EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMODG00000004685 (Gene tree)
Gene ID
100009761
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Monodelphis_domestica
Status
putative
Strand
Minus strand
Length
39170 bases
Position
chr2:485803749-485842918
Accession
100009761
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMODP00000039915CSDPF00313.221.3e-8515
ENSMODP00000039915CSDPF00313.221.3e-8525
ENSMODP00000039915CSDPF00313.221.3e-8535
ENSMODP00000039915CSDPF00313.221.3e-8545
ENSMODP00000039915CSDPF00313.221.3e-8555
ENSMODP00000005770CSDPF00313.223.3e-8315
ENSMODP00000005770CSDPF00313.223.3e-8325
ENSMODP00000005770CSDPF00313.223.3e-8335
ENSMODP00000005770CSDPF00313.223.3e-8345
ENSMODP00000005770CSDPF00313.223.3e-8355
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMODT00000043018CSDE1-2022805-ENSMODP00000039915798 (aa)XP_001362186K7E2B4
ENSMODT00000005892CSDE1-2012999-ENSMODP00000005770827 (aa)-F6TRB2
Gene Model
Click here to download ENSMODG00000004685's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000004685's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMODG00000004685CSDE110096.115ENSG00000009307CSDE1100100.000Homo_sapiens
ENSMODG00000004685CSDE110076.951ENSAPOG00000015538csde110078.497Acanthochromis_polyacanthus
ENSMODG00000004685CSDE110091.103ENSAMEG00000017129CSDE19593.661Ailuropoda_melanoleuca
ENSMODG00000004685CSDE19178.378ENSACIG00000015175csde110078.378Amphilophus_citrinellus
ENSMODG00000004685CSDE110077.073ENSAOCG00000011510csde110078.627Amphiprion_ocellaris
ENSMODG00000004685CSDE110078.901ENSAPEG00000007194csde110078.627Amphiprion_percula
ENSMODG00000004685CSDE110075.905ENSATEG00000003864csde110078.238Anabas_testudineus
ENSMODG00000004685CSDE110089.348ENSAPLG00000008797CSDE110092.068Anas_platyrhynchos
ENSMODG00000004685CSDE110093.108ENSACAG00000003120CSDE110093.108Anolis_carolinensis
ENSMODG00000004685CSDE110095.990ENSANAG00000024665CSDE19895.172Aotus_nancymaae
ENSMODG00000004685CSDE18470.070ENSANAG00000028396-9171.429Aotus_nancymaae
ENSMODG00000004685CSDE110078.125ENSACLG00000013296csde110078.125Astatotilapia_calliptera
ENSMODG00000004685CSDE110075.187ENSAMXG00000007436csde110077.361Astyanax_mexicanus
ENSMODG00000004685CSDE110095.739ENSBTAG00000000678CSDE110094.798Bos_taurus
ENSMODG00000004685CSDE110096.115ENSCJAG00000012565CSDE19596.115Callithrix_jacchus
ENSMODG00000004685CSDE19891.954ENSCAFG00000009618CSDE19594.591Canis_familiaris
ENSMODG00000004685CSDE110092.105ENSCAFG00020000481CSDE110095.059Canis_lupus_dingo
ENSMODG00000004685CSDE110095.865ENSCHIG00000017250CSDE110094.928Capra_hircus
ENSMODG00000004685CSDE110096.115ENSTSYG00000003747CSDE110096.115Carlito_syrichta
ENSMODG00000004685CSDE110094.479ENSCAPG00000015128CSDE110094.479Cavia_aperea
ENSMODG00000004685CSDE110090.852ENSCPOG00000040388CSDE110090.852Cavia_porcellus
ENSMODG00000004685CSDE110096.115ENSCCAG00000036794CSDE110096.115Cebus_capucinus
ENSMODG00000004685CSDE19573.020ENSCCAG00000033677-9972.684Cebus_capucinus
ENSMODG00000004685CSDE19770.601ENSCCAG00000030878-9170.601Cebus_capucinus
