	43.958	ENSMICG00000008229	RSL1D1	93	44.536	Microcebus_murinus
ENSMODG00000004625	-	81	46.842	ENSMOCG00000017724	Rsl1d1	83	46.053	Microtus_ochrogaster
ENSMODG00000004625	-	53	49.587	ENSMMOG00000003730	rsl1d1	81	49.587	Mola_mola
ENSMODG00000004625	-	53	52.675	ENSMALG00000009531	rsl1d1	91	45.404	Monopterus_albus
ENSMODG00000004625	-	98	43.601	ENSMUSG00000005846	Rsl1d1	81	47.895	Mus_musculus
ENSMODG00000004625	-	81	46.094	MGP_PahariEiJ_G0016164	Rsl1d1	81	46.335	Mus_pahari
ENSMODG00000004625	-	98	42.733	MGP_SPRETEiJ_G0021352	Rsl1d1	81	47.632	Mus_spretus
ENSMODG00000004625	-	100	46.362	ENSMPUG00000014548	RSL1D1	94	46.901	Mustela_putorius_furo
ENSMODG00000004625	-	99	45.397	ENSMLUG00000000784	RSL1D1	91	46.234	Myotis_lucifugus
ENSMODG00000004625	-	93	44.470	ENSNGAG00000009086	-	89	44.470	Nannospalax_galili
ENSMODG00000004625	-	97	42.544	ENSNGAG00000013578	-	97	42.919	Nannospalax_galili
ENSMODG00000004625	-	52	53.556	ENSNBRG00000002777	rsl1d1	83	46.914	Neolamprologus_brichardi
ENSMODG00000004625	-	93	45.455	ENSNLEG00000010196	-	93	45.877	Nomascus_leucogenys
ENSMODG00000004625	-	72	49.271	ENSNLEG00000012149	-	90	49.271	Nomascus_leucogenys
ENSMODG00000004625	-	99	44.079	ENSOPRG00000004442	-	92	43.844	Ochotona_princeps
ENSMODG00000004625	-	52	53.138	ENSONIG00000019757	rsl1d1	86	45.732	Oreochromis_niloticus
ENSMODG00000004625	-	52	54.661	ENSOANG00000009408	-	81	44.857	Ornithorhynchus_anatinus
ENSMODG00000004625	-	99	46.855	ENSOCUG00000004751	RSL1D1	93	46.610	Oryctolagus_cuniculus
ENSMODG00000004625	-	72	42.813	ENSORLG00000002877	rsl1d1	83	42.202	Oryzias_latipes
ENSMODG00000004625	-	72	42.508	ENSORLG00020006636	rsl1d1	83	42.508	Oryzias_latipes_hni
ENSMODG00000004625	-	76	41.499	ENSORLG00015005427	rsl1d1	88	41.499	Oryzias_latipes_hsok
ENSMODG00000004625	-	52	51.883	ENSOMEG00000008036	rsl1d1	79	43.827	Oryzias_melastigma
ENSMODG00000004625	-	97	46.421	ENSOGAG00000015151	RSL1D1	91	46.421	Otolemur_garnettii
ENSMODG00000004625	-	100	47.761	ENSOARG00000006923	RSL1D1	93	48.008	Ovis_aries
ENSMODG00000004625	-	93	46.259	ENSPPAG00000039716	RSL1D1	93	45.877	Pan_paniscus
ENSMODG00000004625	-	100	45.929	ENSPPRG00000005220	RSL1D1	93	46.667	Panthera_pardus
ENSMODG00000004625	-	100	47.335	ENSPTIG00000005526	RSL1D1	94	47.548	Panthera_tigris_altaica
ENSMODG00000004625	-	93	46.032	ENSPTRG00000007777	RSL1D1	93	45.666	Pan_troglodytes
ENSMODG00000004625	-	93	45.682	ENSPANG00000023073	RSL1D1	92	45.182	Papio_anubis
ENSMODG00000004625	-	52	49.367	ENSPKIG00000022687	rsl1d1	85	40.270	Paramormyrops_kingsleyae
ENSMODG00000004625	-	96	42.888	ENSPSIG00000011642	RSL1D1	96	46.070	Pelodiscus_sinensis
ENSMODG00000004625	-	52	55.932	ENSPMGG00000022261	rsl1d1	99	47.130	Periophthalmus_magnuspinnatus
ENSMODG00000004625	-	82	45.361	ENSPEMG00000009523	Rsl1d1	81	46.667	Peromyscus_maniculatus_bairdii
ENSMODG00000004625	-	86	74.046	ENSPCIG00000026851	-	92	74.300	Phascolarctos_cinereus
ENSMODG00000004625	-	54	50.410	ENSPFOG00000005017	rsl1d1	91	43.363	Poecilia_formosa