ENSMODG00000004685CSDE110096.115ENSCATG00000036962CSDE19995.165Cercocebus_atys
ENSMODG00000004685CSDE110095.990ENSCLAG00000006618CSDE110095.990Chinchilla_lanigera
ENSMODG00000004685CSDE110096.115ENSCSAG00000001658CSDE19596.115Chlorocebus_sabaeus
ENSMODG00000004685CSDE19997.087ENSCHOG00000000918CSDE18597.087Choloepus_hoffmanni
ENSMODG00000004685CSDE110093.609ENSCPBG00000016547CSDE110093.609Chrysemys_picta_bellii
ENSMODG00000004685CSDE19743.276ENSCING00000014465-9643.276Ciona_intestinalis
ENSMODG00000004685CSDE19643.300ENSCSAVG00000008100-9843.300Ciona_savignyi
ENSMODG00000004685CSDE110096.115ENSCANG00000035096CSDE19995.165Colobus_angolensis_palliatus
ENSMODG00000004685CSDE19989.871ENSCANG00000031069-9989.871Colobus_angolensis_palliatus
ENSMODG00000004685CSDE110095.363ENSCGRG00001016833-10095.363Cricetulus_griseus_chok1gshd
ENSMODG00000004685CSDE110076.316ENSCGRG00001014011-10079.194Cricetulus_griseus_chok1gshd
ENSMODG00000004685CSDE19383.478ENSCGRG00000005831-10083.478Cricetulus_griseus_crigri
ENSMODG00000004685CSDE19794.878ENSCGRG00000002225-10094.878Cricetulus_griseus_crigri
ENSMODG00000004685CSDE110075.820ENSCSEG00000002620csde110077.562Cynoglossus_semilaevis
ENSMODG00000004685CSDE110078.250ENSCVAG00000001344csde110077.888Cyprinodon_variegatus
ENSMODG00000004685CSDE110079.026ENSDARG00000074758csde110079.026Danio_rerio
ENSMODG00000004685CSDE110093.727ENSDNOG00000010287-9993.727Dasypus_novemcinctus
ENSMODG00000004685CSDE17669.962ENSDNOG00000034464-10073.043Dasypus_novemcinctus
ENSMODG00000004685CSDE110094.862ENSDORG00000011609Csde110094.862Dipodomys_ordii
ENSMODG00000004685CSDE19750.207FBgn0263352Unr7749.197Drosophila_melanogaster
ENSMODG00000004685CSDE17667.384ENSETEG00000007109-9967.384Echinops_telfairi
ENSMODG00000004685CSDE19972.020ENSETEG00000013678-9974.609Echinops_telfairi
ENSMODG00000004685CSDE19080.845ENSETEG00000006280-10084.543Echinops_telfairi
ENSMODG00000004685CSDE19394.220ENSETEG00000002491-7495.087Echinops_telfairi
ENSMODG00000004685CSDE19956.020ENSEBUG00000008647csde19954.286Eptatretus_burgeri
ENSMODG00000004685CSDE110096.241ENSEASG00005006284CSDE110096.241Equus_asinus_asinus
ENSMODG00000004685CSDE110096.241ENSECAG00000020885CSDE110096.241Equus_caballus
ENSMODG00000004685CSDE19298.429ENSEEUG00000006286CSDE16898.429Erinaceus_europaeus
ENSMODG00000004685CSDE110075.483ENSELUG00000015507csde110076.645Esox_lucius
ENSMODG00000004685CSDE110096.115ENSFCAG00000029266CSDE110095.189Felis_catus
ENSMODG00000004685CSDE110092.982ENSFALG00000003407CSDE110092.982Ficedula_albicollis
ENSMODG00000004685CSDE110095.739ENSFDAG00000007882CSDE110095.739Fukomys_damarensis
ENSMODG00000004685CSDE110078.402ENSFHEG00000010799csde110078.402Fundulus_heteroclitus
ENSMODG00000004685CSDE19977.972ENSGMOG00000012731csde110077.972Gadus_morhua
ENSMODG00000004685CSDE19892.967ENSGALG00000002139CSDE19892.967Gallus_gallus
ENSMODG00000004685CSDE19374.527ENSGAFG00000005241csde19577.204Gambusia_affinis
ENSMODG00000004685CSDE19978.875ENSGACG00000004544csde110078.875Gasterosteus_aculeatus
ENSMODG00000004685CSDE110093.734ENSGAGG00000017685CSDE110093.734Gopherus_agassizii
ENSMODG00000004685CSDE110096.115ENSGGOG00000002164CSDE110095.189Gorilla_gorilla
ENSMODG00000004685CSDE110077.488ENSHBUG00000020315csde110077.821Haplochromis_burtoni
ENSMODG00000004685CSDE110082.832ENSHGLG00000003829-10085.436Heterocephalus_glaber_female
ENSMODG00000004685CSDE19977.164ENSHGLG00000000650-9977.164Heterocephalus_glaber_female
ENSMODG00000004685CSDE110079.699ENSHGLG00000019549-10079.699Heterocephalus_glaber_female
ENSMODG00000004685CSDE19986.145ENSHGLG00000008555-10085.224Heterocephalus_glaber_female
ENSMODG00000004685CSDE19980.303ENSHGLG00000007471-9881.782Heterocephalus_glaber_female
ENSMODG00000004685CSDE110086.216ENSHGLG00000009620-10086.466Heterocephalus_glaber_female
ENSMODG00000004685CSDE19686.637ENSHGLG00000010039-10086.637Heterocephalus_glaber_female
ENSMODG00000004685CSDE19981.602ENSHGLG00100002245-9981.602Heterocephalus_glaber_male
ENSMODG00000004685CSDE19686.414ENSHGLG00100006910-10086.414Heterocephalus_glaber_male
ENSMODG00000004685CSDE110078.321ENSHGLG00100012072-10080.754Heterocephalus_glaber_male
ENSMODG00000004685CSDE110095.865ENSHGLG00100019438-10095.865Heterocephalus_glaber_male
ENSMODG00000004685CSDE19978.030ENSHGLG00100007287-9879.423Heterocephalus_glaber_male
ENSMODG00000004685CSDE19778.842ENSHGLG00100004833-10078.842Heterocephalus_glaber_male
ENSMODG00000004685CSDE19477.807ENSHGLG00100004195-10080.389Heterocephalus_glaber_male
ENSMODG00000004685CSDE110074.561ENSHGLG00100001846-10076.623Heterocephalus_glaber_male
ENSMODG00000004685CSDE110077.000ENSHCOG00000004158csde110076.654Hippocampus_comes
ENSMODG00000004685CSDE110075.062ENSIPUG00000000355csde110077.361Ictalurus_punctatus
ENSMODG00000004685CSDE19291.608ENSSTOG00000032722-9991.608Ictidomys_tridecemlineatus
ENSMODG00000004685CSDE110077.792ENSSTOG00000030994-10077.792Ictidomys_tridecemlineatus
ENSMODG00000004685CSDE110095.238ENSJJAG00000019571Csde110095.238Jaculus_jaculus
ENSMODG00000004685CSDE110077.640ENSKMAG00000005685csde110077.256Kryptolebias_marmoratus
ENSMODG00000004685CSDE110076.463ENSLBEG00000014770csde110077.979Labrus_bergylta
ENSMODG00000004685CSDE110081.762ENSLACG00000018452CSDE19481.762Latimeria_chalumnae
ENSMODG00000004685CSDE110081.602ENSLOCG00000010413csde19481.602Lepisosteus_oculatus
ENSMODG00000004685CSDE110091.103ENSLAFG00000007150CSDE19993.985Loxodonta_africana
ENSMODG00000004685CSDE110096.115ENSMFAG00000003674CSDE110095.189Macaca_fascicularis
ENSMODG00000004685CSDE110096.115ENSMMUG00000001974CSDE110095.189Macaca_mulatta
ENSMODG00000004685CSDE110096.115ENSMNEG00000045247CSDE19995.165Macaca_nemestrina
ENSMODG00000004685CSDE110095.865ENSMLEG00000038673CSDE19595.865Mandrillus_leucophaeus
ENSMODG00000004685CSDE110077.561ENSMAMG00000008821csde110079.016Mastacembelus_armatus
ENSMODG00000004685CSDE110078.125ENSMZEG00005021675csde110077.821Maylandia_zebra
ENSMODG00000004685CSDE19893.095ENSMGAG00000016381CSDE110091.818Meleagris_gallopavo
ENSMODG00000004685CSDE110095.363ENSMAUG00000014031Csde110095.363Mesocricetus_auratus
ENSMODG00000004685CSDE110095.489ENSMICG00000002050CSDE19995.312Microcebus_murinus