ENSMODG00000004625	-	54	50.410	ENSPLAG00000000482	rsl1d1	83	40.992	Poecilia_latipinna
ENSMODG00000004625	-	54	50.000	ENSPMEG00000007032	rsl1d1	68	49.798	Poecilia_mexicana
ENSMODG00000004625	-	52	51.915	ENSPREG00000016619	rsl1d1	76	43.675	Poecilia_reticulata
ENSMODG00000004625	-	81	44.032	ENSPPYG00000019335	-	81	44.211	Pongo_abelii
ENSMODG00000004625	-	100	44.703	ENSPPYG00000007112	RSL1D1	93	45.455	Pongo_abelii
ENSMODG00000004625	-	81	58.511	ENSPCAG00000011264	-	75	58.511	Procavia_capensis
ENSMODG00000004625	-	73	46.045	ENSPCOG00000022456	RSL1D1	89	47.714	Propithecus_coquereli
ENSMODG00000004625	-	100	47.170	ENSPVAG00000005014	RSL1D1	94	47.170	Pteropus_vampyrus
ENSMODG00000004625	-	52	52.301	ENSPNYG00000002850	rsl1d1	83	45.370	Pundamilia_nyererei
ENSMODG00000004625	-	79	42.432	ENSPNAG00000011848	rsl1d1	94	42.287	Pygocentrus_nattereri
ENSMODG00000004625	-	98	43.074	ENSRNOG00000061236	LOC108348298	89	42.982	Rattus_norvegicus
ENSMODG00000004625	-	98	43.074	ENSRNOG00000048608	Rsl1d1l1	89	42.982	Rattus_norvegicus
ENSMODG00000004625	-	93	45.169	ENSRBIG00000030317	RSL1D1	93	44.864	Rhinopithecus_bieti
ENSMODG00000004625	-	93	45.169	ENSRROG00000033658	RSL1D1	93	44.864	Rhinopithecus_roxellana
ENSMODG00000004625	-	83	40.102	ENSSBOG00000029329	-	88	40.355	Saimiri_boliviensis_boliviensis
ENSMODG00000004625	-	93	46.154	ENSSBOG00000035910	-	93	46.624	Saimiri_boliviensis_boliviensis
ENSMODG00000004625	-	93	41.986	ENSSBOG00000028384	-	94	42.737	Saimiri_boliviensis_boliviensis
ENSMODG00000004625	-	54	51.793	ENSSFOG00015011354	rsl1d1	72	51.793	Scleropages_formosus
ENSMODG00000004625	-	71	43.653	ENSSMAG00000007957	rsl1d1	81	43.558	Scophthalmus_maximus
ENSMODG00000004625	-	53	51.240	ENSSDUG00000008447	rsl1d1	88	41.910	Seriola_dumerili
ENSMODG00000004625	-	53	51.867	ENSSLDG00000008293	rsl1d1	96	41.818	Seriola_lalandi_dorsalis
ENSMODG00000004625	-	99	44.273	ENSSPUG00000007525	RSL1D1	97	44.731	Sphenodon_punctatus
ENSMODG00000004625	-	52	54.852	ENSSPAG00000009755	rsl1d1	84	46.269	Stegastes_partitus
ENSMODG00000004625	-	100	46.285	ENSSSCG00000023984	RSL1D1	93	46.285	Sus_scrofa
ENSMODG00000004625	-	52	60.338	ENSTGUG00000005174	RSL1D1	96	60.338	Taeniopygia_guttata
ENSMODG00000004625	-	54	53.386	ENSTRUG00000016970	rsl1d1	71	53.386	Takifugu_rubripes
ENSMODG00000004625	-	52	51.464	ENSTNIG00000012925	rsl1d1	93	42.063	Tetraodon_nigroviridis
ENSMODG00000004625	-	90	39.120	ENSTBEG00000014678	RSL1D1	100	39.767	Tupaia_belangeri
ENSMODG00000004625	-	100	47.974	ENSTTRG00000011629	RSL1D1	93	47.761	Tursiops_truncatus
ENSMODG00000004625	-	100	46.882	ENSUAMG00000004470	RSL1D1	97	45.199	Ursus_americanus
ENSMODG00000004625	-	93	42.194	ENSUMAG00000003994	RSL1D1	100	42.647	Ursus_maritimus
ENSMODG00000004625	-	100	46.541	ENSVVUG00000018170	-	93	46.541	Vulpes_vulpes
ENSMODG00000004625	-	100	40.389	ENSVVUG00000024962	-	90	40.302	Vulpes_vulpes
ENSMODG00000004625	-	100	44.111	ENSXETG00000033365	-	96	44.681	Xenopus_tropicalis
ENSMODG00000004625	-	54	51.020	ENSXMAG00000025111	rsl1d1	70	51.020	Xiphophorus_maculatus