ENSMODG00000004685CSDE110095.363ENSMOCG00000018960Csde110095.363Microtus_ochrogaster
ENSMODG00000004685CSDE110076.155ENSMMOG00000015075csde110078.497Mola_mola
ENSMODG00000004685CSDE110076.155ENSMALG00000007132csde110078.497Monopterus_albus
ENSMODG00000004685CSDE110095.238MGP_CAROLIEiJ_G0025444Csde110095.238Mus_caroli
ENSMODG00000004685CSDE110095.238ENSMUSG00000068823Csde110095.238Mus_musculus
ENSMODG00000004685CSDE110095.489MGP_PahariEiJ_G0026888Csde110095.489Mus_pahari
ENSMODG00000004685CSDE110095.489MGP_SPRETEiJ_G0026394Csde110095.489Mus_spretus
ENSMODG00000004685CSDE19896.041ENSMPUG00000005753CSDE19996.041Mustela_putorius_furo
ENSMODG00000004685CSDE110091.479ENSMLUG00000005681CSDE19594.049Myotis_lucifugus
ENSMODG00000004685CSDE19767.929ENSNGAG00000012599-10067.929Nannospalax_galili
ENSMODG00000004685CSDE110095.363ENSNGAG00000021929Csde110095.363Nannospalax_galili
ENSMODG00000004685CSDE110075.500ENSNBRG00000020808csde110077.821Neolamprologus_brichardi
ENSMODG00000004685CSDE110095.990ENSNLEG00000004842CSDE19995.038Nomascus_leucogenys
ENSMODG00000004685CSDE19899.188ENSMEUG00000002677CSDE19699.188Notamacropus_eugenii
ENSMODG00000004685CSDE19897.087ENSOPRG00000005002CSDE17697.087Ochotona_princeps
ENSMODG00000004685CSDE19765.487ENSODEG00000005979-9865.487Octodon_degus
ENSMODG00000004685CSDE110095.489ENSODEG00000007383-10095.489Octodon_degus
ENSMODG00000004685CSDE110076.313ENSONIG00000009309csde110076.313Oreochromis_niloticus
ENSMODG00000004685CSDE110081.796ENSOANG00000003346-10081.796Ornithorhynchus_anatinus
ENSMODG00000004685CSDE110095.614ENSOCUG00000016438CSDE19993.390Oryctolagus_cuniculus
ENSMODG00000004685CSDE110076.313ENSORLG00000000707csde110077.951Oryzias_latipes
ENSMODG00000004685CSDE110078.125ENSORLG00020005148csde110076.313Oryzias_latipes_hni
ENSMODG00000004685CSDE110078.125ENSORLG00015019415csde110077.951Oryzias_latipes_hsok
ENSMODG00000004685CSDE110078.402ENSOMEG00000015656csde110078.238Oryzias_melastigma
ENSMODG00000004685CSDE110092.231ENSOGAG00000012127CSDE19594.825Otolemur_garnettii
ENSMODG00000004685CSDE110091.980ENSOARG00000020034CSDE19594.567Ovis_aries
ENSMODG00000004685CSDE110096.115ENSPPAG00000025861CSDE110095.189Pan_paniscus
ENSMODG00000004685CSDE110096.115ENSPPRG00000006747CSDE19596.115Panthera_pardus
ENSMODG00000004685CSDE110096.115ENSPTIG00000015468CSDE110096.115Panthera_tigris_altaica
ENSMODG00000004685CSDE110096.115ENSPTRG00000033721CSDE110096.115Pan_troglodytes
ENSMODG00000004685CSDE110096.115ENSPANG00000018873CSDE110095.189Papio_anubis
ENSMODG00000004685CSDE110075.750ENSPKIG00000009459csde110077.951Paramormyrops_kingsleyae
ENSMODG00000004685CSDE19696.460ENSPSIG00000003823CSDE19696.460Pelodiscus_sinensis
ENSMODG00000004685CSDE110075.655ENSPMGG00000000772csde110077.850Periophthalmus_magnuspinnatus
ENSMODG00000004685CSDE110095.614ENSPEMG00000020357-10095.614Peromyscus_maniculatus_bairdii
ENSMODG00000004685CSDE110099.624ENSPCIG00000022587CSDE110099.624Phascolarctos_cinereus
ENSMODG00000004685CSDE19976.863ENSPFOG00000012664csde110077.329Poecilia_formosa
ENSMODG00000004685CSDE19772.811ENSPLAG00000017680csde19372.811Poecilia_latipinna
ENSMODG00000004685CSDE19872.534ENSPMEG00000005094csde19672.534Poecilia_mexicana
ENSMODG00000004685CSDE110077.640ENSPREG00000011631csde110075.390Poecilia_reticulata
ENSMODG00000004685CSDE110095.990ENSPPYG00000000996CSDE110095.990Pongo_abelii
ENSMODG00000004685CSDE110098.058ENSPCAG00000014368CSDE19098.058Procavia_capensis
ENSMODG00000004685CSDE19081.343ENSPCOG00000008223-9081.343Propithecus_coquereli
ENSMODG00000004685CSDE110095.865ENSPCOG00000017893CSDE110095.865Propithecus_coquereli
ENSMODG00000004685CSDE110086.341ENSPVAG00000008225CSDE19588.745Pteropus_vampyrus
ENSMODG00000004685CSDE110077.488ENSPNYG00000013745csde110077.821Pundamilia_nyererei
ENSMODG00000004685CSDE110078.652ENSPNAG00000001958csde110078.238Pygocentrus_nattereri
ENSMODG00000004685CSDE110095.363ENSRNOG00000061058Csde110095.363Rattus_norvegicus
ENSMODG00000004685CSDE110090.613ENSRBIG00000038966-9490.613Rhinopithecus_bieti
ENSMODG00000004685CSDE110092.231ENSRBIG00000038088-9994.009Rhinopithecus_bieti
ENSMODG00000004685CSDE110096.115ENSRROG00000043101CSDE19995.165Rhinopithecus_roxellana
ENSMODG00000004685CSDE110096.115ENSSBOG00000035592CSDE19596.115Saimiri_boliviensis_boliviensis
ENSMODG00000004685CSDE110095.614ENSSHAG00000009831CSDE110098.440Sarcophilus_harrisii
ENSMODG00000004685CSDE110077.985ENSSFOG00015007498csde110078.234Scleropages_formosus
ENSMODG00000004685CSDE110077.073ENSSMAG00000007203csde110078.756Scophthalmus_maximus
ENSMODG00000004685CSDE110076.829ENSSDUG00000015380csde110078.368Seriola_dumerili
ENSMODG00000004685CSDE110078.652ENSSLDG00000008819csde110078.652Seriola_lalandi_dorsalis
ENSMODG00000004685CSDE110091.855ENSSARG00000000738CSDE19595.343Sorex_araneus
ENSMODG00000004685CSDE110093.108ENSSPUG00000008714CSDE110093.108Sphenodon_punctatus
ENSMODG00000004685CSDE110079.026ENSSPAG00000000716csde110078.756Stegastes_partitus
ENSMODG00000004685CSDE110096.115ENSSSCG00000006752CSDE110095.189Sus_scrofa
ENSMODG00000004685CSDE110092.125ENSTGUG00000000972CSDE110092.125Taeniopygia_guttata
ENSMODG00000004685CSDE110073.125ENSTRUG00000007996csde110075.227Takifugu_rubripes
ENSMODG00000004685CSDE19383.270ENSTNIG00000010878csde110083.270Tetraodon_nigroviridis
ENSMODG00000004685CSDE19397.436ENSTBEG00000011880-6197.436Tupaia_belangeri
ENSMODG00000004685CSDE110091.479ENSTTRG00000015583CSDE19594.049Tursiops_truncatus
ENSMODG00000004685CSDE19086.656ENSUAMG00000024289-9989.888Ursus_americanus
ENSMODG00000004685CSDE18995.440ENSUAMG00000021779-10094.569Ursus_americanus
ENSMODG00000004685CSDE19795.487ENSUMAG00000011714-9995.487Ursus_maritimus
ENSMODG00000004685CSDE110085.088ENSUMAG00000009720-9887.773Ursus_maritimus
ENSMODG00000004685CSDE110097.183ENSVPAG00000000749CSDE17997.183Vicugna_pacos
ENSMODG00000004685CSDE19095.468ENSVVUG00000009890CSDE19495.468Vulpes_vulpes
ENSMODG00000004685CSDE110087.765ENSXETG00000021448csde110087.765Xenopus_tropicalis
ENSMODG00000004685CSDE19285.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSMODG00000004685CSDE110078.875ENSXMAG00000009080csde110076.699Xiphophorus_maculatus

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